RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 INTS5Q6P9B9 1019 aaKnown RBP8.75□□□□□ -1.01
SMG6-204ENST00000570606 C16orf71Q8IYS4 520 aaPredicted RBP8.75□□□□□ -1.01
SMG6-204ENST00000570606 TTC5Q8N0Z6 440 aa8.75□□□□□ -1.01
SMG6-204ENST00000570606 LGR6Q9HBX8 967 aa8.75□□□□□ -1.01
SMG6-204ENST00000570606 ZBTB1Q9Y2K1 713 aa8.75□□□□□ -1.01
SMG6-204ENST00000570606 COL3A1P02461 1466 aaPredicted RBP8.75□□□□□ -1.01
SMG6-204ENST00000570606 CACNA1SQ13698 1873 aa8.74□□□□□ -1.01
SMG6-204ENST00000570606 U2SURPO15042 1029 aaKnown RBP8.74□□□□□ -1.01
SMG6-204ENST00000570606 CYP19A1P11511 503 aaPredicted RBP8.74□□□□□ -1.01
SMG6-204ENST00000570606 CHRNA5P30532 468 aa8.74□□□□□ -1.01
SMG6-204ENST00000570606 PTGDRQ13258 359 aa8.74□□□□□ -1.01
SMG6-204ENST00000570606 MTHFSDQ2M296 383 aaKnown RBP8.74□□□□□ -1.01
SMG6-204ENST00000570606 NMRK2Q9NPI5 230 aa8.74□□□□□ -1.01
SMG6-204ENST00000570606 RNF181Q9P0P0 153 aa8.74□□□□□ -1.01
SMG6-204ENST00000570606 IRF6O14896 467 aa8.73□□□□□ -1.01
SMG6-204ENST00000570606 KCNA3P22001 575 aa8.73□□□□□ -1.01
SMG6-204ENST00000570606 FECHP22830 423 aa8.73□□□□□ -1.01
SMG6-204ENST00000570606 APLP1P51693 650 aa8.73□□□□□ -1.01
SMG6-204ENST00000570606 TEFQ10587 303 aa8.73□□□□□ -1.01
SMG6-204ENST00000570606 CCDC102AQ96A19 550 aa8.73□□□□□ -1.01
SMG6-204ENST00000570606 KDM4CQ9H3R0 1056 aa8.73□□□□□ -1.01
SMG6-204ENST00000570606 NARFQ9UHQ1 456 aa8.73□□□□□ -1.01
SMG6-204ENST00000570606 PCDHGA4Q9Y5G9 962 aa8.73□□□□□ -1.01
SMG6-204ENST00000570606 COL11A2P13942 1736 aaPredicted RBP8.73□□□□□ -1.01
SMG6-204ENST00000570606 BCORQ6W2J9 1755 aa8.73□□□□□ -1.01
SMG6-204ENST00000570606 ANKRD31Q8N7Z5 1873 aa8.72□□□□□ -1.01
SMG6-204ENST00000570606 TOMM70O94826 608 aa8.72□□□□□ -1.01
SMG6-204ENST00000570606 STARD3NLO95772 234 aa8.72□□□□□ -1.01
SMG6-204ENST00000570606 CANXP27824 592 aaKnown RBP8.72□□□□□ -1.01
SMG6-204ENST00000570606 NFIXQ14938 502 aa8.72□□□□□ -1.01
SMG6-204ENST00000570606 GAS2L2Q8NHY3 880 aa8.72□□□□□ -1.01
SMG6-204ENST00000570606 ZNF330Q9Y3S2 320 aaPredicted RBP8.72□□□□□ -1.01
SMG6-204ENST00000570606 KDM2BQ8NHM5 1336 aa8.72□□□□□ -1.01
SMG6-204ENST00000570606 NPC1L1Q9UHC9 1359 aa8.72□□□□□ -1.01
SMG6-204ENST00000570606 A0A087WZG4 1122 aa8.71□□□□□ -1.02
SMG6-204ENST00000570606 POTEJP0CG39 1038 aa8.71□□□□□ -1.02
SMG6-204ENST00000570606 TM4SF1P30408 202 aa8.71□□□□□ -1.02
SMG6-204ENST00000570606 RASSF7Q02833 373 aa8.71□□□□□ -1.02
SMG6-204ENST00000570606 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.02
SMG6-204ENST00000570606 NPM2Q86SE8 214 aaKnown RBP8.71□□□□□ -1.02
SMG6-204ENST00000570606 CARMIL3Q8ND23 1372 aa8.71□□□□□ -1.02
SMG6-204ENST00000570606 GNAT3A8MTJ3 354 aa8.7□□□□□ -1.02
SMG6-204ENST00000570606 PER1O15534 1290 aaPredicted RBP8.7□□□□□ -1.02
SMG6-204ENST00000570606 SERPINB2P05120 415 aa8.7□□□□□ -1.02
SMG6-204ENST00000570606 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
SMG6-204ENST00000570606 C2CD5Q86YS7 1000 aa8.7□□□□□ -1.02
SMG6-204ENST00000570606 RBM46Q8TBY0 533 aaKnown RBP8.7□□□□□ -1.02
SMG6-204ENST00000570606 CFAP53Q96M91 514 aa8.7□□□□□ -1.02
SMG6-204ENST00000570606 EPAS1Q99814 870 aa8.7□□□□□ -1.02
SMG6-204ENST00000570606 CDHR5Q9HBB8 845 aa8.7□□□□□ -1.02
SMG6-204ENST00000570606 PCDHGA10Q9Y5H3 936 aa8.7□□□□□ -1.02
SMG6-204ENST00000570606 HEG1Q9ULI3 1381 aa8.7□□□□□ -1.02
SMG6-204ENST00000570606 DICER1Q9UPY3 1922 aaKnown RBP8.7□□□□□ -1.02
SMG6-204ENST00000570606 ARFGEF2Q9Y6D5 1785 aa8.69□□□□□ -1.02
SMG6-204ENST00000570606 FER1L6Q2WGJ9 1857 aa8.69□□□□□ -1.02
SMG6-204ENST00000570606 NPHP1O15259 732 aa8.69□□□□□ -1.02
SMG6-204ENST00000570606 AMHR2Q16671 573 aa8.69□□□□□ -1.02
SMG6-204ENST00000570606 ZNF790Q6PG37 636 aa8.69□□□□□ -1.02
SMG6-204ENST00000570606 TTLL6Q8N841 843 aa8.69□□□□□ -1.02
SMG6-204ENST00000570606 ZNF496Q96IT1 587 aaPredicted RBP8.69□□□□□ -1.02
SMG6-204ENST00000570606 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
SMG6-204ENST00000570606 BCL2L12Q9HB09 334 aa8.69□□□□□ -1.02
SMG6-204ENST00000570606 NPDC1Q9NQX5 325 aaPredicted RBP8.69□□□□□ -1.02
SMG6-204ENST00000570606 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
SMG6-204ENST00000570606 H0YIN7 160 aa8.68□□□□□ -1.02
SMG6-204ENST00000570606 LMNB1P20700 586 aa8.68□□□□□ -1.02
SMG6-204ENST00000570606 PRKAR2BP31323 418 aa8.68□□□□□ -1.02
SMG6-204ENST00000570606 EIF5P55010 431 aaKnown RBP8.68□□□□□ -1.02
SMG6-204ENST00000570606 ZNF622Q969S3 477 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMG6-204ENST00000570606 TEX13AQ9BXU3 409 aaPredicted RBP8.68□□□□□ -1.02
SMG6-204ENST00000570606 RRAGCQ9HB90 399 aa8.68□□□□□ -1.02
SMG6-204ENST00000570606 LAMB4A4D0S4 1761 aa8.68□□□□□ -1.02
SMG6-204ENST00000570606 BTBD11A6QL63 1104 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 POTEB2H3BUK9 544 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 FSTL1Q12841 308 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 TBC1D9BQ66K14 1250 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 ERICH6Q7L0X2 663 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 CNBD1Q8NA66 436 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 SLAIN1Q8ND83 568 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 IL17REQ8NFR9 667 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 CEMIPQ8WUJ3 1361 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 TBC1D2BQ9UPU7 963 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 NUDCQ9Y266 331 aa8.67□□□□□ -1.02
SMG6-204ENST00000570606 DLG5Q8TDM6 1919 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 MAP3K7O43318 606 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 PDE6BP35913 854 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 IL6STP40189 918 aaPredicted RBP8.66□□□□□ -1.02
SMG6-204ENST00000570606 ST5P78524 1137 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 PRR5LQ6MZQ0 368 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 TYW1BQ6NUM6 668 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 PARP9Q8IXQ6 854 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 CCDC24Q8N4L8 307 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 SMC1BQ8NDV3 1235 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 IL27Q8NEV9 243 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 RTF1Q92541 710 aaKnown RBP8.66□□□□□ -1.02
SMG6-204ENST00000570606 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
SMG6-204ENST00000570606 PDZRN3Q9UPQ7 1066 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 SLX4Q8IY92 1834 aa8.66□□□□□ -1.02
SMG6-204ENST00000570606 NFKBIEO00221 500 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms