RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 PLBD2Q8NHP8 589 aa21.39■■□□□ 1.01
RPAIN-208ENST00000571043 GSPT1P15170 499 aaKnown RBP21.38■■□□□ 1.01
RPAIN-208ENST00000571043 ADRA2BP18089 450 aa21.38■■□□□ 1.01
RPAIN-208ENST00000571043 SSFA2P28290 1259 aa21.38■■□□□ 1.01
RPAIN-208ENST00000571043 TRAPPC3LQ5T215 181 aa21.38■■□□□ 1.01
RPAIN-208ENST00000571043 PPP1R42Q7Z4L9 355 aa21.38■■□□□ 1.01
RPAIN-208ENST00000571043 DZIP3Q86Y13 1208 aaKnown RBP21.38■■□□□ 1.01
RPAIN-208ENST00000571043 C9orf78Q9NZ63 289 aaPredicted RBP21.38■■□□□ 1.01
RPAIN-208ENST00000571043 TBC1D2BQ9UPU7 963 aa21.38■■□□□ 1.01
RPAIN-208ENST00000571043 EXOC6BQ9Y2D4 811 aa21.38■■□□□ 1.01
RPAIN-208ENST00000571043 APBB1O00213 710 aa21.37■■□□□ 1.01
RPAIN-208ENST00000571043 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
RPAIN-208ENST00000571043 ARHGEF1Q92888 912 aaKnown RBP21.37■■□□□ 1.01
RPAIN-208ENST00000571043 MAP3K15Q6ZN16 1313 aa21.37■■□□□ 1.01
RPAIN-208ENST00000571043 ERVV-1B6SEH8 477 aa21.36■■□□□ 1.01
RPAIN-208ENST00000571043 CDC45O75419 566 aa21.36■■□□□ 1.01
RPAIN-208ENST00000571043 MFAP1P55081 439 aaKnown RBP21.36■■□□□ 1.01
RPAIN-208ENST00000571043 NEXNQ0ZGT2 675 aa21.36■■□□□ 1.01
RPAIN-208ENST00000571043 SLC15A2Q16348 729 aa21.36■■□□□ 1.01
RPAIN-208ENST00000571043 KIF6Q6ZMV9 814 aa21.36■■□□□ 1.01
RPAIN-208ENST00000571043 ARXQ96QS3 562 aa21.36■■□□□ 1.01
RPAIN-208ENST00000571043 METTL22Q9BUU2 404 aaPredicted RBP21.36■■□□□ 1.01
RPAIN-208ENST00000571043 C22orf23Q9BZE7 217 aa21.36■■□□□ 1.01
RPAIN-208ENST00000571043 TFCP2L1Q9NZI6 479 aa21.36■■□□□ 1.01
RPAIN-208ENST00000571043 DAXXQ9UER7 740 aaPredicted RBP21.36■■□□□ 1.01
RPAIN-208ENST00000571043 NUP98P52948 1817 aa21.36■■□□□ 1.01
RPAIN-208ENST00000571043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.35■■□□□ 1.01
RPAIN-208ENST00000571043 OTUD7AQ8TE49 926 aaPredicted RBP21.35■■□□□ 1.01
RPAIN-208ENST00000571043 ANO8Q9HCE9 1232 aaPredicted RBP21.35■■□□□ 1.01
RPAIN-208ENST00000571043 GRM8O00222 908 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 SRGAP3O43295 1099 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 CWF19L2Q2TBE0 894 aaKnown RBP21.34■■□□□ 1.01
RPAIN-208ENST00000571043 HSP90AB4PQ58FF6 505 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 ZBTB3Q9H5J0 574 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 STK32BQ9NY57 414 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 NARFQ9UHQ1 456 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 TUBGCP6Q96RT7 1819 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 ARFGEF2Q9Y6D5 1785 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 RGL2O15211 777 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 CAMTA2O94983 1202 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 IGKV5-2P06315 115 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 TBC1D9Q6ZT07 1266 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 FLAD1Q8NFF5 587 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 SALL3Q9BXA9 1300 aa21.34■■□□□ 1.01
RPAIN-208ENST00000571043 PHF14O94880 888 aa21.33■■□□□ 1
RPAIN-208ENST00000571043 RFC4P35249 363 aa21.33■■□□□ 1
RPAIN-208ENST00000571043 PDE1AP54750 535 aa21.33■■□□□ 1
RPAIN-208ENST00000571043 GIGYF2Q6Y7W6 1299 aaKnown RBP21.33■■□□□ 1
RPAIN-208ENST00000571043 NEURL1BA8MQ27 555 aa21.32■■□□□ 1
RPAIN-208ENST00000571043 C4AP0C0L4 1744 aa21.32■■□□□ 1
RPAIN-208ENST00000571043 BECN1Q14457 450 aa21.32■■□□□ 1
RPAIN-208ENST00000571043 HLFQ16534 295 aa21.32■■□□□ 1
RPAIN-208ENST00000571043 CLEC4GQ6UXB4 293 aa21.32■■□□□ 1
RPAIN-208ENST00000571043 QSER1Q2KHR3 1735 aa21.31■■□□□ 1
RPAIN-208ENST00000571043 ZPR1O75312 459 aa21.31■■□□□ 1
RPAIN-208ENST00000571043 SURF6O75683 361 aaKnown RBP21.31■■□□□ 1
RPAIN-208ENST00000571043 RBM25P49756 843 aaKnown RBP21.31■■□□□ 1
RPAIN-208ENST00000571043 TCIRG1Q13488 830 aa21.31■■□□□ 1
RPAIN-208ENST00000571043 STAP2Q9UGK3 403 aa21.31■■□□□ 1
RPAIN-208ENST00000571043 PNPLA7Q6ZV29 1317 aa21.3■■□□□ 1
RPAIN-208ENST00000571043 USP42Q9H9J4 1324 aaKnown RBP21.3■■□□□ 1
RPAIN-208ENST00000571043 COL23A1Q86Y22 540 aaPredicted RBP21.3■■□□□ 1
RPAIN-208ENST00000571043 KIF1BPQ96EK5 621 aa21.3■■□□□ 1
RPAIN-208ENST00000571043 BCORQ6W2J9 1755 aa21.3■■□□□ 1
RPAIN-208ENST00000571043 AOX1Q06278 1338 aa21.3■■□□□ 1
RPAIN-208ENST00000571043 SDSP20132 328 aa21.29■■□□□ 1
RPAIN-208ENST00000571043 GCKRQ14397 625 aa21.29■■□□□ 1
RPAIN-208ENST00000571043 HSP90AB3PQ58FF7 597 aa21.29■■□□□ 1
RPAIN-208ENST00000571043 USPL1Q5W0Q7 1092 aa21.29■■□□□ 1
RPAIN-208ENST00000571043 MYD88Q99836 296 aa21.29■■□□□ 1
RPAIN-208ENST00000571043 MX1P20591 662 aa21.29■■□□□ 1
RPAIN-208ENST00000571043 RHPN1Q8TCX5 695 aa21.29■■□□□ 1
RPAIN-208ENST00000571043 SUCLG2Q96I99 432 aa21.29■■□□□ 1
RPAIN-208ENST00000571043 BCL2L12Q9HB09 334 aa21.29■■□□□ 1
RPAIN-208ENST00000571043 SRP68Q9UHB9 627 aaKnown RBP21.29■■□□□ 1
RPAIN-208ENST00000571043 TRIM28Q13263 835 aaKnown RBP21.28■■□□□ 1
RPAIN-208ENST00000571043 ZNF652Q9Y2D9 606 aa21.28■■□□□ 1
RPAIN-208ENST00000571043 CASC1Q6TDU7 716 aa21.27■■□□□ 1
RPAIN-208ENST00000571043 ISCA1Q9BUE6 129 aa21.27■■□□□ 1
RPAIN-208ENST00000571043 BCL11AQ9H165 835 aa21.27■■□□□ 1
RPAIN-208ENST00000571043 SCN7AQ01118 1682 aa21.26■□□□□ 0.99
RPAIN-208ENST00000571043 ZNF34Q8IZ26 560 aa21.26■□□□□ 0.99
RPAIN-208ENST00000571043 KAZALD1Q96I82 304 aa21.26■□□□□ 0.99
RPAIN-208ENST00000571043 ANKRD36CQ5JPF3 1778 aa21.26■□□□□ 0.99
RPAIN-208ENST00000571043 ATP5J2-PTCD1G3V325 749 aa21.25■□□□□ 0.99
RPAIN-208ENST00000571043 GYS1P13807 737 aa21.25■□□□□ 0.99
RPAIN-208ENST00000571043 SLC4A3P48751 1232 aa21.25■□□□□ 0.99
RPAIN-208ENST00000571043 ERC1Q8IUD2 1116 aa21.25■□□□□ 0.99
RPAIN-208ENST00000571043 CCDC191Q8NCU4 936 aa21.24■□□□□ 0.99
RPAIN-208ENST00000571043 AFDNP55196 1824 aaKnown RBP21.24■□□□□ 0.99
RPAIN-208ENST00000571043 BICC1Q9H694 974 aaKnown RBP21.24■□□□□ 0.99
RPAIN-208ENST00000571043 IL1RAPL2Q9NP60 686 aa21.23■□□□□ 0.99
RPAIN-208ENST00000571043 TBC1D9BQ66K14 1250 aa21.22■□□□□ 0.99
RPAIN-208ENST00000571043 NLRP10Q86W26 655 aa21.22■□□□□ 0.99
RPAIN-208ENST00000571043 GPTP24298 496 aa21.21■□□□□ 0.99
RPAIN-208ENST00000571043 OS9Q13438 667 aaPredicted RBP21.21■□□□□ 0.99
RPAIN-208ENST00000571043 NLGN1Q8N2Q7 840 aa21.21■□□□□ 0.99
RPAIN-208ENST00000571043 CWC25Q9NXE8 425 aaPredicted RBP21.21■□□□□ 0.99
RPAIN-208ENST00000571043 NIP7Q9Y221 180 aaKnown RBP eCLIP21.21■□□□□ 0.99
RPAIN-208ENST00000571043 UBN2Q6ZU65 1347 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms