RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 CC2D2BQ6DHV5 1058 aa13.9□□□□□ -0.18
TCF4-244ENST00000570146 HHIPL1Q96JK4 782 aa13.9□□□□□ -0.18
TCF4-244ENST00000570146 PANK3Q9H999 370 aa13.9□□□□□ -0.18
TCF4-244ENST00000570146 SCN11AQ9UI33 1791 aa13.9□□□□□ -0.18
TCF4-244ENST00000570146 COL11A2P13942 1736 aaPredicted RBP13.9□□□□□ -0.18
TCF4-244ENST00000570146 KLRG2A4D1S0 409 aaPredicted RBP13.89□□□□□ -0.19
TCF4-244ENST00000570146 HMOX1P09601 288 aa13.89□□□□□ -0.19
TCF4-244ENST00000570146 MTHFSDQ2M296 383 aaKnown RBP13.89□□□□□ -0.19
TCF4-244ENST00000570146 CST9Q5W186 159 aa13.89□□□□□ -0.19
TCF4-244ENST00000570146 ANKRD31Q8N7Z5 1873 aa13.89□□□□□ -0.19
TCF4-244ENST00000570146 ADAMTSL1Q8N6G6 1762 aa13.88□□□□□ -0.19
TCF4-244ENST00000570146 SLX4Q8IY92 1834 aa13.88□□□□□ -0.19
TCF4-244ENST00000570146 GABBR2O75899 941 aa13.88□□□□□ -0.19
TCF4-244ENST00000570146 CELF2O95319 508 aaKnown RBP13.88□□□□□ -0.19
TCF4-244ENST00000570146 A1BGP04217 495 aa13.88□□□□□ -0.19
TCF4-244ENST00000570146 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
TCF4-244ENST00000570146 SAPCD2Q86UD0 394 aa13.88□□□□□ -0.19
TCF4-244ENST00000570146 TMX4Q9H1E5 349 aaPredicted RBP13.88□□□□□ -0.19
TCF4-244ENST00000570146 THSD7BQ9C0I4 1608 aa13.87□□□□□ -0.19
TCF4-244ENST00000570146 TRAF5O00463 557 aa13.87□□□□□ -0.19
TCF4-244ENST00000570146 EPS15P42566 896 aa13.87□□□□□ -0.19
TCF4-244ENST00000570146 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
TCF4-244ENST00000570146 OLFM4Q6UX06 510 aa13.87□□□□□ -0.19
TCF4-244ENST00000570146 LARGE2Q8N3Y3 721 aa13.87□□□□□ -0.19
TCF4-244ENST00000570146 ADARB2Q9NS39 739 aaKnown RBP13.87□□□□□ -0.19
TCF4-244ENST00000570146 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
TCF4-244ENST00000570146 KNSTRNQ9Y448 316 aa13.87□□□□□ -0.19
TCF4-244ENST00000570146 SCN7AQ01118 1682 aa13.87□□□□□ -0.19
TCF4-244ENST00000570146 RGL2O15211 777 aa13.86□□□□□ -0.19
TCF4-244ENST00000570146 SCNN1DP51172 638 aa13.86□□□□□ -0.19
TCF4-244ENST00000570146 NOGQ13253 232 aa13.86□□□□□ -0.19
TCF4-244ENST00000570146 NIM1KQ8IY84 436 aa13.86□□□□□ -0.19
TCF4-244ENST00000570146 GNAT3A8MTJ3 354 aa13.85□□□□□ -0.19
TCF4-244ENST00000570146 FMR1Q06787 632 aaKnown RBP eCLIP13.85□□□□□ -0.19
TCF4-244ENST00000570146 GAS2L2Q8NHY3 880 aa13.85□□□□□ -0.19
TCF4-244ENST00000570146 CIAPIN1Q6FI81 312 aa13.84□□□□□ -0.19
TCF4-244ENST00000570146 RPGRQ92834 1020 aaKnown RBP13.84□□□□□ -0.19
TCF4-244ENST00000570146 NYXQ9GZU5 481 aa13.84□□□□□ -0.19
TCF4-244ENST00000570146 ZNF408Q9H9D4 720 aa13.84□□□□□ -0.19
TCF4-244ENST00000570146 ARFGEF2Q9Y6D5 1785 aa13.83□□□□□ -0.19
TCF4-244ENST00000570146 FAM177BA6PVY3 158 aa13.83□□□□□ -0.2
TCF4-244ENST00000570146 BTBD11A6QL63 1104 aa13.83□□□□□ -0.2
TCF4-244ENST00000570146 DIAPH1O60610 1272 aaKnown RBP13.83□□□□□ -0.2
TCF4-244ENST00000570146 SOX10P56693 466 aa13.83□□□□□ -0.2
TCF4-244ENST00000570146 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
TCF4-244ENST00000570146 SAGE1Q9NXZ1 904 aa13.82□□□□□ -0.2
TCF4-244ENST00000570146 GPRC5DQ9NZD1 345 aa13.82□□□□□ -0.2
TCF4-244ENST00000570146 CDC37L1Q7L3B6 337 aa13.81□□□□□ -0.2
TCF4-244ENST00000570146 GCC1Q96CN9 775 aa13.81□□□□□ -0.2
TCF4-244ENST00000570146 VPS33BQ9H267 617 aa13.81□□□□□ -0.2
TCF4-244ENST00000570146 UBR2Q8IWV8 1755 aa13.81□□□□□ -0.2
TCF4-244ENST00000570146 PPIP5K2O43314 1243 aa13.8□□□□□ -0.2
TCF4-244ENST00000570146 SNRPA1P09661 255 aaKnown RBP13.8□□□□□ -0.2
TCF4-244ENST00000570146 CRY2Q49AN0 593 aa13.8□□□□□ -0.2
TCF4-244ENST00000570146 NBPF15Q8N660 670 aa13.8□□□□□ -0.2
TCF4-244ENST00000570146 IL17REQ8NFR9 667 aa13.8□□□□□ -0.2
TCF4-244ENST00000570146 GLIS2Q9BZE0 524 aaPredicted RBP13.8□□□□□ -0.2
TCF4-244ENST00000570146 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
TCF4-244ENST00000570146 LTBP1Q14766 1721 aa13.8□□□□□ -0.2
TCF4-244ENST00000570146 HUNKP57058 714 aa13.79□□□□□ -0.2
TCF4-244ENST00000570146 SUPT20HQ8NEM7 779 aa13.79□□□□□ -0.2
TCF4-244ENST00000570146 RBM17Q96I25 401 aaKnown RBP13.79□□□□□ -0.2
TCF4-244ENST00000570146 BCL2L13Q9BXK5 485 aa13.79□□□□□ -0.2
TCF4-244ENST00000570146 USP16Q9Y5T5 823 aa13.79□□□□□ -0.2
TCF4-244ENST00000570146 CDHR2Q9BYE9 1310 aa13.79□□□□□ -0.2
TCF4-244ENST00000570146 PDE4DIPQ5VU43 2346 aa13.79□□□□□ -0.2
TCF4-244ENST00000570146 PPEF1O14829 653 aaPredicted RBP13.78□□□□□ -0.2
TCF4-244ENST00000570146 HOXA10P31260 410 aaPredicted RBP13.78□□□□□ -0.2
TCF4-244ENST00000570146 PIP4K2AP48426 406 aaPredicted RBP13.78□□□□□ -0.2
TCF4-244ENST00000570146 TNIP1Q15025 636 aa13.78□□□□□ -0.2
TCF4-244ENST00000570146 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
TCF4-244ENST00000570146 PGAP2Q9UHJ9 254 aa13.78□□□□□ -0.2
TCF4-244ENST00000570146 ZNRF3Q9ULT6 936 aa13.78□□□□□ -0.2
TCF4-244ENST00000570146 CACNA1SQ13698 1873 aa13.78□□□□□ -0.2
TCF4-244ENST00000570146 U2SURPO15042 1029 aaKnown RBP13.77□□□□□ -0.21
TCF4-244ENST00000570146 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.21
TCF4-244ENST00000570146 KIF7Q2M1P5 1343 aa13.77□□□□□ -0.21
TCF4-244ENST00000570146 NPC1L1Q9UHC9 1359 aa13.76□□□□□ -0.21
TCF4-244ENST00000570146 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
TCF4-244ENST00000570146 CTU1Q7Z7A3 348 aaKnown RBP13.76□□□□□ -0.21
TCF4-244ENST00000570146 C2orf69Q8N8R5 385 aa13.76□□□□□ -0.21
TCF4-244ENST00000570146 CRAMP1Q96RY5 1269 aa13.76□□□□□ -0.21
TCF4-244ENST00000570146 SNED1Q8TER0 1413 aa13.75□□□□□ -0.21
TCF4-244ENST00000570146 H7C1D1 291 aa13.75□□□□□ -0.21
TCF4-244ENST00000570146 TCERG1O14776 1098 aaKnown RBP13.75□□□□□ -0.21
TCF4-244ENST00000570146 CXCL9Q07325 125 aa13.75□□□□□ -0.21
TCF4-244ENST00000570146 PKN2Q16513 984 aaKnown RBP13.75□□□□□ -0.21
TCF4-244ENST00000570146 AOC3Q16853 763 aa13.75□□□□□ -0.21
TCF4-244ENST00000570146 RGMBQ6NW40 437 aa13.75□□□□□ -0.21
TCF4-244ENST00000570146 NUTM1Q86Y26 1132 aa13.75□□□□□ -0.21
TCF4-244ENST00000570146 RTF1Q92541 710 aaKnown RBP13.75□□□□□ -0.21
TCF4-244ENST00000570146 CEMIPQ8WUJ3 1361 aa13.74□□□□□ -0.21
TCF4-244ENST00000570146 BCORQ6W2J9 1755 aa13.74□□□□□ -0.21
TCF4-244ENST00000570146 KCNQ3O43525 872 aa13.74□□□□□ -0.21
TCF4-244ENST00000570146 TRPA1O75762 1119 aa13.74□□□□□ -0.21
TCF4-244ENST00000570146 KIF6Q6ZMV9 814 aa13.74□□□□□ -0.21
TCF4-244ENST00000570146 TRPM7Q96QT4 1865 aa13.74□□□□□ -0.21
TCF4-244ENST00000570146 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
TCF4-244ENST00000570146 ZNF157P51786 506 aaPredicted RBP13.73□□□□□ -0.21
TCF4-244ENST00000570146 HLFQ16534 295 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms