RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 USTQ9Y2C2 406 aa6.4□□□□□ -1.38
HMGB1P6-201ENST00000569046 NEURL1BA8MQ27 555 aa6.39□□□□□ -1.39
HMGB1P6-201ENST00000569046 OPLAHO14841 1288 aa6.39□□□□□ -1.39
HMGB1P6-201ENST00000569046 MICAL2O94851 1124 aa6.39□□□□□ -1.39
HMGB1P6-201ENST00000569046 BCRP11274 1271 aa6.39□□□□□ -1.39
HMGB1P6-201ENST00000569046 PCBP4P57723 403 aaKnown RBP6.39□□□□□ -1.39
HMGB1P6-201ENST00000569046 RAB44Q7Z6P3 723 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P6-201ENST00000569046 KCNH4Q9UQ05 1017 aa6.39□□□□□ -1.39
HMGB1P6-201ENST00000569046 USP20Q9Y2K6 914 aa6.39□□□□□ -1.39
HMGB1P6-201ENST00000569046 SHISA8B8ZZ34 492 aa6.38□□□□□ -1.39
HMGB1P6-201ENST00000569046 OIP5O43482 229 aa6.38□□□□□ -1.39
HMGB1P6-201ENST00000569046 ARAFP10398 606 aa6.38□□□□□ -1.39
HMGB1P6-201ENST00000569046 FCHSD1Q86WN1 690 aa6.38□□□□□ -1.39
HMGB1P6-201ENST00000569046 TREML1Q86YW5 311 aa6.38□□□□□ -1.39
HMGB1P6-201ENST00000569046 ZBTB39O15060 712 aa6.37□□□□□ -1.39
HMGB1P6-201ENST00000569046 SPEM2Q0P670 501 aa6.37□□□□□ -1.39
HMGB1P6-201ENST00000569046 ZNF468Q5VIY5 522 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P6-201ENST00000569046 GOLGA6L1Q8N7Z2 621 aa6.37□□□□□ -1.39
HMGB1P6-201ENST00000569046 GALNT6Q8NCL4 622 aa6.37□□□□□ -1.39
HMGB1P6-201ENST00000569046 GDF2Q9UK05 429 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P6-201ENST00000569046 PRR12Q9ULL5 1215 aa6.37□□□□□ -1.39
HMGB1P6-201ENST00000569046 ADAMTS8Q9UP79 889 aa6.37□□□□□ -1.39
HMGB1P6-201ENST00000569046 DNMT3AQ9Y6K1 912 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P6-201ENST00000569046 BRD2P25440 801 aaKnown RBP6.36□□□□□ -1.39
HMGB1P6-201ENST00000569046 ARSDP51689 593 aa6.36□□□□□ -1.39
HMGB1P6-201ENST00000569046 MTMR3Q13615 1198 aa6.36□□□□□ -1.39
HMGB1P6-201ENST00000569046 SLCO4C1Q6ZQN7 724 aa6.36□□□□□ -1.39
HMGB1P6-201ENST00000569046 SYT9Q86SS6 491 aa6.36□□□□□ -1.39
HMGB1P6-201ENST00000569046 GTF3C2Q8WUA4 911 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P6-201ENST00000569046 EDARADDQ8WWZ3 215 aa6.36□□□□□ -1.39
HMGB1P6-201ENST00000569046 GSX2Q9BZM3 304 aa6.36□□□□□ -1.39
HMGB1P6-201ENST00000569046 AVENQ9NQS1 362 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P6-201ENST00000569046 EPXP11678 715 aa6.35□□□□□ -1.39
HMGB1P6-201ENST00000569046 ADH6P28332 368 aa6.35□□□□□ -1.39
HMGB1P6-201ENST00000569046 MAP3K10Q02779 954 aa6.35□□□□□ -1.39
HMGB1P6-201ENST00000569046 RGL4Q8IZJ4 473 aa6.35□□□□□ -1.39
HMGB1P6-201ENST00000569046 MDFIQ99750 246 aa6.35□□□□□ -1.39
HMGB1P6-201ENST00000569046 LRRC4BQ9NT99 713 aa6.35□□□□□ -1.39
HMGB1P6-201ENST00000569046 STIM2Q9P246 746 aa6.35□□□□□ -1.39
HMGB1P6-201ENST00000569046 FAM181BA6NEQ2 426 aa6.34□□□□□ -1.39
HMGB1P6-201ENST00000569046 HELQQ8TDG4 1101 aa6.34□□□□□ -1.39
HMGB1P6-201ENST00000569046 BHMTQ93088 406 aa6.34□□□□□ -1.39
HMGB1P6-201ENST00000569046 RTCBQ9Y3I0 505 aaKnown RBP6.34□□□□□ -1.39
HMGB1P6-201ENST00000569046 KCNMB2Q9Y691 235 aa6.34□□□□□ -1.39
HMGB1P6-201ENST00000569046 SIN3BO75182 1162 aa6.33□□□□□ -1.4
HMGB1P6-201ENST00000569046 HOXB4P17483 251 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P6-201ENST00000569046 ZAP70P43403 619 aa6.33□□□□□ -1.4
HMGB1P6-201ENST00000569046 CCINQ13939 588 aa6.33□□□□□ -1.4
HMGB1P6-201ENST00000569046 ATCAYQ86WG3 371 aa6.33□□□□□ -1.4
HMGB1P6-201ENST00000569046 CMTR1Q8N1G2 835 aaKnown RBP6.33□□□□□ -1.4
HMGB1P6-201ENST00000569046 NEDD1Q8NHV4 660 aa6.33□□□□□ -1.4
HMGB1P6-201ENST00000569046 ZFATQ9P243 1243 aa6.33□□□□□ -1.4
HMGB1P6-201ENST00000569046 EPB42P16452 691 aa6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 NFKB1P19838 968 aa6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 MPSTP25325 297 aa6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 TARSP26639 723 aaKnown RBP6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 SNRPNP63162 240 aaKnown RBP6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 ZNF211Q13398 564 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 TRIP4Q15650 581 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 KRT25Q7Z3Z0 450 aa6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 TNFRSF25Q93038 417 aa6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 BTBD6Q96KE9 485 aa6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 ANO2Q9NQ90 1003 aa6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 ENAMQ9NRM1 1142 aa6.32□□□□□ -1.4
HMGB1P6-201ENST00000569046 SASH3O75995 380 aa6.31□□□□□ -1.4
HMGB1P6-201ENST00000569046 SERPINB4P48594 390 aa6.31□□□□□ -1.4
HMGB1P6-201ENST00000569046 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P6-201ENST00000569046 CNTNAP5Q8WYK1 1306 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 ELOA3CA0A087WX78 387 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 ELOA3DA6NLF2 546 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 ADARB2-AS1A8MUL3 147 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 XYLBO75191 536 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 ABL1P00519 1130 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 EGFRP00533 1210 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 GSK3AP49840 483 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 ELOA3BQ3SY89 546 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 CHSY3Q70JA7 882 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 ABTB2Q8N961 1025 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 ELOA3Q8NG57 546 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 GPR152Q8TDT2 470 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 STARD13Q9Y3M8 1113 aa6.3□□□□□ -1.4
HMGB1P6-201ENST00000569046 NPR3P17342 541 aa6.29□□□□□ -1.4
HMGB1P6-201ENST00000569046 ADH7P40394 386 aa6.29□□□□□ -1.4
HMGB1P6-201ENST00000569046 EIF1AXP47813 144 aaKnown RBP6.29□□□□□ -1.4
HMGB1P6-201ENST00000569046 MARSP56192 900 aaKnown RBP6.29□□□□□ -1.4
HMGB1P6-201ENST00000569046 NEUROD1Q13562 356 aa6.29□□□□□ -1.4
HMGB1P6-201ENST00000569046 ECM1Q16610 540 aa6.29□□□□□ -1.4
HMGB1P6-201ENST00000569046 TXNDC2Q86VQ3 553 aa6.29□□□□□ -1.4
HMGB1P6-201ENST00000569046 PNMA5Q96PV4 448 aa6.29□□□□□ -1.4
HMGB1P6-201ENST00000569046 IGFLR1Q9H665 355 aa6.29□□□□□ -1.4
HMGB1P6-201ENST00000569046 C11orf16Q9NQ32 467 aa6.29□□□□□ -1.4
HMGB1P6-201ENST00000569046 ZBTB42B2RXF5 422 aa6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 RARAP10276 462 aa6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 AMPD1P23109 780 aa6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 ARID4AP29374 1257 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 DGKGP49619 791 aa6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 FKBP4Q02790 459 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 TBC1D8BQ0IIM8 1120 aa6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 NOM1Q5C9Z4 860 aaKnown RBP6.28□□□□□ -1.4
HMGB1P6-201ENST00000569046 B4GALNT3Q6L9W6 998 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms