RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 RAB11FIP3O75154 756 aa13.51□□□□□ -0.25
PDXDC1-216ENST00000569715 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.51□□□□□ -0.25
PDXDC1-216ENST00000569715 PDE1AP54750 535 aa13.51□□□□□ -0.25
PDXDC1-216ENST00000569715 OS9Q13438 667 aaPredicted RBP13.51□□□□□ -0.25
PDXDC1-216ENST00000569715 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
PDXDC1-216ENST00000569715 SIL1Q9H173 461 aa13.51□□□□□ -0.25
PDXDC1-216ENST00000569715 TAF1LQ8IZX4 1826 aa13.51□□□□□ -0.25
PDXDC1-216ENST00000569715 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
PDXDC1-216ENST00000569715 RFX5P48382 616 aaPredicted RBP13.5□□□□□ -0.25
PDXDC1-216ENST00000569715 TRIM28Q13263 835 aaKnown RBP13.5□□□□□ -0.25
PDXDC1-216ENST00000569715 LMBR1LQ6UX01 489 aa13.5□□□□□ -0.25
PDXDC1-216ENST00000569715 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
PDXDC1-216ENST00000569715 KIF1BPQ96EK5 621 aa13.5□□□□□ -0.25
PDXDC1-216ENST00000569715 UBN2Q6ZU65 1347 aa13.5□□□□□ -0.25
PDXDC1-216ENST00000569715 NLRP10Q86W26 655 aa13.5□□□□□ -0.25
PDXDC1-216ENST00000569715 FAM89AQ96GI7 184 aa13.5□□□□□ -0.25
PDXDC1-216ENST00000569715 BCORQ6W2J9 1755 aa13.5□□□□□ -0.25
PDXDC1-216ENST00000569715 MX1P20591 662 aa13.49□□□□□ -0.25
PDXDC1-216ENST00000569715 ERVV-1B6SEH8 477 aa13.49□□□□□ -0.25
PDXDC1-216ENST00000569715 SASH1O94885 1247 aa13.49□□□□□ -0.25
PDXDC1-216ENST00000569715 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
PDXDC1-216ENST00000569715 HSP90AB4PQ58FF6 505 aa13.49□□□□□ -0.25
PDXDC1-216ENST00000569715 CHMP3Q9Y3E7 222 aa13.49□□□□□ -0.25
PDXDC1-216ENST00000569715 PTPN12Q05209 780 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-216ENST00000569715 KRT27Q7Z3Y8 459 aa13.48□□□□□ -0.25
PDXDC1-216ENST00000569715 OSBPL3Q9H4L5 887 aa13.48□□□□□ -0.25
PDXDC1-216ENST00000569715 CCNL1Q9UK58 526 aaPredicted RBP13.48□□□□□ -0.25
PDXDC1-216ENST00000569715 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
PDXDC1-216ENST00000569715 ANP32AP39687 249 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-216ENST00000569715 HSP90AB3PQ58FF7 597 aa13.48□□□□□ -0.25
PDXDC1-216ENST00000569715 CNTNAP4Q9C0A0 1308 aa13.47□□□□□ -0.25
PDXDC1-216ENST00000569715 SDSP20132 328 aa13.47□□□□□ -0.25
PDXDC1-216ENST00000569715 TBC1D9Q6ZT07 1266 aa13.47□□□□□ -0.25
PDXDC1-216ENST00000569715 AMIGO3Q86WK7 504 aa13.47□□□□□ -0.25
PDXDC1-216ENST00000569715 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
PDXDC1-216ENST00000569715 ZBTB38Q8NAP3 1195 aaPredicted RBP13.47□□□□□ -0.25
PDXDC1-216ENST00000569715 MYH3P11055 1940 aa13.47□□□□□ -0.25
PDXDC1-216ENST00000569715 G3BP1Q13283 466 aaKnown RBP eCLIP13.47□□□□□ -0.251e-7■■□□□ 13.3
PDXDC1-216ENST00000569715 ZNF772Q68DY9 489 aaPredicted RBP13.47□□□□□ -0.25
PDXDC1-216ENST00000569715 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
PDXDC1-216ENST00000569715 COPRSQ9NQ92 184 aa13.47□□□□□ -0.25
PDXDC1-216ENST00000569715 MFAP1P55081 439 aaKnown RBP13.46□□□□□ -0.25
PDXDC1-216ENST00000569715 STAP2Q9UGK3 403 aa13.46□□□□□ -0.25
PDXDC1-216ENST00000569715 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
PDXDC1-216ENST00000569715 CCDC85AQ96PX6 553 aaPredicted RBP13.46□□□□□ -0.25
PDXDC1-216ENST00000569715 SCN7AQ01118 1682 aa13.46□□□□□ -0.25
PDXDC1-216ENST00000569715 C4BP0C0L5 1744 aa13.46□□□□□ -0.26
PDXDC1-216ENST00000569715 ERC1Q8IUD2 1116 aa13.46□□□□□ -0.26
PDXDC1-216ENST00000569715 TRIM37O94972 964 aa13.45□□□□□ -0.26
PDXDC1-216ENST00000569715 ZNF594Q96JF6 807 aaPredicted RBP13.45□□□□□ -0.26
PDXDC1-216ENST00000569715 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
PDXDC1-216ENST00000569715 FAM177BA6PVY3 158 aa13.45□□□□□ -0.26
PDXDC1-216ENST00000569715 CDC45O75419 566 aa13.45□□□□□ -0.26
PDXDC1-216ENST00000569715 FAM196AQ6ZSG2 479 aa13.45□□□□□ -0.26
PDXDC1-216ENST00000569715 LRRC4BQ9NT99 713 aa13.45□□□□□ -0.26
PDXDC1-216ENST00000569715 GNPATO15228 680 aa13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 SUSD4Q5VX71 490 aa13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 CLASRPQ8N2M8 674 aaKnown RBP13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 EAF2Q96CJ1 260 aaPredicted RBP13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 TLR7Q9NYK1 1049 aaKnown RBP13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 CDHR2Q9BYE9 1310 aa13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 AACSQ86V21 672 aa13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 PI4K2BQ8TCG2 481 aa13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 AK9Q5TCS8 1911 aa13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 MSH5O43196 834 aa13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 PLA2G12BQ9BX93 195 aa13.44□□□□□ -0.26
PDXDC1-216ENST00000569715 DDX60Q8IY21 1712 aaKnown RBP13.43□□□□□ -0.26
PDXDC1-216ENST00000569715 IRS4O14654 1257 aaPredicted RBP13.43□□□□□ -0.26
PDXDC1-216ENST00000569715 TFCP2Q12800 502 aa13.43□□□□□ -0.26
PDXDC1-216ENST00000569715 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
PDXDC1-216ENST00000569715 AOX1Q06278 1338 aa13.43□□□□□ -0.26
PDXDC1-216ENST00000569715 MAP4K4O95819 1239 aaPredicted RBP13.43□□□□□ -0.26
PDXDC1-216ENST00000569715 CCDC8Q9H0W5 538 aaPredicted RBP13.43□□□□□ -0.26
PDXDC1-216ENST00000569715 SRP68Q9UHB9 627 aaKnown RBP13.43□□□□□ -0.26
PDXDC1-216ENST00000569715 NIP7Q9Y221 180 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDXDC1-216ENST00000569715 RPS6KA4O75676 772 aa13.42□□□□□ -0.26
PDXDC1-216ENST00000569715 ATG9AQ7Z3C6 839 aa13.42□□□□□ -0.26
PDXDC1-216ENST00000569715 TBC1D32Q96NH3 1257 aa13.42□□□□□ -0.26
PDXDC1-216ENST00000569715 LRRC24Q50LG9 513 aa13.42□□□□□ -0.26
PDXDC1-216ENST00000569715 PUS3Q9BZE2 481 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-216ENST00000569715 RGS17Q9UGC6 210 aaPredicted RBP13.42□□□□□ -0.26
PDXDC1-216ENST00000569715 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-216ENST00000569715 CSF1RP07333 972 aa13.42□□□□□ -0.26
PDXDC1-216ENST00000569715 IFIT2P09913 472 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-216ENST00000569715 BCL2L12Q9HB09 334 aa13.42□□□□□ -0.26
PDXDC1-216ENST00000569715 CTSWP56202 376 aa13.41□□□□□ -0.26
PDXDC1-216ENST00000569715 TRIM6-TRIM34B2RNG4 842 aa13.41□□□□□ -0.26
PDXDC1-216ENST00000569715 TTLL11Q8NHH1 800 aa13.41□□□□□ -0.26
PDXDC1-216ENST00000569715 IPO9Q96P70 1041 aaKnown RBP13.41□□□□□ -0.26
PDXDC1-216ENST00000569715 GREM2Q9H772 168 aa13.41□□□□□ -0.26
PDXDC1-216ENST00000569715 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
PDXDC1-216ENST00000569715 LAMB2P55268 1798 aa13.41□□□□□ -0.26
PDXDC1-216ENST00000569715 NTSR2O95665 410 aa13.41□□□□□ -0.26
PDXDC1-216ENST00000569715 HCLS1P14317 486 aaPredicted RBP13.41□□□□□ -0.26
PDXDC1-216ENST00000569715 RILPL2Q969X0 211 aa13.41□□□□□ -0.26
PDXDC1-216ENST00000569715 CASZ1Q86V15 1759 aa13.4□□□□□ -0.26
PDXDC1-216ENST00000569715 USPL1Q5W0Q7 1092 aa13.4□□□□□ -0.26
PDXDC1-216ENST00000569715 UBR3Q6ZT12 1888 aa13.4□□□□□ -0.26
PDXDC1-216ENST00000569715 PHF14O94880 888 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms