RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 FKBP4Q02790 459 aaKnown RBP eCLIP24.24■■□□□ 1.47
CPNE7-209ENST00000568977 AIMP1Q12904 312 aaKnown RBP24.24■■□□□ 1.47
CPNE7-209ENST00000568977 HDGFL1Q5TGJ6 251 aa24.24■■□□□ 1.47
CPNE7-209ENST00000568977 PPP1R42Q7Z4L9 355 aa24.24■■□□□ 1.47
CPNE7-209ENST00000568977 RPGRQ92834 1020 aaKnown RBP24.24■■□□□ 1.47
CPNE7-209ENST00000568977 CHPF2Q9P2E5 772 aa24.24■■□□□ 1.47
CPNE7-209ENST00000568977 LAMB2P55268 1798 aa24.22■■□□□ 1.47
CPNE7-209ENST00000568977 HSP90AB3PQ58FF7 597 aa24.22■■□□□ 1.47
CPNE7-209ENST00000568977 RTKN2Q8IZC4 609 aa24.22■■□□□ 1.47
CPNE7-209ENST00000568977 SMC1BQ8NDV3 1235 aa24.22■■□□□ 1.47
CPNE7-209ENST00000568977 MBIPQ9NS73 344 aa24.22■■□□□ 1.47
CPNE7-209ENST00000568977 HOXA10P31260 410 aaPredicted RBP24.21■■□□□ 1.47
CPNE7-209ENST00000568977 UTP14AQ9BVJ6 771 aaKnown RBP24.21■■□□□ 1.47
CPNE7-209ENST00000568977 ZNF277Q9NRM2 450 aaPredicted RBP24.21■■□□□ 1.47
CPNE7-209ENST00000568977 RNF123Q5XPI4 1314 aa24.2■■□□□ 1.46
CPNE7-209ENST00000568977 POTECB2RU33 542 aa24.2■■□□□ 1.46
CPNE7-209ENST00000568977 C3orf67Q6ZVT6 689 aa24.2■■□□□ 1.46
CPNE7-209ENST00000568977 DUSP27Q5VZP5 1158 aa24.19■■□□□ 1.46
CPNE7-209ENST00000568977 IFT57Q9NWB7 429 aa24.19■■□□□ 1.46
CPNE7-209ENST00000568977 DDNO94850 711 aaPredicted RBP24.18■■□□□ 1.46
CPNE7-209ENST00000568977 ZNF853P0CG23 659 aa24.18■■□□□ 1.46
CPNE7-209ENST00000568977 NLRP10Q86W26 655 aa24.18■■□□□ 1.46
CPNE7-209ENST00000568977 CRAMP1Q96RY5 1269 aa24.18■■□□□ 1.46
CPNE7-209ENST00000568977 DBF4Q9UBU7 674 aaPredicted RBP24.18■■□□□ 1.46
CPNE7-209ENST00000568977 IARSP41252 1262 aaKnown RBP24.17■■□□□ 1.46
CPNE7-209ENST00000568977 CALD1Q05682 793 aaKnown RBP24.17■■□□□ 1.46
CPNE7-209ENST00000568977 TCIRG1Q13488 830 aa24.17■■□□□ 1.46
CPNE7-209ENST00000568977 CCDC184Q52MB2 194 aa24.17■■□□□ 1.46
CPNE7-209ENST00000568977 CC2D2BQ6DHV5 1058 aa24.17■■□□□ 1.46
CPNE7-209ENST00000568977 RBM17Q96I25 401 aaKnown RBP24.17■■□□□ 1.46
CPNE7-209ENST00000568977 NLRP3Q96P20 1036 aa24.17■■□□□ 1.46
CPNE7-209ENST00000568977 GNAI1P63096 354 aa24.16■■□□□ 1.46
CPNE7-209ENST00000568977 SLC10A5Q5PT55 438 aa24.16■■□□□ 1.46
CPNE7-209ENST00000568977 SYNE4Q8N205 404 aa24.16■■□□□ 1.46
CPNE7-209ENST00000568977 PSMD1Q99460 953 aa24.16■■□□□ 1.46
CPNE7-209ENST00000568977 SCN4AP35499 1836 aa24.16■■□□□ 1.46
CPNE7-209ENST00000568977 ZNF541Q9H0D2 1346 aa24.15■■□□□ 1.46
CPNE7-209ENST00000568977 PPEF1O14829 653 aaPredicted RBP24.15■■□□□ 1.46
CPNE7-209ENST00000568977 SLC51AQ86UW1 340 aa24.15■■□□□ 1.46
CPNE7-209ENST00000568977 PLBD2Q8NHP8 589 aa24.15■■□□□ 1.46
CPNE7-209ENST00000568977 HTRA3P83110 453 aa24.14■■□□□ 1.45
CPNE7-209ENST00000568977 DDX60Q8IY21 1712 aaKnown RBP24.14■■□□□ 1.45
CPNE7-209ENST00000568977 DNAJC5GQ8N7S2 189 aa24.13■■□□□ 1.45
CPNE7-209ENST00000568977 HYPKQ9NX55 129 aa24.13■■□□□ 1.45
CPNE7-209ENST00000568977 TRMT112Q9UI30 125 aaKnown RBP24.13■■□□□ 1.45
CPNE7-209ENST00000568977 COL4A5P29400 1685 aa24.13■■□□□ 1.45
CPNE7-209ENST00000568977 ABCC4O15439 1325 aa24.12■■□□□ 1.45
CPNE7-209ENST00000568977 SH3TC1Q8TE82 1336 aa24.12■■□□□ 1.45
CPNE7-209ENST00000568977 HCLS1P14317 486 aaPredicted RBP24.12■■□□□ 1.45
CPNE7-209ENST00000568977 ANKRD13DQ6ZTN6 518 aa24.12■■□□□ 1.45
CPNE7-209ENST00000568977 L3MBTL3Q96JM7 780 aaPredicted RBP24.12■■□□□ 1.45
CPNE7-209ENST00000568977 TCERG1O14776 1098 aaKnown RBP24.11■■□□□ 1.45
CPNE7-209ENST00000568977 GRIPAP1Q4V328 841 aa24.11■■□□□ 1.45
CPNE7-209ENST00000568977 IQCA1LA6NCM1 817 aa24.1■■□□□ 1.45
CPNE7-209ENST00000568977 ELL2O00472 640 aaPredicted RBP24.1■■□□□ 1.45
CPNE7-209ENST00000568977 ZNF428Q96B54 188 aa24.1■■□□□ 1.45
CPNE7-209ENST00000568977 ZNF316A6NFI3 1004 aaPredicted RBP24.09■■□□□ 1.45
CPNE7-209ENST00000568977 FZD9O00144 591 aa24.09■■□□□ 1.45
CPNE7-209ENST00000568977 ISCA1Q9BUE6 129 aa24.09■■□□□ 1.45
CPNE7-209ENST00000568977 TAF1P21675 1872 aa24.09■■□□□ 1.45
CPNE7-209ENST00000568977 POTEIP0CG38 1075 aa24.08■■□□□ 1.45
CPNE7-209ENST00000568977 POTEJP0CG39 1038 aa24.08■■□□□ 1.45
CPNE7-209ENST00000568977 JDP2Q8WYK2 163 aa24.08■■□□□ 1.45
CPNE7-209ENST00000568977 ATP6V0A2Q9Y487 856 aa24.08■■□□□ 1.45
CPNE7-209ENST00000568977 ATP5J2-PTCD1G3V325 749 aa24.07■■□□□ 1.44
CPNE7-209ENST00000568977 C8orf58Q8NAV2 365 aa24.07■■□□□ 1.44
CPNE7-209ENST00000568977 KLRG1Q96E93 195 aa24.07■■□□□ 1.44
CPNE7-209ENST00000568977 TAF1DQ9H5J8 278 aaPredicted RBP24.07■■□□□ 1.44
CPNE7-209ENST00000568977 GOLGA2Q08379 1002 aa24.06■■□□□ 1.44
CPNE7-209ENST00000568977 CHADLQ6NUI6 762 aa24.06■■□□□ 1.44
CPNE7-209ENST00000568977 LARGE2Q8N3Y3 721 aa24.06■■□□□ 1.44
CPNE7-209ENST00000568977 TMX4Q9H1E5 349 aaPredicted RBP24.06■■□□□ 1.44
CPNE7-209ENST00000568977 MRS2Q9HD23 443 aa24.06■■□□□ 1.44
CPNE7-209ENST00000568977 LRRC37AA6NMS7 1700 aa24.06■■□□□ 1.44
CPNE7-209ENST00000568977 ANP32CO43423 234 aa24.05■■□□□ 1.44
CPNE7-209ENST00000568977 DDX46Q7L014 1031 aaKnown RBP24.05■■□□□ 1.44
CPNE7-209ENST00000568977 PHAXQ9H814 394 aaKnown RBP24.05■■□□□ 1.44
CPNE7-209ENST00000568977 ADAMTSL1Q8N6G6 1762 aa24.05■■□□□ 1.44
CPNE7-209ENST00000568977 BBOX1O75936 387 aa24.04■■□□□ 1.44
CPNE7-209ENST00000568977 GRAPQ13588 217 aa24.04■■□□□ 1.44
CPNE7-209ENST00000568977 CCDC27Q2M243 656 aa24.04■■□□□ 1.44
CPNE7-209ENST00000568977 RIC3Q7Z5B4 369 aa24.04■■□□□ 1.44
CPNE7-209ENST00000568977 GPC2Q8N158 579 aa24.04■■□□□ 1.44
CPNE7-209ENST00000568977 GRAPLQ8TC17 118 aaPredicted RBP24.04■■□□□ 1.44
CPNE7-209ENST00000568977 FAM89AQ96GI7 184 aa24.04■■□□□ 1.44
CPNE7-209ENST00000568977 HACL1Q9UJ83 578 aa24.04■■□□□ 1.44
CPNE7-209ENST00000568977 PPIP5K2O43314 1243 aa24.03■■□□□ 1.44
CPNE7-209ENST00000568977 EIF6P56537 245 aaKnown RBP24.03■■□□□ 1.44
CPNE7-209ENST00000568977 LDHDQ86WU2 507 aa24.03■■□□□ 1.44
CPNE7-209ENST00000568977 TSR2Q969E8 191 aaKnown RBP24.03■■□□□ 1.44
CPNE7-209ENST00000568977 WWC1Q8IX03 1113 aa24.02■■□□□ 1.44
CPNE7-209ENST00000568977 NIM1KQ8IY84 436 aa24.02■■□□□ 1.44
CPNE7-209ENST00000568977 LTBP1Q14766 1721 aa24.01■■□□□ 1.43
CPNE7-209ENST00000568977 DUOX1Q9NRD9 1551 aa24.01■■□□□ 1.43
CPNE7-209ENST00000568977 EPHX2P34913 555 aa24.01■■□□□ 1.43
CPNE7-209ENST00000568977 TRIM28Q13263 835 aaKnown RBP24.01■■□□□ 1.43
CPNE7-209ENST00000568977 AOC3Q16853 763 aa24.01■■□□□ 1.43
CPNE7-209ENST00000568977 RTL5Q5HYW3 569 aaPredicted RBP24.01■■□□□ 1.43
CPNE7-209ENST00000568977 CCDC30Q5VVM6 783 aa24.01■■□□□ 1.43
CPNE7-209ENST00000568977 SP8Q8IXZ3 490 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms