RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 C16orf71Q8IYS4 520 aaPredicted RBP18.73■□□□□ 0.59
CMTM3-215ENST00000568477 RPGRQ92834 1020 aaKnown RBP18.73■□□□□ 0.59
CMTM3-215ENST00000568477 UTP14AQ9BVJ6 771 aaKnown RBP18.73■□□□□ 0.59
CMTM3-215ENST00000568477 CCDC88AQ3V6T2 1871 aa18.73■□□□□ 0.59
CMTM3-215ENST00000568477 RNF123Q5XPI4 1314 aa18.73■□□□□ 0.59
CMTM3-215ENST00000568477 HYPKQ9NX55 129 aa18.72■□□□□ 0.59
CMTM3-215ENST00000568477 GLTPD2A6NH11 291 aa18.71■□□□□ 0.59
CMTM3-215ENST00000568477 HSPA6P17066 643 aa18.71■□□□□ 0.59
CMTM3-215ENST00000568477 TCIRG1Q13488 830 aa18.71■□□□□ 0.59
CMTM3-215ENST00000568477 RRAGCQ9HB90 399 aa18.71■□□□□ 0.59
CMTM3-215ENST00000568477 ANKRD36CQ5JPF3 1778 aa18.7■□□□□ 0.58
CMTM3-215ENST00000568477 HOXA10P31260 410 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-215ENST00000568477 NLRP10Q86W26 655 aa18.7■□□□□ 0.58
CMTM3-215ENST00000568477 RTKN2Q8IZC4 609 aa18.7■□□□□ 0.58
CMTM3-215ENST00000568477 PLBD2Q8NHP8 589 aa18.7■□□□□ 0.58
CMTM3-215ENST00000568477 DICER1Q9UPY3 1922 aaKnown RBP18.69■□□□□ 0.58
CMTM3-215ENST00000568477 ELL2O00472 640 aaPredicted RBP18.69■□□□□ 0.58
CMTM3-215ENST00000568477 FKBP4Q02790 459 aaKnown RBP eCLIP18.69■□□□□ 0.58
CMTM3-215ENST00000568477 CCDC27Q2M243 656 aa18.69■□□□□ 0.58
CMTM3-215ENST00000568477 SLC10A5Q5PT55 438 aa18.69■□□□□ 0.58
CMTM3-215ENST00000568477 DPY19L2Q6NUT2 758 aa18.69■□□□□ 0.58
CMTM3-215ENST00000568477 OLFM4Q6UX06 510 aa18.69■□□□□ 0.58
CMTM3-215ENST00000568477 ANKRD13DQ6ZTN6 518 aa18.69■□□□□ 0.58
CMTM3-215ENST00000568477 RBM46Q8TBY0 533 aaKnown RBP18.69■□□□□ 0.58
CMTM3-215ENST00000568477 RBM17Q96I25 401 aaKnown RBP18.69■□□□□ 0.58
CMTM3-215ENST00000568477 NLRP3Q96P20 1036 aa18.69■□□□□ 0.58
CMTM3-215ENST00000568477 C3orf67Q6ZVT6 689 aa18.68■□□□□ 0.58
CMTM3-215ENST00000568477 CRAMP1Q96RY5 1269 aa18.68■□□□□ 0.58
CMTM3-215ENST00000568477 CHMP4AQ9BY43 222 aa18.68■□□□□ 0.58
CMTM3-215ENST00000568477 CC2D2BQ6DHV5 1058 aa18.67■□□□□ 0.58
CMTM3-215ENST00000568477 WWC1Q8IX03 1113 aa18.67■□□□□ 0.58
CMTM3-215ENST00000568477 C8orf58Q8NAV2 365 aa18.67■□□□□ 0.58
CMTM3-215ENST00000568477 TRMT112Q9UI30 125 aaKnown RBP18.67■□□□□ 0.58
CMTM3-215ENST00000568477 SH3TC1Q8TE82 1336 aa18.67■□□□□ 0.58
CMTM3-215ENST00000568477 VEGFAP15692 232 aaPredicted RBP18.66■□□□□ 0.58
CMTM3-215ENST00000568477 ZNF277Q9NRM2 450 aaPredicted RBP18.66■□□□□ 0.58
CMTM3-215ENST00000568477 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-215ENST00000568477 HCLS1P14317 486 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-215ENST00000568477 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
CMTM3-215ENST00000568477 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
CMTM3-215ENST00000568477 FSTL1Q12841 308 aa18.64■□□□□ 0.57
CMTM3-215ENST00000568477 GRIPAP1Q4V328 841 aa18.64■□□□□ 0.57
CMTM3-215ENST00000568477 CCDC30Q5VVM6 783 aa18.64■□□□□ 0.57
CMTM3-215ENST00000568477 SYNE4Q8N205 404 aa18.64■□□□□ 0.57
CMTM3-215ENST00000568477 TSR2Q969E8 191 aaKnown RBP18.64■□□□□ 0.57
CMTM3-215ENST00000568477 PSMD1Q99460 953 aa18.64■□□□□ 0.57
CMTM3-215ENST00000568477 ISCA1Q9BUE6 129 aa18.64■□□□□ 0.57
CMTM3-215ENST00000568477 IL16Q14005 1332 aa18.64■□□□□ 0.57
CMTM3-215ENST00000568477 SNED1Q8TER0 1413 aa18.64■□□□□ 0.57
CMTM3-215ENST00000568477 ATP5J2-PTCD1G3V325 749 aa18.63■□□□□ 0.57
CMTM3-215ENST00000568477 IARSP41252 1262 aaKnown RBP18.63■□□□□ 0.57
CMTM3-215ENST00000568477 RIC3Q7Z5B4 369 aa18.63■□□□□ 0.57
CMTM3-215ENST00000568477 PHAXQ9H814 394 aaKnown RBP18.63■□□□□ 0.57
CMTM3-215ENST00000568477 WDR90Q96KV7 1748 aa18.63■□□□□ 0.57
CMTM3-215ENST00000568477 CEP350Q5VT06 3117 aa18.63■□□□□ 0.57
CMTM3-215ENST00000568477 TCERG1O14776 1098 aaKnown RBP18.62■□□□□ 0.57
CMTM3-215ENST00000568477 APLP1P51693 650 aa18.62■□□□□ 0.57
CMTM3-215ENST00000568477 TSPYL6Q8N831 410 aa18.62■□□□□ 0.57
CMTM3-215ENST00000568477 SMC1BQ8NDV3 1235 aa18.62■□□□□ 0.57
CMTM3-215ENST00000568477 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
CMTM3-215ENST00000568477 TMX4Q9H1E5 349 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-215ENST00000568477 ABCC4O15439 1325 aa18.62■□□□□ 0.57
CMTM3-215ENST00000568477 DDNO94850 711 aaPredicted RBP18.61■□□□□ 0.57
CMTM3-215ENST00000568477 TRIM28Q13263 835 aaKnown RBP18.61■□□□□ 0.57
CMTM3-215ENST00000568477 DDX46Q7L014 1031 aaKnown RBP18.61■□□□□ 0.57
CMTM3-215ENST00000568477 POTECB2RU33 542 aa18.6■□□□□ 0.57
CMTM3-215ENST00000568477 DDX58O95786 925 aaKnown RBP18.6■□□□□ 0.57
CMTM3-215ENST00000568477 ATP6V0A2Q9Y487 856 aa18.6■□□□□ 0.57
CMTM3-215ENST00000568477 BBOX1O75936 387 aa18.59■□□□□ 0.57
CMTM3-215ENST00000568477 TWISTNBQ3B726 338 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-215ENST00000568477 JDP2Q8WYK2 163 aa18.59■□□□□ 0.57
CMTM3-215ENST00000568477 FAM89AQ96GI7 184 aa18.59■□□□□ 0.57
CMTM3-215ENST00000568477 STK31Q9BXU1 1019 aa18.59■□□□□ 0.57
CMTM3-215ENST00000568477 SALL2Q9Y467 1007 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-215ENST00000568477 LAMB2P55268 1798 aa18.59■□□□□ 0.57
CMTM3-215ENST00000568477 ZNF541Q9H0D2 1346 aa18.58■□□□□ 0.57
CMTM3-215ENST00000568477 SLC51AQ86UW1 340 aa18.58■□□□□ 0.56
CMTM3-215ENST00000568477 WDR63Q8IWG1 891 aa18.58■□□□□ 0.56
CMTM3-215ENST00000568477 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.56
CMTM3-215ENST00000568477 MYD88Q99836 296 aa18.58■□□□□ 0.56
CMTM3-215ENST00000568477 IQCA1LA6NCM1 817 aa18.57■□□□□ 0.56
CMTM3-215ENST00000568477 GRAPQ13588 217 aa18.57■□□□□ 0.56
CMTM3-215ENST00000568477 LARGE2Q8N3Y3 721 aa18.57■□□□□ 0.56
CMTM3-215ENST00000568477 GRAPLQ8TC17 118 aaPredicted RBP18.57■□□□□ 0.56
CMTM3-215ENST00000568477 L3MBTL3Q96JM7 780 aaPredicted RBP18.57■□□□□ 0.56
CMTM3-215ENST00000568477 FANCIQ9NVI1 1328 aa18.56■□□□□ 0.56
CMTM3-215ENST00000568477 FZD9O00144 591 aa18.56■□□□□ 0.56
CMTM3-215ENST00000568477 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-215ENST00000568477 RTL5Q5HYW3 569 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-215ENST00000568477 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
CMTM3-215ENST00000568477 SP8Q8IXZ3 490 aa18.56■□□□□ 0.56
CMTM3-215ENST00000568477 DDX60Q8IY21 1712 aaKnown RBP18.56■□□□□ 0.56
CMTM3-215ENST00000568477 HSP90B1P14625 803 aaKnown RBP18.55■□□□□ 0.56
CMTM3-215ENST00000568477 SF3B3Q15393 1217 aaKnown RBP18.55■□□□□ 0.56
CMTM3-215ENST00000568477 TMC4Q7Z404 712 aa18.55■□□□□ 0.56
CMTM3-215ENST00000568477 ZBTB38Q8NAP3 1195 aaPredicted RBP18.55■□□□□ 0.56
CMTM3-215ENST00000568477 CCDC191Q8NCU4 936 aa18.55■□□□□ 0.56
CMTM3-215ENST00000568477 SUPT20HQ8NEM7 779 aa18.55■□□□□ 0.56
CMTM3-215ENST00000568477 METTL22Q9BUU2 404 aaPredicted RBP18.55■□□□□ 0.56
CMTM3-215ENST00000568477 PPIP5K2O43314 1243 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms