RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 STYK1Q6J9G0 422 aa16.36■□□□□ 0.21
TVP23B-204ENST00000571018 PPP1R42Q7Z4L9 355 aa16.36■□□□□ 0.21
TVP23B-204ENST00000571018 MASTLQ96GX5 879 aa16.36■□□□□ 0.21
TVP23B-204ENST00000571018 NTSR2O95665 410 aa16.35■□□□□ 0.21
TVP23B-204ENST00000571018 TWISTNBQ3B726 338 aaPredicted RBP16.35■□□□□ 0.21
TVP23B-204ENST00000571018 ERFEQ4G0M1 354 aa16.35■□□□□ 0.21
TVP23B-204ENST00000571018 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
TVP23B-204ENST00000571018 CNKSR1Q969H4 720 aa16.35■□□□□ 0.21
TVP23B-204ENST00000571018 FANCIQ9NVI1 1328 aa16.35■□□□□ 0.21
TVP23B-204ENST00000571018 COL11A2P13942 1736 aaPredicted RBP16.34■□□□□ 0.21
TVP23B-204ENST00000571018 PHAXQ9H814 394 aaKnown RBP16.34■□□□□ 0.21
TVP23B-204ENST00000571018 NPR1P16066 1061 aa16.33■□□□□ 0.2
TVP23B-204ENST00000571018 GOLGA2Q08379 1002 aa16.33■□□□□ 0.2
TVP23B-204ENST00000571018 NLRP10Q86W26 655 aa16.33■□□□□ 0.2
TVP23B-204ENST00000571018 UTP14AQ9BVJ6 771 aaKnown RBP16.33■□□□□ 0.2
TVP23B-204ENST00000571018 ZNF521Q96K83 1311 aa16.33■□□□□ 0.2
TVP23B-204ENST00000571018 ADCY9O60503 1353 aa16.33■□□□□ 0.2
TVP23B-204ENST00000571018 ABCC12Q96J65 1359 aa16.33■□□□□ 0.2
TVP23B-204ENST00000571018 RIC1Q4ADV7 1423 aa16.33■□□□□ 0.2
TVP23B-204ENST00000571018 UTRNP46939 3433 aa16.33■□□□□ 0.2
TVP23B-204ENST00000571018 CRY2Q49AN0 593 aa16.32■□□□□ 0.2
TVP23B-204ENST00000571018 SLC10A5Q5PT55 438 aa16.32■□□□□ 0.2
TVP23B-204ENST00000571018 RNF123Q5XPI4 1314 aa16.32■□□□□ 0.2
TVP23B-204ENST00000571018 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
TVP23B-204ENST00000571018 ISCA1Q9BUE6 129 aa16.32■□□□□ 0.2
TVP23B-204ENST00000571018 ANKRD36CQ5JPF3 1778 aa16.31■□□□□ 0.2
TVP23B-204ENST00000571018 PRPF40BQ6NWY9 871 aaKnown RBP16.31■□□□□ 0.2
TVP23B-204ENST00000571018 STK31Q9BXU1 1019 aa16.31■□□□□ 0.2
TVP23B-204ENST00000571018 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
TVP23B-204ENST00000571018 GOLGB1Q14789 3259 aaKnown RBP16.31■□□□□ 0.2
TVP23B-204ENST00000571018 C21orf2O43822 256 aa16.3■□□□□ 0.2
TVP23B-204ENST00000571018 VAMP4O75379 141 aa16.3■□□□□ 0.2
TVP23B-204ENST00000571018 EXOSC9Q06265 439 aaKnown RBP16.3■□□□□ 0.2
TVP23B-204ENST00000571018 TRIM28Q13263 835 aaKnown RBP16.3■□□□□ 0.2
TVP23B-204ENST00000571018 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
TVP23B-204ENST00000571018 DDX58O95786 925 aaKnown RBP16.29■□□□□ 0.2
TVP23B-204ENST00000571018 ALDH1B1P30837 517 aa16.29■□□□□ 0.2
TVP23B-204ENST00000571018 C7orf43Q8WVR3 580 aa16.29■□□□□ 0.2
TVP23B-204ENST00000571018 TRMT112Q9UI30 125 aaKnown RBP16.29■□□□□ 0.2
TVP23B-204ENST00000571018 TNRC6CQ9HCJ0 1690 aaKnown RBP16.29■□□□□ 0.2
TVP23B-204ENST00000571018 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
TVP23B-204ENST00000571018 ATP5J2-PTCD1G3V325 749 aa16.28■□□□□ 0.2
TVP23B-204ENST00000571018 NFKBIEO00221 500 aa16.28■□□□□ 0.2
TVP23B-204ENST00000571018 TCERG1O14776 1098 aaKnown RBP16.28■□□□□ 0.2
TVP23B-204ENST00000571018 HOXA10P31260 410 aaPredicted RBP16.28■□□□□ 0.2
TVP23B-204ENST00000571018 SOGA3Q5TF21 947 aa16.28■□□□□ 0.2
TVP23B-204ENST00000571018 C9orf131Q5VYM1 1079 aa16.28■□□□□ 0.2
TVP23B-204ENST00000571018 NLRP3Q96P20 1036 aa16.28■□□□□ 0.2
TVP23B-204ENST00000571018 SLX4Q8IY92 1834 aa16.27■□□□□ 0.2
TVP23B-204ENST00000571018 RASSF7Q02833 373 aa16.27■□□□□ 0.2
TVP23B-204ENST00000571018 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.2
TVP23B-204ENST00000571018 MIER1Q8N108 512 aa16.27■□□□□ 0.2
TVP23B-204ENST00000571018 SYNE4Q8N205 404 aa16.27■□□□□ 0.2
TVP23B-204ENST00000571018 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.2
TVP23B-204ENST00000571018 ARFGEF2Q9Y6D5 1785 aa16.27■□□□□ 0.2
TVP23B-204ENST00000571018 LMNB1P20700 586 aa16.26■□□□□ 0.19
TVP23B-204ENST00000571018 PRELPP51888 382 aa16.26■□□□□ 0.19
TVP23B-204ENST00000571018 KSR2Q6VAB6 950 aa16.26■□□□□ 0.19
TVP23B-204ENST00000571018 G2E3Q7L622 706 aa16.26■□□□□ 0.19
TVP23B-204ENST00000571018 CRAMP1Q96RY5 1269 aa16.26■□□□□ 0.19
TVP23B-204ENST00000571018 METTL22Q9BUU2 404 aaPredicted RBP16.26■□□□□ 0.19
TVP23B-204ENST00000571018 RNF181Q9P0P0 153 aa16.26■□□□□ 0.19
TVP23B-204ENST00000571018 LTBP3Q9NS15 1303 aa16.25■□□□□ 0.19
TVP23B-204ENST00000571018 PI4KAP2A4QPH2 592 aa16.25■□□□□ 0.19
TVP23B-204ENST00000571018 PI4KAP1Q8N8J0 262 aa16.25■□□□□ 0.19
TVP23B-204ENST00000571018 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
TVP23B-204ENST00000571018 MYD88Q99836 296 aa16.25■□□□□ 0.19
TVP23B-204ENST00000571018 MAP3K2Q9Y2U5 619 aa16.25■□□□□ 0.19
TVP23B-204ENST00000571018 E9PSI1 815 aa16.24■□□□□ 0.19
TVP23B-204ENST00000571018 HCLS1P14317 486 aaPredicted RBP16.24■□□□□ 0.19
TVP23B-204ENST00000571018 CCDC93Q567U6 631 aa16.24■□□□□ 0.19
TVP23B-204ENST00000571018 CCDC191Q8NCU4 936 aa16.24■□□□□ 0.19
TVP23B-204ENST00000571018 ZNF428Q96B54 188 aa16.24■□□□□ 0.19
TVP23B-204ENST00000571018 FAM89AQ96GI7 184 aa16.24■□□□□ 0.19
TVP23B-204ENST00000571018 GPBP1L1Q9HC44 474 aaPredicted RBP16.24■□□□□ 0.19
TVP23B-204ENST00000571018 SBF1O95248 1867 aa16.23■□□□□ 0.19
TVP23B-204ENST00000571018 CACNA1SQ13698 1873 aa16.23■□□□□ 0.19
TVP23B-204ENST00000571018 SLFN5Q08AF3 891 aa16.23■□□□□ 0.19
TVP23B-204ENST00000571018 FLIIQ13045 1269 aa16.23■□□□□ 0.19
TVP23B-204ENST00000571018 ZNF526Q8TF50 670 aaPredicted RBP16.23■□□□□ 0.19
TVP23B-204ENST00000571018 TAOK3Q9H2K8 898 aa16.23■□□□□ 0.19
TVP23B-204ENST00000571018 FER1L6Q2WGJ9 1857 aa16.22■□□□□ 0.19
TVP23B-204ENST00000571018 ZC3H4Q9UPT8 1303 aaKnown RBP16.22■□□□□ 0.19
TVP23B-204ENST00000571018 CC2D2BQ6DHV5 1058 aa16.22■□□□□ 0.19
TVP23B-204ENST00000571018 RTKN2Q8IZC4 609 aa16.22■□□□□ 0.19
TVP23B-204ENST00000571018 ZBTB38Q8NAP3 1195 aaPredicted RBP16.22■□□□□ 0.19
TVP23B-204ENST00000571018 CWC25Q9NXE8 425 aaPredicted RBP16.22■□□□□ 0.19
TVP23B-204ENST00000571018 SPDYE4A6NLX3 237 aa16.21■□□□□ 0.19
TVP23B-204ENST00000571018 NEXNQ0ZGT2 675 aa16.21■□□□□ 0.19
TVP23B-204ENST00000571018 OLFM4Q6UX06 510 aa16.21■□□□□ 0.19
TVP23B-204ENST00000571018 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
TVP23B-204ENST00000571018 PCCAP05165 728 aaPredicted RBP16.2■□□□□ 0.18
TVP23B-204ENST00000571018 IGKV5-2P06315 115 aa16.2■□□□□ 0.18
TVP23B-204ENST00000571018 FKBP4Q02790 459 aaKnown RBP eCLIP16.2■□□□□ 0.18
TVP23B-204ENST00000571018 FKBP5Q13451 457 aaPredicted RBP16.2■□□□□ 0.18
TVP23B-204ENST00000571018 SF3B3Q15393 1217 aaKnown RBP16.2■□□□□ 0.18
TVP23B-204ENST00000571018 RTL5Q5HYW3 569 aaPredicted RBP16.2■□□□□ 0.18
TVP23B-204ENST00000571018 ABCC4O15439 1325 aa16.19■□□□□ 0.18
TVP23B-204ENST00000571018 SNED1Q8TER0 1413 aa16.19■□□□□ 0.18
TVP23B-204ENST00000571018 PPEF1O14829 653 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms