RNA–Protein interactions for RNA: ENST00000569506.1

NEIL1-223, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-223ENST00000569506 ISCA1Q9BUE6 129 aa20.44■□□□□ 0.86
NEIL1-223ENST00000569506 USP44Q9H0E7 712 aa20.44■□□□□ 0.86
NEIL1-223ENST00000569506 HDAC5Q9UQL6 1122 aa20.44■□□□□ 0.86
NEIL1-223ENST00000569506 ZNF652Q9Y2D9 606 aa20.44■□□□□ 0.86
NEIL1-223ENST00000569506 CLEC4GQ6UXB4 293 aa20.43■□□□□ 0.86
NEIL1-223ENST00000569506 CCDC191Q8NCU4 936 aa20.43■□□□□ 0.86
NEIL1-223ENST00000569506 ARHGEF1Q92888 912 aaKnown RBP20.43■□□□□ 0.86
NEIL1-223ENST00000569506 MEIS3Q99687 375 aa20.43■□□□□ 0.86
NEIL1-223ENST00000569506 NARFQ9UHQ1 456 aa20.43■□□□□ 0.86
NEIL1-223ENST00000569506 ATP5J2-PTCD1G3V325 749 aa20.42■□□□□ 0.86
NEIL1-223ENST00000569506 ZPR1O75312 459 aa20.42■□□□□ 0.86
NEIL1-223ENST00000569506 GCKRQ14397 625 aa20.42■□□□□ 0.86
NEIL1-223ENST00000569506 CWC25Q9NXE8 425 aaPredicted RBP20.42■□□□□ 0.86
NEIL1-223ENST00000569506 C9orf78Q9NZ63 289 aaPredicted RBP20.42■□□□□ 0.86
NEIL1-223ENST00000569506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.41■□□□□ 0.86
NEIL1-223ENST00000569506 GRM8O00222 908 aa20.41■□□□□ 0.86
NEIL1-223ENST00000569506 GNAI2P04899 355 aa20.41■□□□□ 0.86
NEIL1-223ENST00000569506 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
NEIL1-223ENST00000569506 RFC4P35249 363 aa20.41■□□□□ 0.86
NEIL1-223ENST00000569506 FLAD1Q8NFF5 587 aa20.41■□□□□ 0.86
NEIL1-223ENST00000569506 UTYO14607 1347 aa20.41■□□□□ 0.86
NEIL1-223ENST00000569506 UBR3Q6ZT12 1888 aa20.41■□□□□ 0.86
NEIL1-223ENST00000569506 PHF14O94880 888 aa20.4■□□□□ 0.86
NEIL1-223ENST00000569506 CCDC136Q96JN2 1154 aa20.4■□□□□ 0.86
NEIL1-223ENST00000569506 NUP98P52948 1817 aa20.39■□□□□ 0.86
NEIL1-223ENST00000569506 BCORQ6W2J9 1755 aa20.39■□□□□ 0.86
NEIL1-223ENST00000569506 USP42Q9H9J4 1324 aaKnown RBP20.39■□□□□ 0.85
NEIL1-223ENST00000569506 MSH5O43196 834 aa20.39■□□□□ 0.85
NEIL1-223ENST00000569506 USPL1Q5W0Q7 1092 aa20.39■□□□□ 0.85
NEIL1-223ENST00000569506 AMIGO3Q86WK7 504 aa20.39■□□□□ 0.85
NEIL1-223ENST00000569506 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.85
NEIL1-223ENST00000569506 ZNF34Q8IZ26 560 aa20.39■□□□□ 0.85
NEIL1-223ENST00000569506 PARP10Q53GL7 1025 aa20.38■□□□□ 0.85
NEIL1-223ENST00000569506 SMIM5Q71RC9 77 aa20.38■□□□□ 0.85
NEIL1-223ENST00000569506 PCDHB15Q9Y5E8 787 aa20.38■□□□□ 0.85
NEIL1-223ENST00000569506 AFDNP55196 1824 aaKnown RBP20.38■□□□□ 0.85
NEIL1-223ENST00000569506 ANKRD36CQ5JPF3 1778 aa20.37■□□□□ 0.85
NEIL1-223ENST00000569506 H7C1W4 665 aa20.37■□□□□ 0.85
NEIL1-223ENST00000569506 NBPF7P0C2Y1 421 aaPredicted RBP20.37■□□□□ 0.85
NEIL1-223ENST00000569506 NLRP10Q86W26 655 aa20.37■□□□□ 0.85
NEIL1-223ENST00000569506 C1orf115Q9H7X2 142 aa20.37■□□□□ 0.85
NEIL1-223ENST00000569506 GPBP1L1Q9HC44 474 aaPredicted RBP20.37■□□□□ 0.85
NEIL1-223ENST00000569506 SRP68Q9UHB9 627 aaKnown RBP20.37■□□□□ 0.85
NEIL1-223ENST00000569506 CD2APQ9Y5K6 639 aa20.37■□□□□ 0.85
NEIL1-223ENST00000569506 SCN7AQ01118 1682 aa20.37■□□□□ 0.85
NEIL1-223ENST00000569506 GPTP24298 496 aa20.36■□□□□ 0.85
NEIL1-223ENST00000569506 B4GALNT3Q6L9W6 998 aa20.36■□□□□ 0.85
NEIL1-223ENST00000569506 RPAP2Q8IXW5 612 aaPredicted RBP20.36■□□□□ 0.85
NEIL1-223ENST00000569506 BCL2L12Q9HB09 334 aa20.36■□□□□ 0.85
NEIL1-223ENST00000569506 HSPA6P17066 643 aa20.35■□□□□ 0.85
NEIL1-223ENST00000569506 MSL1Q68DK7 614 aa20.35■□□□□ 0.85
NEIL1-223ENST00000569506 RWDD1Q9H446 243 aaPredicted RBP20.35■□□□□ 0.85
NEIL1-223ENST00000569506 NIP7Q9Y221 180 aaKnown RBP eCLIP20.35■□□□□ 0.85
NEIL1-223ENST00000569506 LRRFIP2Q9Y608 721 aaKnown RBP20.35■□□□□ 0.85
NEIL1-223ENST00000569506 C4AP0C0L4 1744 aa20.35■□□□□ 0.85
NEIL1-223ENST00000569506 PCCAP05165 728 aaPredicted RBP20.34■□□□□ 0.85
NEIL1-223ENST00000569506 HDAC1Q13547 482 aaPredicted RBP20.34■□□□□ 0.85
NEIL1-223ENST00000569506 ZBTB38Q8NAP3 1195 aaPredicted RBP20.34■□□□□ 0.85
NEIL1-223ENST00000569506 UBN2Q6ZU65 1347 aa20.33■□□□□ 0.85
NEIL1-223ENST00000569506 CASP7P55210 303 aa20.33■□□□□ 0.85
NEIL1-223ENST00000569506 CEP85Q6P2H3 762 aa20.33■□□□□ 0.85
NEIL1-223ENST00000569506 UBE3BQ7Z3V4 1068 aa20.33■□□□□ 0.85
NEIL1-223ENST00000569506 PPP1R42Q7Z4L9 355 aa20.33■□□□□ 0.85
NEIL1-223ENST00000569506 ANKRD44Q8N8A2 993 aa20.33■□□□□ 0.85
NEIL1-223ENST00000569506 SUCLG2Q96I99 432 aa20.32■□□□□ 0.84
NEIL1-223ENST00000569506 UTP14AQ9BVJ6 771 aaKnown RBP20.32■□□□□ 0.84
NEIL1-223ENST00000569506 GYS1P13807 737 aa20.31■□□□□ 0.84
NEIL1-223ENST00000569506 ATP8B2P98198 1209 aa20.31■□□□□ 0.84
NEIL1-223ENST00000569506 SUSD4Q5VX71 490 aa20.31■□□□□ 0.84
NEIL1-223ENST00000569506 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
NEIL1-223ENST00000569506 SETDB2Q96T68 719 aa20.31■□□□□ 0.84
NEIL1-223ENST00000569506 TRMT112Q9UI30 125 aaKnown RBP20.31■□□□□ 0.84
NEIL1-223ENST00000569506 CDHR2Q9BYE9 1310 aa20.3■□□□□ 0.84
NEIL1-223ENST00000569506 HMMRO75330 724 aa20.3■□□□□ 0.84
NEIL1-223ENST00000569506 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
NEIL1-223ENST00000569506 IGHDP01880 384 aa20.29■□□□□ 0.84
NEIL1-223ENST00000569506 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
NEIL1-223ENST00000569506 SIRT2Q8IXJ6 389 aa20.29■□□□□ 0.84
NEIL1-223ENST00000569506 JARID2Q92833 1246 aaPredicted RBP20.29■□□□□ 0.84
NEIL1-223ENST00000569506 FAM89AQ96GI7 184 aa20.29■□□□□ 0.84
NEIL1-223ENST00000569506 KAZALD1Q96I82 304 aa20.29■□□□□ 0.84
NEIL1-223ENST00000569506 NYXQ9GZU5 481 aa20.29■□□□□ 0.84
NEIL1-223ENST00000569506 SH3TC1Q8TE82 1336 aa20.28■□□□□ 0.84
NEIL1-223ENST00000569506 MTX1Q13505 466 aa20.28■□□□□ 0.84
NEIL1-223ENST00000569506 BICDL1Q6ZP65 573 aa20.28■□□□□ 0.84
NEIL1-223ENST00000569506 PLA2G12BQ9BX93 195 aa20.28■□□□□ 0.84
NEIL1-223ENST00000569506 BICC1Q9H694 974 aaKnown RBP20.28■□□□□ 0.84
NEIL1-223ENST00000569506 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.84
NEIL1-223ENST00000569506 NTSR2O95665 410 aa20.27■□□□□ 0.84
NEIL1-223ENST00000569506 RABL6Q3YEC7 729 aaPredicted RBP20.27■□□□□ 0.84
NEIL1-223ENST00000569506 RTL5Q5HYW3 569 aaPredicted RBP20.27■□□□□ 0.84
NEIL1-223ENST00000569506 NLGN1Q8N2Q7 840 aa20.27■□□□□ 0.84
NEIL1-223ENST00000569506 ZNF526Q8TF50 670 aaPredicted RBP20.27■□□□□ 0.84
NEIL1-223ENST00000569506 CARMIL3Q8ND23 1372 aa20.26■□□□□ 0.83
NEIL1-223ENST00000569506 NFIXQ14938 502 aa20.26■□□□□ 0.83
NEIL1-223ENST00000569506 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
NEIL1-223ENST00000569506 IRS4O14654 1257 aaPredicted RBP20.25■□□□□ 0.83
NEIL1-223ENST00000569506 TM4SF1P30408 202 aa20.25■□□□□ 0.83
NEIL1-223ENST00000569506 FOXO4P98177 505 aa20.25■□□□□ 0.83
NEIL1-223ENST00000569506 EPHA10Q5JZY3 1008 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms