RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 RABEP1Q15276 862 aa16.97■□□□□ 0.31
GCOM1-213ENST00000569945 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
GCOM1-213ENST00000569945 TSPY26PQ9H489 355 aa16.97■□□□□ 0.31
GCOM1-213ENST00000569945 BCL9O00512 1426 aa16.97■□□□□ 0.31
GCOM1-213ENST00000569945 MBD3O95983 291 aa16.97■□□□□ 0.31
GCOM1-213ENST00000569945 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
GCOM1-213ENST00000569945 TTC12Q9H892 705 aaPredicted RBP16.96■□□□□ 0.31
GCOM1-213ENST00000569945 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
GCOM1-213ENST00000569945 SBF2Q86WG5 1849 aa16.96■□□□□ 0.31
GCOM1-213ENST00000569945 ZNF790Q6PG37 636 aa16.96■□□□□ 0.3
GCOM1-213ENST00000569945 KDM3BQ7LBC6 1761 aa16.95■□□□□ 0.3
GCOM1-213ENST00000569945 TRIM37O94972 964 aa16.95■□□□□ 0.3
GCOM1-213ENST00000569945 DNAJC2Q99543 621 aaKnown RBP16.95■□□□□ 0.3
GCOM1-213ENST00000569945 DIAPH3Q9NSV4 1193 aa16.95■□□□□ 0.3
GCOM1-213ENST00000569945 CTNNA3Q9UI47 895 aa16.95■□□□□ 0.3
GCOM1-213ENST00000569945 EIF4A1P60842 406 aaKnown RBP16.95■□□□□ 0.3
GCOM1-213ENST00000569945 FAM196AQ6ZSG2 479 aa16.95■□□□□ 0.3
GCOM1-213ENST00000569945 CHAMP1Q96JM3 812 aa16.95■□□□□ 0.3
GCOM1-213ENST00000569945 TULP2O00295 520 aa16.94■□□□□ 0.3
GCOM1-213ENST00000569945 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
GCOM1-213ENST00000569945 UVSSAQ2YD98 709 aa16.94■□□□□ 0.3
GCOM1-213ENST00000569945 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
GCOM1-213ENST00000569945 ZNF496Q96IT1 587 aaPredicted RBP16.94■□□□□ 0.3
GCOM1-213ENST00000569945 CT47B1P0C2W7 299 aaPredicted RBP16.93■□□□□ 0.3
GCOM1-213ENST00000569945 MPNDQ8N594 471 aa16.93■□□□□ 0.3
GCOM1-213ENST00000569945 ZGPATQ8N5A5 531 aaKnown RBP16.93■□□□□ 0.3
GCOM1-213ENST00000569945 DDX41Q9UJV9 622 aaKnown RBP16.92■□□□□ 0.3
GCOM1-213ENST00000569945 CCDC66A2RUB6 948 aa16.92■□□□□ 0.3
GCOM1-213ENST00000569945 KCNQ4P56696 695 aa16.92■□□□□ 0.3
GCOM1-213ENST00000569945 NCBP1Q09161 790 aaKnown RBP16.92■□□□□ 0.3
GCOM1-213ENST00000569945 ATF7IPQ6VMQ6 1270 aa16.92■□□□□ 0.3
GCOM1-213ENST00000569945 KIAA1524Q8TCG1 905 aa16.92■□□□□ 0.3
GCOM1-213ENST00000569945 SLC4A9Q96Q91 983 aa16.92■□□□□ 0.3
GCOM1-213ENST00000569945 NHSQ6T4R5 1651 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 SYCP1Q15431 976 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 TERF2Q15554 542 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 BABAM1Q9NWV8 329 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 MORC2Q9Y6X9 1032 aaPredicted RBP16.91■□□□□ 0.3
GCOM1-213ENST00000569945 PAPPAQ13219 1627 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 BTAF1O14981 1849 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 CAPN2P17655 700 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 TTC5Q8N0Z6 440 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 TIGD1Q96MW7 591 aa16.91■□□□□ 0.3
GCOM1-213ENST00000569945 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
GCOM1-213ENST00000569945 TMEM57Q8N5G2 664 aa16.9■□□□□ 0.3
GCOM1-213ENST00000569945 VAMP4O75379 141 aa16.9■□□□□ 0.3
GCOM1-213ENST00000569945 SMC4Q9NTJ3 1288 aa16.9■□□□□ 0.3
GCOM1-213ENST00000569945 USP25Q9UHP3 1055 aa16.9■□□□□ 0.3
GCOM1-213ENST00000569945 CDC45O75419 566 aa16.89■□□□□ 0.29
GCOM1-213ENST00000569945 TWISTNBQ3B726 338 aaPredicted RBP16.89■□□□□ 0.29
GCOM1-213ENST00000569945 ADCY5O95622 1261 aa16.88■□□□□ 0.29
GCOM1-213ENST00000569945 SSH1Q8WYL5 1049 aa16.88■□□□□ 0.29
GCOM1-213ENST00000569945 HEG1Q9ULI3 1381 aa16.88■□□□□ 0.29
GCOM1-213ENST00000569945 GIGYF1O75420 1035 aaPredicted RBP16.88■□□□□ 0.29
GCOM1-213ENST00000569945 CHRM1P11229 460 aaPredicted RBP16.88■□□□□ 0.29
GCOM1-213ENST00000569945 USP16Q9Y5T5 823 aa16.88■□□□□ 0.29
GCOM1-213ENST00000569945 UBR2Q8IWV8 1755 aa16.88■□□□□ 0.29
GCOM1-213ENST00000569945 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
GCOM1-213ENST00000569945 FMNL2Q96PY5 1086 aa16.87■□□□□ 0.29
GCOM1-213ENST00000569945 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
GCOM1-213ENST00000569945 EIF2S2P20042 333 aaKnown RBP16.87■□□□□ 0.29
GCOM1-213ENST00000569945 C5P01031 1676 aa16.87■□□□□ 0.29
GCOM1-213ENST00000569945 KCNF1Q9H3M0 494 aa16.86■□□□□ 0.29
GCOM1-213ENST00000569945 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
GCOM1-213ENST00000569945 SYAP1Q96A49 352 aaPredicted RBP16.86■□□□□ 0.29
GCOM1-213ENST00000569945 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
GCOM1-213ENST00000569945 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
GCOM1-213ENST00000569945 PYCARDQ9ULZ3 195 aa16.86■□□□□ 0.29
GCOM1-213ENST00000569945 DNAJC10Q8IXB1 793 aa16.85■□□□□ 0.29
GCOM1-213ENST00000569945 LOC102724428A0A0B4J2F2 783 aa16.85■□□□□ 0.29
GCOM1-213ENST00000569945 SIK1P57059 783 aa16.85■□□□□ 0.29
GCOM1-213ENST00000569945 ITPK1Q13572 414 aa16.85■□□□□ 0.29
GCOM1-213ENST00000569945 ANKRD45Q5TZF3 282 aa16.85■□□□□ 0.29
GCOM1-213ENST00000569945 TEX2Q8IWB9 1127 aa16.85■□□□□ 0.29
GCOM1-213ENST00000569945 GCC1Q96CN9 775 aa16.85■□□□□ 0.29
GCOM1-213ENST00000569945 PHF14O94880 888 aa16.84■□□□□ 0.29
GCOM1-213ENST00000569945 ANXA1P04083 346 aa16.84■□□□□ 0.29
GCOM1-213ENST00000569945 IRX3P78415 501 aaPredicted RBP16.84■□□□□ 0.29
GCOM1-213ENST00000569945 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
GCOM1-213ENST00000569945 ILDR2Q71H61 639 aa16.84■□□□□ 0.29
GCOM1-213ENST00000569945 KIF18AQ8NI77 898 aa16.84■□□□□ 0.29
GCOM1-213ENST00000569945 APBA3O96018 575 aa16.84■□□□□ 0.29
GCOM1-213ENST00000569945 SNRPA1P09661 255 aaKnown RBP16.84■□□□□ 0.29
GCOM1-213ENST00000569945 FAM53CQ9NYF3 392 aa16.84■□□□□ 0.29
GCOM1-213ENST00000569945 BRD1O95696 1058 aa16.83■□□□□ 0.28
GCOM1-213ENST00000569945 GSPT1P15170 499 aaKnown RBP16.83■□□□□ 0.28
GCOM1-213ENST00000569945 ATP6V1AP38606 617 aa16.83■□□□□ 0.28
GCOM1-213ENST00000569945 ZFP91Q96JP5 570 aaPredicted RBP16.83■□□□□ 0.28
GCOM1-213ENST00000569945 CALCOCO1Q9P1Z2 691 aa16.83■□□□□ 0.28
GCOM1-213ENST00000569945 PROM2Q8N271 834 aa16.82■□□□□ 0.28
GCOM1-213ENST00000569945 RGS22Q8NE09 1264 aa16.82■□□□□ 0.28
GCOM1-213ENST00000569945 PROSER3Q2NL68 480 aa16.82■□□□□ 0.28
GCOM1-213ENST00000569945 HDGFL1Q5TGJ6 251 aa16.82■□□□□ 0.28
GCOM1-213ENST00000569945 SMARCC1Q92922 1105 aaPredicted RBP16.82■□□□□ 0.28
GCOM1-213ENST00000569945 LRRC4BQ9NT99 713 aa16.82■□□□□ 0.28
GCOM1-213ENST00000569945 KDM4AO75164 1064 aa16.81■□□□□ 0.28
GCOM1-213ENST00000569945 A1BGP04217 495 aa16.81■□□□□ 0.28
GCOM1-213ENST00000569945 TNS1Q9HBL0 1735 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms