RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 NPHP1O15259 732 aa11.14□□□□□ -0.63
TRAPPC1-203ENST00000571739 DDX58O95786 925 aaKnown RBP11.14□□□□□ -0.63
TRAPPC1-203ENST00000571739 IGKV5-2P06315 115 aa11.14□□□□□ -0.63
TRAPPC1-203ENST00000571739 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
TRAPPC1-203ENST00000571739 SSH1Q8WYL5 1049 aa11.14□□□□□ -0.63
TRAPPC1-203ENST00000571739 ANKRD31Q8N7Z5 1873 aa11.14□□□□□ -0.63
TRAPPC1-203ENST00000571739 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
TRAPPC1-203ENST00000571739 F6X3S4 739 aa11.13□□□□□ -0.63
TRAPPC1-203ENST00000571739 GRIN3BO60391 1043 aa11.13□□□□□ -0.63
TRAPPC1-203ENST00000571739 DALRD3Q5D0E6 543 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-203ENST00000571739 JARID2Q92833 1246 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC1-203ENST00000571739 ZNF622Q969S3 477 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRAPPC1-203ENST00000571739 FAM89AQ96GI7 184 aa11.13□□□□□ -0.63
TRAPPC1-203ENST00000571739 TRMT112Q9UI30 125 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-203ENST00000571739 PDZRN3Q9UPQ7 1066 aa11.13□□□□□ -0.63
TRAPPC1-203ENST00000571739 IBTKQ9P2D0 1353 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC1-203ENST00000571739 HCLS1P14317 486 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC1-203ENST00000571739 FKBP5Q13451 457 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC1-203ENST00000571739 CWF19L2Q2TBE0 894 aaKnown RBP11.12□□□□□ -0.63
TRAPPC1-203ENST00000571739 CRY2Q49AN0 593 aa11.12□□□□□ -0.63
TRAPPC1-203ENST00000571739 RTL5Q5HYW3 569 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC1-203ENST00000571739 TTLL6Q8N841 843 aa11.12□□□□□ -0.63
TRAPPC1-203ENST00000571739 CCDC191Q8NCU4 936 aa11.12□□□□□ -0.63
TRAPPC1-203ENST00000571739 MASTLQ96GX5 879 aa11.12□□□□□ -0.63
TRAPPC1-203ENST00000571739 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
TRAPPC1-203ENST00000571739 ZBED9Q6R2W3 1325 aa11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 SH3TC1Q8TE82 1336 aa11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 CACNA1FO60840 1977 aa11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 NEURL1BA8MQ27 555 aa11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 CT47B1P0C2W7 299 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 NPR1P16066 1061 aa11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 ALDH1L2Q3SY69 923 aa11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 STYK1Q6J9G0 422 aa11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 C7orf43Q8WVR3 580 aa11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 DNAAF4Q8WXU2 420 aa11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 NLRP3Q96P20 1036 aa11.11□□□□□ -0.63
TRAPPC1-203ENST00000571739 BRCA1P38398 1863 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-203ENST00000571739 H7C1W4 665 aa11.1□□□□□ -0.63
TRAPPC1-203ENST00000571739 HOXA10P31260 410 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-203ENST00000571739 RARSP54136 660 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-203ENST00000571739 BEND3Q5T5X7 828 aa11.1□□□□□ -0.63
TRAPPC1-203ENST00000571739 ZBTB38Q8NAP3 1195 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-203ENST00000571739 CNKSR1Q969H4 720 aa11.1□□□□□ -0.63
TRAPPC1-203ENST00000571739 CWC25Q9NXE8 425 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-203ENST00000571739 ARFGEF2Q9Y6D5 1785 aa11.1□□□□□ -0.63
TRAPPC1-203ENST00000571739 RNF123Q5XPI4 1314 aa11.09□□□□□ -0.63
TRAPPC1-203ENST00000571739 ANKRD36CQ5JPF3 1778 aa11.09□□□□□ -0.63
TRAPPC1-203ENST00000571739 PCCAP05165 728 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC1-203ENST00000571739 ARHGAP27Q6ZUM4 889 aa11.09□□□□□ -0.63
TRAPPC1-203ENST00000571739 LINS1Q8NG48 757 aa11.09□□□□□ -0.63
TRAPPC1-203ENST00000571739 ZNF219Q9P2Y4 722 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC1-203ENST00000571739 RIC1Q4ADV7 1423 aa11.09□□□□□ -0.63
TRAPPC1-203ENST00000571739 IRS4O14654 1257 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 C21orf2O43822 256 aa11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 ALDH1B1P30837 517 aa11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 CASP7P55210 303 aa11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 NEXNQ0ZGT2 675 aa11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 GCKRQ14397 625 aa11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 SF3B3Q15393 1217 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 PRPF40BQ6NWY9 871 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 OLFM4Q6UX06 510 aa11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 NOB1Q9ULX3 412 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 TNRC6CQ9HCJ0 1690 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-203ENST00000571739 SLX4Q8IY92 1834 aa11.07□□□□□ -0.64
TRAPPC1-203ENST00000571739 COL11A2P13942 1736 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC1-203ENST00000571739 BCAR3O75815 825 aa11.07□□□□□ -0.64
TRAPPC1-203ENST00000571739 PRELPP51888 382 aa11.07□□□□□ -0.64
TRAPPC1-203ENST00000571739 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
TRAPPC1-203ENST00000571739 RPGRQ92834 1020 aaKnown RBP11.07□□□□□ -0.64
TRAPPC1-203ENST00000571739 RBM17Q96I25 401 aaKnown RBP11.07□□□□□ -0.64
TRAPPC1-203ENST00000571739 CRAMP1Q96RY5 1269 aa11.07□□□□□ -0.64
TRAPPC1-203ENST00000571739 SMC4Q9NTJ3 1288 aa11.07□□□□□ -0.64
TRAPPC1-203ENST00000571739 DLEC1Q9Y238 1755 aa11.06□□□□□ -0.64
TRAPPC1-203ENST00000571739 PDE8AO60658 829 aa11.06□□□□□ -0.64
TRAPPC1-203ENST00000571739 SLC4A10Q6U841 1118 aa11.06□□□□□ -0.64
TRAPPC1-203ENST00000571739 PTPRCP08575 1304 aa11.06□□□□□ -0.64
TRAPPC1-203ENST00000571739 CDHR2Q9BYE9 1310 aa11.06□□□□□ -0.64
TRAPPC1-203ENST00000571739 NFKBIEO00221 500 aa11.05□□□□□ -0.64
TRAPPC1-203ENST00000571739 YY1P25490 414 aa11.05□□□□□ -0.64
TRAPPC1-203ENST00000571739 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
TRAPPC1-203ENST00000571739 SRCIN1Q9C0H9 1055 aa11.05□□□□□ -0.64
TRAPPC1-203ENST00000571739 ABCC4O15439 1325 aa11.05□□□□□ -0.64
TRAPPC1-203ENST00000571739 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
TRAPPC1-203ENST00000571739 ALDH1L1O75891 902 aa11.04□□□□□ -0.64
TRAPPC1-203ENST00000571739 BBOX1O75936 387 aa11.04□□□□□ -0.64
TRAPPC1-203ENST00000571739 RASSF7Q02833 373 aa11.04□□□□□ -0.64
TRAPPC1-203ENST00000571739 TTLL11Q8NHH1 800 aa11.04□□□□□ -0.64
TRAPPC1-203ENST00000571739 CELF1Q92879 486 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-203ENST00000571739 PLA2G12BQ9BX93 195 aa11.04□□□□□ -0.64
TRAPPC1-203ENST00000571739 SEC31BQ9NQW1 1179 aa11.04□□□□□ -0.64
TRAPPC1-203ENST00000571739 TNNQ9UQP3 1299 aa11.04□□□□□ -0.64
TRAPPC1-203ENST00000571739 DDX60Q8IY21 1712 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-203ENST00000571739 CSF1RP07333 972 aa11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 NBPF7P0C2Y1 421 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 FOXO4P98177 505 aa11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 GRAPQ13588 217 aa11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 EPHA10Q5JZY3 1008 aa11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
TRAPPC1-203ENST00000571739 SP8Q8IXZ3 490 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms