RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 USP42Q9H9J4 1324 aaKnown RBP25.63■■□□□ 1.69
SPSB3-211ENST00000569380 GNAI3P08754 354 aa25.63■■□□□ 1.69
SPSB3-211ENST00000569380 RFC4P35249 363 aa25.63■■□□□ 1.69
SPSB3-211ENST00000569380 UBE3BQ7Z3V4 1068 aa25.63■■□□□ 1.69
SPSB3-211ENST00000569380 NLRP10Q86W26 655 aa25.63■■□□□ 1.69
SPSB3-211ENST00000569380 SYNE4Q8N205 404 aa25.63■■□□□ 1.69
SPSB3-211ENST00000569380 SUCLG2Q96I99 432 aa25.63■■□□□ 1.69
SPSB3-211ENST00000569380 SPON1Q9HCB6 807 aa25.63■■□□□ 1.69
SPSB3-211ENST00000569380 FAM177BA6PVY3 158 aa25.62■■□□□ 1.69
SPSB3-211ENST00000569380 ZPR1O75312 459 aa25.61■■□□□ 1.69
SPSB3-211ENST00000569380 GNAI2P04899 355 aa25.61■■□□□ 1.69
SPSB3-211ENST00000569380 BICDL1Q6ZP65 573 aa25.61■■□□□ 1.69
SPSB3-211ENST00000569380 CCDC191Q8NCU4 936 aa25.61■■□□□ 1.69
SPSB3-211ENST00000569380 KAZALD1Q96I82 304 aa25.61■■□□□ 1.69
SPSB3-211ENST00000569380 UTYO14607 1347 aa25.61■■□□□ 1.69
SPSB3-211ENST00000569380 SSFA2P28290 1259 aa25.61■■□□□ 1.69
SPSB3-211ENST00000569380 CASP7P55210 303 aa25.61■■□□□ 1.69
SPSB3-211ENST00000569380 TBC1D9BQ66K14 1250 aa25.61■■□□□ 1.69
SPSB3-211ENST00000569380 CHMP4BQ9H444 224 aaKnown RBP25.61■■□□□ 1.69
SPSB3-211ENST00000569380 AAMPQ13685 434 aa25.6■■□□□ 1.69
SPSB3-211ENST00000569380 HSP90AB3PQ58FF7 597 aa25.6■■□□□ 1.69
SPSB3-211ENST00000569380 CEP85Q6P2H3 762 aa25.6■■□□□ 1.69
SPSB3-211ENST00000569380 COL23A1Q86Y22 540 aaPredicted RBP25.6■■□□□ 1.69
SPSB3-211ENST00000569380 NIP7Q9Y221 180 aaKnown RBP eCLIP25.6■■□□□ 1.69
SPSB3-211ENST00000569380 TRIM28Q13263 835 aaKnown RBP25.59■■□□□ 1.69
SPSB3-211ENST00000569380 EPHA10Q5JZY3 1008 aa25.59■■□□□ 1.69
SPSB3-211ENST00000569380 SUSD4Q5VX71 490 aa25.59■■□□□ 1.69
SPSB3-211ENST00000569380 H7C1W4 665 aa25.59■■□□□ 1.69
SPSB3-211ENST00000569380 ADRA2BP18089 450 aa25.59■■□□□ 1.69
SPSB3-211ENST00000569380 FAM89AQ96GI7 184 aa25.59■■□□□ 1.69
SPSB3-211ENST00000569380 PNPLA7Q6ZV29 1317 aa25.58■■□□□ 1.69
SPSB3-211ENST00000569380 ATF5Q9Y2D1 282 aaPredicted RBP25.58■■□□□ 1.69
SPSB3-211ENST00000569380 ZNF652Q9Y2D9 606 aa25.57■■□□□ 1.68
SPSB3-211ENST00000569380 PNMA6EA0A0J9YXQ4 647 aa25.56■■□□□ 1.68
SPSB3-211ENST00000569380 CLEC4GQ6UXB4 293 aa25.56■■□□□ 1.68
SPSB3-211ENST00000569380 ANKRD44Q8N8A2 993 aa25.56■■□□□ 1.68
SPSB3-211ENST00000569380 KDM2BQ8NHM5 1336 aa25.56■■□□□ 1.68
SPSB3-211ENST00000569380 MSH5O43196 834 aa25.56■■□□□ 1.68
SPSB3-211ENST00000569380 BICC1Q9H694 974 aaKnown RBP25.56■■□□□ 1.68
SPSB3-211ENST00000569380 IBTKQ9P2D0 1353 aaPredicted RBP25.56■■□□□ 1.68
SPSB3-211ENST00000569380 GYS1P13807 737 aa25.55■■□□□ 1.68
SPSB3-211ENST00000569380 PTGER2P43116 358 aa25.55■■□□□ 1.68
SPSB3-211ENST00000569380 TRMT112Q9UI30 125 aaKnown RBP25.54■■□□□ 1.68
SPSB3-211ENST00000569380 PCCAP05165 728 aaPredicted RBP25.54■■□□□ 1.68
SPSB3-211ENST00000569380 SKAP1Q86WV1 359 aa25.53■■□□□ 1.68
SPSB3-211ENST00000569380 NUTM1Q86Y26 1132 aa25.53■■□□□ 1.68
SPSB3-211ENST00000569380 ZBTB38Q8NAP3 1195 aaPredicted RBP25.53■■□□□ 1.68
SPSB3-211ENST00000569380 MTFR1LQ9H019 292 aa25.53■■□□□ 1.68
SPSB3-211ENST00000569380 PPP1R1BQ9UD71 204 aaPredicted RBP25.53■■□□□ 1.68
SPSB3-211ENST00000569380 NTSR2O95665 410 aa25.51■■□□□ 1.67
SPSB3-211ENST00000569380 ATP8B2P98198 1209 aa25.51■■□□□ 1.67
SPSB3-211ENST00000569380 HDAC1Q13547 482 aaPredicted RBP25.51■■□□□ 1.67
SPSB3-211ENST00000569380 NFIXQ14938 502 aa25.51■■□□□ 1.67
SPSB3-211ENST00000569380 PPP1R42Q7Z4L9 355 aa25.51■■□□□ 1.67
SPSB3-211ENST00000569380 RPAP2Q8IXW5 612 aaPredicted RBP25.51■■□□□ 1.67
SPSB3-211ENST00000569380 COL24A1Q17RW2 1714 aa25.51■■□□□ 1.67
SPSB3-211ENST00000569380 QSER1Q2KHR3 1735 aa25.51■■□□□ 1.67
SPSB3-211ENST00000569380 FOXO4P98177 505 aa25.51■■□□□ 1.67
SPSB3-211ENST00000569380 CCDC24Q8N4L8 307 aa25.51■■□□□ 1.67
SPSB3-211ENST00000569380 RWDD1Q9H446 243 aaPredicted RBP25.51■■□□□ 1.67
SPSB3-211ENST00000569380 SGIP1Q9BQI5 828 aa25.5■■□□□ 1.67
SPSB3-211ENST00000569380 UTP14AQ9BVJ6 771 aaKnown RBP25.5■■□□□ 1.67
SPSB3-211ENST00000569380 HMGB2P26583 209 aaKnown RBP25.49■■□□□ 1.67
SPSB3-211ENST00000569380 PARP10Q53GL7 1025 aa25.49■■□□□ 1.67
SPSB3-211ENST00000569380 MSL1Q68DK7 614 aa25.49■■□□□ 1.67
SPSB3-211ENST00000569380 SETDB2Q96T68 719 aa25.49■■□□□ 1.67
SPSB3-211ENST00000569380 RGL2O15211 777 aa25.48■■□□□ 1.67
SPSB3-211ENST00000569380 SRGAP3O43295 1099 aa25.48■■□□□ 1.67
SPSB3-211ENST00000569380 HCLS1P14317 486 aaPredicted RBP25.48■■□□□ 1.67
SPSB3-211ENST00000569380 CCDC85AQ96PX6 553 aaPredicted RBP25.48■■□□□ 1.67
SPSB3-211ENST00000569380 DDX60Q8IY21 1712 aaKnown RBP25.47■■□□□ 1.67
SPSB3-211ENST00000569380 IRS4O14654 1257 aaPredicted RBP25.47■■□□□ 1.67
SPSB3-211ENST00000569380 CENPQQ7L2Z9 268 aaPredicted RBP25.47■■□□□ 1.67
SPSB3-211ENST00000569380 ERFEQ4G0M1 354 aa25.46■■□□□ 1.67
SPSB3-211ENST00000569380 LMBR1LQ6UX01 489 aa25.46■■□□□ 1.67
SPSB3-211ENST00000569380 SH3TC1Q8TE82 1336 aa25.46■■□□□ 1.67
SPSB3-211ENST00000569380 CDHR2Q9BYE9 1310 aa25.46■■□□□ 1.67
SPSB3-211ENST00000569380 ABCC12Q96J65 1359 aa25.45■■□□□ 1.66
SPSB3-211ENST00000569380 DDR1Q08345 913 aa25.45■■□□□ 1.66
SPSB3-211ENST00000569380 POLA2Q14181 598 aa25.45■■□□□ 1.66
SPSB3-211ENST00000569380 RABL6Q3YEC7 729 aaPredicted RBP25.45■■□□□ 1.66
SPSB3-211ENST00000569380 FLAD1Q8NFF5 587 aa25.45■■□□□ 1.66
SPSB3-211ENST00000569380 SSH3Q8TE77 659 aa25.45■■□□□ 1.66
SPSB3-211ENST00000569380 TM4SF1P30408 202 aa25.44■■□□□ 1.66
SPSB3-211ENST00000569380 MTX1Q13505 466 aa25.44■■□□□ 1.66
SPSB3-211ENST00000569380 KLHDC4Q8TBB5 520 aa25.44■■□□□ 1.66
SPSB3-211ENST00000569380 PA2G4Q9UQ80 394 aaKnown RBP25.44■■□□□ 1.66
SPSB3-211ENST00000569380 CHMP3Q9Y3E7 222 aa25.44■■□□□ 1.66
SPSB3-211ENST00000569380 NBPF5PQ86XG9 351 aaPredicted RBP25.44■■□□□ 1.66
SPSB3-211ENST00000569380 C3orf67Q6ZVT6 689 aa25.43■■□□□ 1.66
SPSB3-211ENST00000569380 EXOC6BQ9Y2D4 811 aa25.43■■□□□ 1.66
SPSB3-211ENST00000569380 MYH3P11055 1940 aa25.42■■□□□ 1.66
SPSB3-211ENST00000569380 CARMIL3Q8ND23 1372 aa25.42■■□□□ 1.66
SPSB3-211ENST00000569380 APBB1O00213 710 aa25.42■■□□□ 1.66
SPSB3-211ENST00000569380 PLA2G12BQ9BX93 195 aa25.42■■□□□ 1.66
SPSB3-211ENST00000569380 HDAC5Q9UQL6 1122 aa25.42■■□□□ 1.66
SPSB3-211ENST00000569380 LAMB2P55268 1798 aa25.42■■□□□ 1.66
SPSB3-211ENST00000569380 SMC5Q8IY18 1101 aa25.41■■□□□ 1.66
SPSB3-211ENST00000569380 DCTPP1Q9H773 170 aa25.41■■□□□ 1.66
SPSB3-211ENST00000569380 HMMRO75330 724 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms