RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	SOGA3	Q5TF21	947 aa		11.25	□□□□□ -0.61
SCAPER-223	ENST00000569784	PRR5L	Q6MZQ0	368 aa		11.25	□□□□□ -0.61
SCAPER-223	ENST00000569784	TPTE2	Q6XPS3	522 aa		11.25	□□□□□ -0.61
SCAPER-223	ENST00000569784	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
SCAPER-223	ENST00000569784	TIAM2	Q8IVF5	1701 aa		11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	PRAMEF22	A3QJZ6	481 aa		11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	CAMTA2	O94983	1202 aa		11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	FSTL1	Q12841	308 aa		11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	ERFE	Q4G0M1	354 aa		11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	KIF6	Q6ZMV9	814 aa		11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	SMC1B	Q8NDV3	1235 aa		11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	MASTL	Q96GX5	879 aa		11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	MIS18A	Q9NYP9	233 aa		11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	COLQ	Q9Y215	455 aa	Predicted RBP	11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	DLG5	Q8TDM6	1919 aa		11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.24	□□□□□ -0.61
SCAPER-223	ENST00000569784	BCOR	Q6W2J9	1755 aa		11.23	□□□□□ -0.61
SCAPER-223	ENST00000569784	GLTPD2	A6NH11	291 aa		11.23	□□□□□ -0.61
SCAPER-223	ENST00000569784	VEGFA	P15692	232 aa	Predicted RBP	11.23	□□□□□ -0.61
SCAPER-223	ENST00000569784	STYK1	Q6J9G0	422 aa		11.23	□□□□□ -0.61
SCAPER-223	ENST00000569784	CLEC4G	Q6UXB4	293 aa		11.23	□□□□□ -0.61
SCAPER-223	ENST00000569784	TAOK3	Q9H2K8	898 aa		11.23	□□□□□ -0.61
SCAPER-223	ENST00000569784	RRP7A	Q9Y3A4	280 aa	Known RBP	11.23	□□□□□ -0.61
SCAPER-223	ENST00000569784	GOLGB1	Q14789	3259 aa	Known RBP	11.23	□□□□□ -0.61
SCAPER-223	ENST00000569784	ANKRD31	Q8N7Z5	1873 aa		11.23	□□□□□ -0.61
SCAPER-223	ENST00000569784	MYL6B	P14649	208 aa		11.22	□□□□□ -0.61
SCAPER-223	ENST00000569784	IRX5	P78411	483 aa	Predicted RBP	11.22	□□□□□ -0.61
SCAPER-223	ENST00000569784	MFRP	Q9BY79	579 aa		11.22	□□□□□ -0.61
SCAPER-223	ENST00000569784	TMX4	Q9H1E5	349 aa	Predicted RBP	11.22	□□□□□ -0.61
SCAPER-223	ENST00000569784	LAMB4	A4D0S4	1761 aa		11.21	□□□□□ -0.61
SCAPER-223	ENST00000569784	GOLGA2	Q08379	1002 aa		11.21	□□□□□ -0.61
SCAPER-223	ENST00000569784	LMOD3	Q0VAK6	560 aa		11.21	□□□□□ -0.61
SCAPER-223	ENST00000569784	MKRN3	Q13064	507 aa	Known RBP	11.21	□□□□□ -0.61
SCAPER-223	ENST00000569784	NFE2L2	Q16236	605 aa		11.21	□□□□□ -0.61
SCAPER-223	ENST00000569784	PRPF40B	Q6NWY9	871 aa	Known RBP	11.21	□□□□□ -0.61
SCAPER-223	ENST00000569784	NYX	Q9GZU5	481 aa		11.21	□□□□□ -0.61
SCAPER-223	ENST00000569784	TSPYL4	Q9UJ04	414 aa		11.21	□□□□□ -0.61
SCAPER-223	ENST00000569784	COL11A2	P13942	1736 aa	Predicted RBP	11.21	□□□□□ -0.62
SCAPER-223	ENST00000569784	WDR90	Q96KV7	1748 aa		11.21	□□□□□ -0.62
SCAPER-223	ENST00000569784	SRGN	P10124	158 aa		11.2	□□□□□ -0.62
SCAPER-223	ENST00000569784	NPR1	P16066	1061 aa		11.2	□□□□□ -0.62
SCAPER-223	ENST00000569784	WDR43	Q15061	677 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
SCAPER-223	ENST00000569784	RALBP1	Q15311	655 aa		11.2	□□□□□ -0.62
SCAPER-223	ENST00000569784	CCDC93	Q567U6	631 aa		11.2	□□□□□ -0.62
SCAPER-223	ENST00000569784	SLC39A7	Q92504	469 aa		11.2	□□□□□ -0.62
SCAPER-223	ENST00000569784	METRN	Q9UJH8	293 aa		11.2	□□□□□ -0.62
SCAPER-223	ENST00000569784	NFKBIE	O00221	500 aa		11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	C7	P10643	843 aa		11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	EIF2S2	P20042	333 aa	Known RBP	11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	ALDH1B1	P30837	517 aa		11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	RIPK4	P57078	832 aa		11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	NEUROD2	Q15784	382 aa		11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	IER5L	Q5T953	404 aa		11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	BBX	Q8WY36	941 aa	Predicted RBP	11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	RPGR	Q92834	1020 aa	Known RBP	11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	THUMPD2	Q9BTF0	503 aa	Known RBP	11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	LAS1L	Q9Y4W2	734 aa	Known RBP	11.19	□□□□□ -0.62
SCAPER-223	ENST00000569784	DICER1	Q9UPY3	1922 aa	Known RBP	11.18	□□□□□ -0.62
SCAPER-223	ENST00000569784	DDX10	Q13206	875 aa	Known RBP	11.18	□□□□□ -0.62
SCAPER-223	ENST00000569784	PDCD7	Q8N8D1	485 aa	Known RBP	11.18	□□□□□ -0.62
SCAPER-223	ENST00000569784	FBXO22	Q8NEZ5	403 aa		11.18	□□□□□ -0.62
SCAPER-223	ENST00000569784	MS4A4A	Q96JQ5	239 aa		11.18	□□□□□ -0.62
SCAPER-223	ENST00000569784	ZBTB3	Q9H5J0	574 aa		11.18	□□□□□ -0.62
SCAPER-223	ENST00000569784	SLX4	Q8IY92	1834 aa		11.18	□□□□□ -0.62
SCAPER-223	ENST00000569784	KDM3B	Q7LBC6	1761 aa		11.18	□□□□□ -0.62
SCAPER-223	ENST00000569784	ARFGEF2	Q9Y6D5	1785 aa		11.18	□□□□□ -0.62
SCAPER-223	ENST00000569784	FER1L6	Q2WGJ9	1857 aa		11.17	□□□□□ -0.62
SCAPER-223	ENST00000569784	NBPF26	B4DH59	902 aa		11.17	□□□□□ -0.62
SCAPER-223	ENST00000569784	GPT	P24298	496 aa		11.17	□□□□□ -0.62
SCAPER-223	ENST00000569784	HTRA3	P83110	453 aa		11.17	□□□□□ -0.62
SCAPER-223	ENST00000569784	HLF	Q16534	295 aa		11.17	□□□□□ -0.62
SCAPER-223	ENST00000569784	NBPF10	Q6P3W6	841 aa	Known RBP	11.17	□□□□□ -0.62
SCAPER-223	ENST00000569784	PPP1R42	Q7Z4L9	355 aa		11.17	□□□□□ -0.62
SCAPER-223	ENST00000569784	RTKN2	Q8IZC4	609 aa		11.17	□□□□□ -0.62
SCAPER-223	ENST00000569784	NBPF15	Q8N660	670 aa		11.17	□□□□□ -0.62
SCAPER-223	ENST00000569784	NUP98	P52948	1817 aa		11.16	□□□□□ -0.62
SCAPER-223	ENST00000569784	MAP3K15	Q6ZN16	1313 aa		11.16	□□□□□ -0.62
SCAPER-223	ENST00000569784	IQCA1L	A6NCM1	817 aa		11.16	□□□□□ -0.62
SCAPER-223	ENST00000569784	ERVV-1	B6SEH8	477 aa		11.16	□□□□□ -0.62
SCAPER-223	ENST00000569784	POTEB2	H3BUK9	544 aa		11.16	□□□□□ -0.62
SCAPER-223	ENST00000569784	EIF4A1	P60842	406 aa	Known RBP	11.16	□□□□□ -0.62
SCAPER-223	ENST00000569784	IFFO2	Q5TF58	517 aa		11.16	□□□□□ -0.62
SCAPER-223	ENST00000569784	NUTM1	Q86Y26	1132 aa		11.16	□□□□□ -0.62
SCAPER-223	ENST00000569784	JDP2	Q8WYK2	163 aa		11.16	□□□□□ -0.62
SCAPER-223	ENST00000569784	PLEKHF1	Q96S99	279 aa		11.16	□□□□□ -0.62
SCAPER-223	ENST00000569784	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	LTBP3	Q9NS15	1303 aa		11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	TCERG1	O14776	1098 aa	Known RBP	11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	GTPBP6	O43824	516 aa	Predicted RBP	11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	DDN	O94850	711 aa	Predicted RBP	11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	AIMP1	Q12904	312 aa	Known RBP	11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	EAPP	Q56P03	285 aa	Predicted RBP	11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	CCDC146	Q8IYE0	955 aa		11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	NECTIN2	Q92692	538 aa		11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	KLRG1	Q96E93	195 aa		11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	RBM17	Q96I25	401 aa	Known RBP	11.15	□□□□□ -0.62
SCAPER-223	ENST00000569784	PRELP	P51888	382 aa		11.14	□□□□□ -0.63
SCAPER-223	ENST00000569784	TTLL7	Q6ZT98	887 aa		11.14	□□□□□ -0.63
SCAPER-223	ENST00000569784	OCEL1	Q9H607	264 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms