RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 CALD1Q05682 793 aaKnown RBP29.34■■■□□ 2.29
RBFOX1-219ENST00000569895 GRIPAP1Q4V328 841 aa29.34■■■□□ 2.29
RBFOX1-219ENST00000569895 XAGE3Q8WTP9 111 aa29.34■■■□□ 2.29
RBFOX1-219ENST00000569895 NLRP3Q96P20 1036 aa29.34■■■□□ 2.29
RBFOX1-219ENST00000569895 RIC1Q4ADV7 1423 aa29.34■■■□□ 2.29
RBFOX1-219ENST00000569895 TIAM2Q8IVF5 1701 aa29.34■■■□□ 2.29
RBFOX1-219ENST00000569895 KRT24Q2M2I5 525 aa29.32■■■□□ 2.28
RBFOX1-219ENST00000569895 HDGFL1Q5TGJ6 251 aa29.32■■■□□ 2.28
RBFOX1-219ENST00000569895 CRAMP1Q96RY5 1269 aa29.32■■■□□ 2.28
RBFOX1-219ENST00000569895 ZNF277Q9NRM2 450 aaPredicted RBP29.32■■■□□ 2.28
RBFOX1-219ENST00000569895 RNF123Q5XPI4 1314 aa29.31■■■□□ 2.28
RBFOX1-219ENST00000569895 POTECB2RU33 542 aa29.31■■■□□ 2.28
RBFOX1-219ENST00000569895 APAF1O14727 1248 aa29.31■■■□□ 2.28
RBFOX1-219ENST00000569895 SYNE4Q8N205 404 aa29.31■■■□□ 2.28
RBFOX1-219ENST00000569895 CACNA1SQ13698 1873 aa29.3■■■□□ 2.28
RBFOX1-219ENST00000569895 DDNO94850 711 aaPredicted RBP29.3■■■□□ 2.28
RBFOX1-219ENST00000569895 SLC10A5Q5PT55 438 aa29.3■■■□□ 2.28
RBFOX1-219ENST00000569895 OLFM4Q6UX06 510 aa29.3■■■□□ 2.28
RBFOX1-219ENST00000569895 TMX4Q9H1E5 349 aaPredicted RBP29.3■■■□□ 2.28
RBFOX1-219ENST00000569895 DBF4Q9UBU7 674 aaPredicted RBP29.3■■■□□ 2.28
RBFOX1-219ENST00000569895 TCIRG1Q13488 830 aa29.29■■■□□ 2.28
RBFOX1-219ENST00000569895 DNAJC5GQ8N7S2 189 aa29.29■■■□□ 2.28
RBFOX1-219ENST00000569895 PSMD1Q99460 953 aa29.29■■■□□ 2.28
RBFOX1-219ENST00000569895 CHPF2Q9P2E5 772 aa29.29■■■□□ 2.28
RBFOX1-219ENST00000569895 DICER1Q9UPY3 1922 aaKnown RBP29.29■■■□□ 2.28
RBFOX1-219ENST00000569895 IQCA1LA6NCM1 817 aa29.28■■■□□ 2.28
RBFOX1-219ENST00000569895 IARSP41252 1262 aaKnown RBP29.28■■■□□ 2.28
RBFOX1-219ENST00000569895 GNAI1P63096 354 aa29.27■■■□□ 2.28
RBFOX1-219ENST00000569895 DUSP27Q5VZP5 1158 aa29.27■■■□□ 2.28
RBFOX1-219ENST00000569895 MBIPQ9NS73 344 aa29.27■■■□□ 2.28
RBFOX1-219ENST00000569895 WDR90Q96KV7 1748 aa29.27■■■□□ 2.28
RBFOX1-219ENST00000569895 NLRP10Q86W26 655 aa29.26■■■□□ 2.27
RBFOX1-219ENST00000569895 JDP2Q8WYK2 163 aa29.26■■■□□ 2.27
RBFOX1-219ENST00000569895 IFT57Q9NWB7 429 aa29.26■■■□□ 2.27
RBFOX1-219ENST00000569895 HYPKQ9NX55 129 aa29.26■■■□□ 2.27
RBFOX1-219ENST00000569895 ANKRD13DQ6ZTN6 518 aa29.25■■■□□ 2.27
RBFOX1-219ENST00000569895 PLBD2Q8NHP8 589 aa29.25■■■□□ 2.27
RBFOX1-219ENST00000569895 TRMT112Q9UI30 125 aaKnown RBP29.25■■■□□ 2.27
RBFOX1-219ENST00000569895 PPEF1O14829 653 aaPredicted RBP29.24■■■□□ 2.27
RBFOX1-219ENST00000569895 ZNF853P0CG23 659 aa29.24■■■□□ 2.27
RBFOX1-219ENST00000569895 L3MBTL3Q96JM7 780 aaPredicted RBP29.24■■■□□ 2.27
RBFOX1-219ENST00000569895 CHMP4AQ9BY43 222 aa29.23■■■□□ 2.27
RBFOX1-219ENST00000569895 C3orf67Q6ZVT6 689 aa29.22■■■□□ 2.27
RBFOX1-219ENST00000569895 SH3TC1Q8TE82 1336 aa29.21■■■□□ 2.27
RBFOX1-219ENST00000569895 FZD9O00144 591 aa29.21■■■□□ 2.27
RBFOX1-219ENST00000569895 TCERG1O14776 1098 aaKnown RBP29.2■■■□□ 2.26
RBFOX1-219ENST00000569895 BBOX1O75936 387 aa29.2■■■□□ 2.26
RBFOX1-219ENST00000569895 HTRA3P83110 453 aa29.2■■■□□ 2.26
RBFOX1-219ENST00000569895 CHADLQ6NUI6 762 aa29.2■■■□□ 2.26
RBFOX1-219ENST00000569895 KLRG1Q96E93 195 aa29.2■■■□□ 2.26
RBFOX1-219ENST00000569895 HCLS1P14317 486 aaPredicted RBP29.19■■■□□ 2.26
RBFOX1-219ENST00000569895 ATP6V0A2Q9Y487 856 aa29.19■■■□□ 2.26
RBFOX1-219ENST00000569895 EIF6P56537 245 aaKnown RBP29.18■■■□□ 2.26
RBFOX1-219ENST00000569895 DDX46Q7L014 1031 aaKnown RBP29.18■■■□□ 2.26
RBFOX1-219ENST00000569895 ZNF541Q9H0D2 1346 aa29.18■■■□□ 2.26
RBFOX1-219ENST00000569895 GPC2Q8N158 579 aa29.17■■■□□ 2.26
RBFOX1-219ENST00000569895 LARGE2Q8N3Y3 721 aa29.17■■■□□ 2.26
RBFOX1-219ENST00000569895 TAF1DQ9H5J8 278 aaPredicted RBP29.17■■■□□ 2.26
RBFOX1-219ENST00000569895 HACL1Q9UJ83 578 aa29.17■■■□□ 2.26
RBFOX1-219ENST00000569895 VPS33BQ9H267 617 aa29.16■■■□□ 2.26
RBFOX1-219ENST00000569895 SNED1Q8TER0 1413 aa29.16■■■□□ 2.26
RBFOX1-219ENST00000569895 ABCC4O15439 1325 aa29.16■■■□□ 2.26
RBFOX1-219ENST00000569895 ELL2O00472 640 aaPredicted RBP29.15■■■□□ 2.26
RBFOX1-219ENST00000569895 LDHDQ86WU2 507 aa29.15■■■□□ 2.26
RBFOX1-219ENST00000569895 SUPT20HQ8NEM7 779 aa29.15■■■□□ 2.26
RBFOX1-219ENST00000569895 ISCA1Q9BUE6 129 aa29.15■■■□□ 2.26
RBFOX1-219ENST00000569895 GOLGA2Q08379 1002 aa29.14■■■□□ 2.26
RBFOX1-219ENST00000569895 RIC3Q7Z5B4 369 aa29.14■■■□□ 2.26
RBFOX1-219ENST00000569895 SP8Q8IXZ3 490 aa29.14■■■□□ 2.26
RBFOX1-219ENST00000569895 TRIM28Q13263 835 aaKnown RBP29.13■■■□□ 2.25
RBFOX1-219ENST00000569895 PNMA8AQ86V59 439 aaPredicted RBP29.13■■■□□ 2.25
RBFOX1-219ENST00000569895 ZNF316A6NFI3 1004 aaPredicted RBP29.12■■■□□ 2.25
RBFOX1-219ENST00000569895 ATP5J2-PTCD1G3V325 749 aa29.12■■■□□ 2.25
RBFOX1-219ENST00000569895 GRAPQ13588 217 aa29.12■■■□□ 2.25
RBFOX1-219ENST00000569895 TMC4Q7Z404 712 aa29.12■■■□□ 2.25
RBFOX1-219ENST00000569895 NIM1KQ8IY84 436 aa29.12■■■□□ 2.25
RBFOX1-219ENST00000569895 GRAPLQ8TC17 118 aaPredicted RBP29.12■■■□□ 2.25
RBFOX1-219ENST00000569895 ANP32CO43423 234 aa29.11■■■□□ 2.25
RBFOX1-219ENST00000569895 POTEIP0CG38 1075 aa29.11■■■□□ 2.25
RBFOX1-219ENST00000569895 POTEJP0CG39 1038 aa29.11■■■□□ 2.25
RBFOX1-219ENST00000569895 EPHX2P34913 555 aa29.11■■■□□ 2.25
RBFOX1-219ENST00000569895 EAPPQ56P03 285 aaPredicted RBP29.11■■■□□ 2.25
RBFOX1-219ENST00000569895 CCDC30Q5VVM6 783 aa29.11■■■□□ 2.25
RBFOX1-219ENST00000569895 JMYQ8N9B5 988 aa29.11■■■□□ 2.25
RBFOX1-219ENST00000569895 ANKRD36CQ5JPF3 1778 aa29.11■■■□□ 2.25
RBFOX1-219ENST00000569895 PPIP5K2O43314 1243 aa29.1■■■□□ 2.25
RBFOX1-219ENST00000569895 CCDC27Q2M243 656 aa29.1■■■□□ 2.25
RBFOX1-219ENST00000569895 CCDC184Q52MB2 194 aa29.1■■■□□ 2.25
RBFOX1-219ENST00000569895 DPP8Q6V1X1 898 aaPredicted RBP29.1■■■□□ 2.25
RBFOX1-219ENST00000569895 C8orf58Q8NAV2 365 aa29.1■■■□□ 2.25
RBFOX1-219ENST00000569895 FAM89AQ96GI7 184 aa29.1■■■□□ 2.25
RBFOX1-219ENST00000569895 GJA3Q9Y6H8 435 aa29.1■■■□□ 2.25
RBFOX1-219ENST00000569895 SCN4AP35499 1836 aa29.09■■■□□ 2.25
RBFOX1-219ENST00000569895 HSP90B1P14625 803 aaKnown RBP29.09■■■□□ 2.25
RBFOX1-219ENST00000569895 MPNDQ8N594 471 aa29.09■■■□□ 2.25
RBFOX1-219ENST00000569895 RTFDC1Q9BY42 306 aaPredicted RBP29.09■■■□□ 2.25
RBFOX1-219ENST00000569895 CLEC11AQ9Y240 323 aa29.09■■■□□ 2.25
RBFOX1-219ENST00000569895 LMOD1P29536 600 aaPredicted RBP29.08■■■□□ 2.25
RBFOX1-219ENST00000569895 PHAXQ9H814 394 aaKnown RBP29.08■■■□□ 2.25
RBFOX1-219ENST00000569895 DDX58O95786 925 aaKnown RBP29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms