RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ATP2B2Q01814 1243 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 PSMD2Q13200 908 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 PDE3BQ13370 1112 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 C16orf46Q6P387 395 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 SCG3Q8WXD2 468 aaKnown RBP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 DHX38Q92620 1227 aaKnown RBP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 VTI1AQ96AJ9 217 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 ALKBH8Q96BT7 664 aaKnown RBP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 SLC10A4Q96EP9 437 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 FAM129BQ96TA1 746 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 VTI1BQ9UEU0 232 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 CDV3Q9UKY7 258 aaKnown RBP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 TMA7Q9Y2S6 64 aaKnown RBP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 ZC3H13Q5T200 1668 aaKnown RBP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 RNF17Q9BXT8 1623 aaKnown RBP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 MED1Q15648 1581 aaPredicted RBP4.57□□□□□ -1.68
CNOT1-221ENST00000569924 UGGT1Q9NYU2 1555 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 MAST1Q9Y2H9 1570 aa4.57□□□□□ -1.68
CNOT1-221ENST00000569924 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.56□□□□□ -1.68
CNOT1-221ENST00000569924 TMEM229AB2RXF0 380 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 BACH1O14867 736 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 FZD6O60353 706 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 TSPY4P0CV99 314 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 TSPY10P0CW01 314 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 EIF1AXP47813 144 aaKnown RBP4.56□□□□□ -1.68
CNOT1-221ENST00000569924 MYT1Q01538 1121 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 RBL2Q08999 1139 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 AAMPQ13685 434 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 CCDC144BQ3MJ40 725 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 ZNF662Q6ZS27 426 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 SAP130Q9H0E3 1048 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 ACBD3Q9H3P7 528 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 PRDM9Q9NQV7 894 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 RNF19AQ9NV58 838 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 CCDC87Q9NVE4 849 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 STIM2Q9P246 746 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 WWC3Q9ULE0 1092 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 HPS5Q9UPZ3 1129 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 IQGAP1P46940 1657 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 EIF2AK4Q9P2K8 1649 aaKnown RBP4.56□□□□□ -1.68
CNOT1-221ENST00000569924 ALKQ9UM73 1620 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 ABCC3O15438 1527 aa4.56□□□□□ -1.68
CNOT1-221ENST00000569924 ERBB3P21860 1342 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 SOWAHBA6NEL2 793 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 EIF5BO60841 1220 aaKnown RBP4.55□□□□□ -1.68
CNOT1-221ENST00000569924 PIP4K2BP78356 416 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 AGERQ15109 404 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 VARS2Q5ST30 1063 aaKnown RBP4.55□□□□□ -1.68
CNOT1-221ENST00000569924 SOGA3Q5TF21 947 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 ALG1LQ6GMV1 187 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 TNS4Q8IZW8 715 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 CCDC24Q8N4L8 307 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 BAP1Q92560 729 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 FOXJ1Q92949 421 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 C1QTNF2Q9BXJ5 285 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 TSR3Q9UJK0 312 aaKnown RBP4.55□□□□□ -1.68
CNOT1-221ENST00000569924 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-221ENST00000569924 SYNMO15061 1565 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 ERVK-7P63135 1459 aa4.55□□□□□ -1.68
CNOT1-221ENST00000569924 SBNO2Q9Y2G9 1366 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 MROH1Q8NDA8 1641 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 WASLO00401 505 aaPredicted RBP4.54□□□□□ -1.68
CNOT1-221ENST00000569924 GPR182O15218 404 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 TNNI2P48788 182 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 ENOX2Q16206 610 aaKnown RBP4.54□□□□□ -1.68
CNOT1-221ENST00000569924 C4orf48Q5BLP8 95 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 COX20Q5RI15 118 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 TRMT44Q8IYL2 757 aaKnown RBP4.54□□□□□ -1.68
CNOT1-221ENST00000569924 STAG2Q8N3U4 1231 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 ANKK1Q8NFD2 765 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 CWC22Q9HCG8 908 aaKnown RBP4.54□□□□□ -1.68
CNOT1-221ENST00000569924 IQSEC3Q9UPP2 1182 aaPredicted RBP4.54□□□□□ -1.68
CNOT1-221ENST00000569924 EMILIN1Q9Y6C2 1016 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 MAP3K1Q13233 1512 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 LRRC7Q96NW7 1537 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 STRCP1A6NGW2 1772 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 LRRC9Q6ZRR7 1453 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 ARHGAP31Q2M1Z3 1444 aa4.54□□□□□ -1.68
CNOT1-221ENST00000569924 SLIT1O75093 1534 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 DUOX2Q9NRD8 1548 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 UBR1Q8IWV7 1749 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 A0A1W2PRU2 124 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 TNFRSF10BO14763 440 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 GNA15P30679 374 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 DNAJA1P31689 397 aaKnown RBP4.53□□□□□ -1.68
CNOT1-221ENST00000569924 SCNN1DP51172 638 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 EPHA4P54764 986 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 ARID5AQ03989 594 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 SDE2Q6IQ49 451 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 ZNF511Q8NB15 262 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 SETDB2Q96T68 719 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 NIF3L1Q9GZT8 377 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 TSPAN10Q9H1Z9 355 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-221ENST00000569924 SCAF11Q99590 1463 aaKnown RBP4.53□□□□□ -1.68
CNOT1-221ENST00000569924 ARHGAP23Q9P227 1491 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 MYOM3Q5VTT5 1437 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 VPS8Q8N3P4 1428 aa4.53□□□□□ -1.68
CNOT1-221ENST00000569924 CEP152O94986 1710 aa4.52□□□□□ -1.69
CNOT1-221ENST00000569924 PRDM15P57071 1507 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-221ENST00000569924 PNMA6FA0A0J9YX94 578 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms