RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 FLAD1Q8NFF5 587 aa19.34■□□□□ 0.69
HERPUD1-219ENST00000570273 BCL2L12Q9HB09 334 aa19.34■□□□□ 0.69
HERPUD1-219ENST00000570273 PCDHB15Q9Y5E8 787 aa19.34■□□□□ 0.69
HERPUD1-219ENST00000570273 UTYO14607 1347 aa19.34■□□□□ 0.69
HERPUD1-219ENST00000570273 B4GALNT3Q6L9W6 998 aa19.34■□□□□ 0.69
HERPUD1-219ENST00000570273 NIP7Q9Y221 180 aaKnown RBP eCLIP19.34■□□□□ 0.69
HERPUD1-219ENST00000570273 LRRFIP2Q9Y608 721 aaKnown RBP19.34■□□□□ 0.69
HERPUD1-219ENST00000570273 TUBGCP6Q96RT7 1819 aa19.33■□□□□ 0.69
HERPUD1-219ENST00000570273 UBN2Q6ZU65 1347 aa19.33■□□□□ 0.68
HERPUD1-219ENST00000570273 MSH5O43196 834 aa19.33■□□□□ 0.68
HERPUD1-219ENST00000570273 SLC15A2Q16348 729 aa19.33■□□□□ 0.68
HERPUD1-219ENST00000570273 PARP10Q53GL7 1025 aa19.33■□□□□ 0.68
HERPUD1-219ENST00000570273 UBE3BQ7Z3V4 1068 aa19.33■□□□□ 0.68
HERPUD1-219ENST00000570273 HDAC5Q9UQL6 1122 aa19.33■□□□□ 0.68
HERPUD1-219ENST00000570273 PNPLA7Q6ZV29 1317 aa19.32■□□□□ 0.68
HERPUD1-219ENST00000570273 JARID2Q92833 1246 aaPredicted RBP19.32■□□□□ 0.68
HERPUD1-219ENST00000570273 QSER1Q2KHR3 1735 aa19.31■□□□□ 0.68
HERPUD1-219ENST00000570273 TBC1D9BQ66K14 1250 aa19.31■□□□□ 0.68
HERPUD1-219ENST00000570273 BICDL1Q6ZP65 573 aa19.31■□□□□ 0.68
HERPUD1-219ENST00000570273 COL23A1Q86Y22 540 aaPredicted RBP19.31■□□□□ 0.68
HERPUD1-219ENST00000570273 SUCLG2Q96I99 432 aa19.31■□□□□ 0.68
HERPUD1-219ENST00000570273 H7C1W4 665 aa19.3■□□□□ 0.68
HERPUD1-219ENST00000570273 PCCAP05165 728 aaPredicted RBP19.3■□□□□ 0.68
HERPUD1-219ENST00000570273 FAM177BA6PVY3 158 aa19.29■□□□□ 0.68
HERPUD1-219ENST00000570273 GYS1P13807 737 aa19.29■□□□□ 0.68
HERPUD1-219ENST00000570273 CASP7P55210 303 aa19.29■□□□□ 0.68
HERPUD1-219ENST00000570273 RTL5Q5HYW3 569 aaPredicted RBP19.29■□□□□ 0.68
HERPUD1-219ENST00000570273 CEP85Q6P2H3 762 aa19.29■□□□□ 0.68
HERPUD1-219ENST00000570273 ZBTB38Q8NAP3 1195 aaPredicted RBP19.29■□□□□ 0.68
HERPUD1-219ENST00000570273 UTP14AQ9BVJ6 771 aaKnown RBP19.29■□□□□ 0.68
HERPUD1-219ENST00000570273 TRMT112Q9UI30 125 aaKnown RBP19.29■□□□□ 0.68
HERPUD1-219ENST00000570273 SUSD4Q5VX71 490 aa19.28■□□□□ 0.68
HERPUD1-219ENST00000570273 PPP1R42Q7Z4L9 355 aa19.28■□□□□ 0.68
HERPUD1-219ENST00000570273 ANKRD44Q8N8A2 993 aa19.28■□□□□ 0.68
HERPUD1-219ENST00000570273 SETDB2Q96T68 719 aa19.28■□□□□ 0.68
HERPUD1-219ENST00000570273 CASZ1Q86V15 1759 aa19.28■□□□□ 0.68
HERPUD1-219ENST00000570273 RPAP2Q8IXW5 612 aaPredicted RBP19.27■□□□□ 0.68
HERPUD1-219ENST00000570273 FAM89AQ96GI7 184 aa19.27■□□□□ 0.68
HERPUD1-219ENST00000570273 RWDD1Q9H446 243 aaPredicted RBP19.27■□□□□ 0.68
HERPUD1-219ENST00000570273 COL24A1Q17RW2 1714 aa19.26■□□□□ 0.67
HERPUD1-219ENST00000570273 NTSR2O95665 410 aa19.26■□□□□ 0.67
HERPUD1-219ENST00000570273 BICC1Q9H694 974 aaKnown RBP19.26■□□□□ 0.67
HERPUD1-219ENST00000570273 CDHR2Q9BYE9 1310 aa19.26■□□□□ 0.67
HERPUD1-219ENST00000570273 CARMIL3Q8ND23 1372 aa19.26■□□□□ 0.67
HERPUD1-219ENST00000570273 HMMRO75330 724 aa19.25■□□□□ 0.67
HERPUD1-219ENST00000570273 HDAC1Q13547 482 aaPredicted RBP19.25■□□□□ 0.67
HERPUD1-219ENST00000570273 NFIXQ14938 502 aa19.25■□□□□ 0.67
HERPUD1-219ENST00000570273 SRCAPQ6ZRS2 3230 aa19.25■□□□□ 0.67
HERPUD1-219ENST00000570273 SH3TC1Q8TE82 1336 aa19.25■□□□□ 0.67
HERPUD1-219ENST00000570273 IGHDP01880 384 aa19.25■□□□□ 0.67
HERPUD1-219ENST00000570273 SIRT2Q8IXJ6 389 aa19.25■□□□□ 0.67
HERPUD1-219ENST00000570273 KAZALD1Q96I82 304 aa19.25■□□□□ 0.67
HERPUD1-219ENST00000570273 NYXQ9GZU5 481 aa19.25■□□□□ 0.67
HERPUD1-219ENST00000570273 IRS4O14654 1257 aaPredicted RBP19.24■□□□□ 0.67
HERPUD1-219ENST00000570273 ATP8B2P98198 1209 aa19.24■□□□□ 0.67
HERPUD1-219ENST00000570273 R3HDM1Q15032 1099 aaKnown RBP19.24■□□□□ 0.67
HERPUD1-219ENST00000570273 EPHA10Q5JZY3 1008 aa19.24■□□□□ 0.67
HERPUD1-219ENST00000570273 NBPF5PQ86XG9 351 aaPredicted RBP19.24■□□□□ 0.67
HERPUD1-219ENST00000570273 SYNE4Q8N205 404 aa19.24■□□□□ 0.67
HERPUD1-219ENST00000570273 CENPQQ7L2Z9 268 aaPredicted RBP19.23■□□□□ 0.67
HERPUD1-219ENST00000570273 NUTM1Q86Y26 1132 aa19.23■□□□□ 0.67
HERPUD1-219ENST00000570273 NLGN1Q8N2Q7 840 aa19.23■□□□□ 0.67
HERPUD1-219ENST00000570273 KDM2BQ8NHM5 1336 aa19.23■□□□□ 0.67
HERPUD1-219ENST00000570273 PNMA6EA0A0J9YXQ4 647 aa19.22■□□□□ 0.67
HERPUD1-219ENST00000570273 PSDA5PKW4 1024 aaPredicted RBP19.22■□□□□ 0.67
HERPUD1-219ENST00000570273 NPHP1O15259 732 aa19.22■□□□□ 0.67
HERPUD1-219ENST00000570273 SRGAP3O43295 1099 aa19.22■□□□□ 0.67
HERPUD1-219ENST00000570273 GTF2E1P29083 439 aaPredicted RBP19.22■□□□□ 0.67
HERPUD1-219ENST00000570273 MTX1Q13505 466 aa19.22■□□□□ 0.67
HERPUD1-219ENST00000570273 MSL1Q68DK7 614 aa19.22■□□□□ 0.67
HERPUD1-219ENST00000570273 PLA2G12BQ9BX93 195 aa19.22■□□□□ 0.67
HERPUD1-219ENST00000570273 HSP90B1P14625 803 aaKnown RBP19.21■□□□□ 0.67
HERPUD1-219ENST00000570273 FOXO4P98177 505 aa19.21■□□□□ 0.67
HERPUD1-219ENST00000570273 RABL6Q3YEC7 729 aaPredicted RBP19.21■□□□□ 0.67
HERPUD1-219ENST00000570273 CHMP3Q9Y3E7 222 aa19.21■□□□□ 0.67
HERPUD1-219ENST00000570273 HCLS1P14317 486 aaPredicted RBP19.2■□□□□ 0.66
HERPUD1-219ENST00000570273 DDR1Q08345 913 aa19.2■□□□□ 0.66
HERPUD1-219ENST00000570273 ERFEQ4G0M1 354 aa19.2■□□□□ 0.66
HERPUD1-219ENST00000570273 LMBR1LQ6UX01 489 aa19.2■□□□□ 0.66
HERPUD1-219ENST00000570273 ABCC12Q96J65 1359 aa19.2■□□□□ 0.66
HERPUD1-219ENST00000570273 PDE8AO60658 829 aa19.19■□□□□ 0.66
HERPUD1-219ENST00000570273 TM4SF1P30408 202 aa19.19■□□□□ 0.66
HERPUD1-219ENST00000570273 CTSWP56202 376 aa19.19■□□□□ 0.66
HERPUD1-219ENST00000570273 POLA2Q14181 598 aa19.19■□□□□ 0.66
HERPUD1-219ENST00000570273 TPTE2Q6XPS3 522 aa19.19■□□□□ 0.66
HERPUD1-219ENST00000570273 CNBD1Q8NA66 436 aa19.19■□□□□ 0.66
HERPUD1-219ENST00000570273 SSH3Q8TE77 659 aa19.19■□□□□ 0.66
HERPUD1-219ENST00000570273 LAMB2P55268 1798 aa19.19■□□□□ 0.66
HERPUD1-219ENST00000570273 LRP5O75197 1615 aa19.19■□□□□ 0.66
HERPUD1-219ENST00000570273 POLRMTO00411 1230 aaKnown RBP19.18■□□□□ 0.66
HERPUD1-219ENST00000570273 SERPINB2P05120 415 aa19.18■□□□□ 0.66
HERPUD1-219ENST00000570273 MMP10P09238 476 aa19.17■□□□□ 0.66
HERPUD1-219ENST00000570273 DDX60Q8IY21 1712 aaKnown RBP19.17■□□□□ 0.66
HERPUD1-219ENST00000570273 GCC1Q96CN9 775 aa19.17■□□□□ 0.66
HERPUD1-219ENST00000570273 CCDC85AQ96PX6 553 aaPredicted RBP19.17■□□□□ 0.66
HERPUD1-219ENST00000570273 ST5P78524 1137 aa19.16■□□□□ 0.66
HERPUD1-219ENST00000570273 FAM161AQ3B820 660 aa19.16■□□□□ 0.66
HERPUD1-219ENST00000570273 PRR5LQ6MZQ0 368 aa19.16■□□□□ 0.66
HERPUD1-219ENST00000570273 SMC5Q8IY18 1101 aa19.16■□□□□ 0.66
HERPUD1-219ENST00000570273 CCDC24Q8N4L8 307 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms