RNA–Protein interactions for RNA: ENST00000568331.5

SNAP23-216, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-216ENST00000568331 PRPF40BQ6NWY9 871 aaKnown RBP27.12■■□□□ 1.93
SNAP23-216ENST00000568331 RIC3Q7Z5B4 369 aa27.12■■□□□ 1.93
SNAP23-216ENST00000568331 NLRP10Q86W26 655 aa27.12■■□□□ 1.93
SNAP23-216ENST00000568331 PHAXQ9H814 394 aaKnown RBP27.12■■□□□ 1.93
SNAP23-216ENST00000568331 RNF123Q5XPI4 1314 aa27.12■■□□□ 1.93
SNAP23-216ENST00000568331 RIC1Q4ADV7 1423 aa27.11■■□□□ 1.93
SNAP23-216ENST00000568331 ALDH1B1P30837 517 aa27.11■■□□□ 1.93
SNAP23-216ENST00000568331 MYH16Q9H6N6 1097 aa27.11■■□□□ 1.93
SNAP23-216ENST00000568331 DDX58O95786 925 aaKnown RBP27.1■■□□□ 1.93
SNAP23-216ENST00000568331 SOGA3Q5TF21 947 aa27.1■■□□□ 1.93
SNAP23-216ENST00000568331 RPGRQ92834 1020 aaKnown RBP27.1■■□□□ 1.93
SNAP23-216ENST00000568331 CCDC88AQ3V6T2 1871 aa27.1■■□□□ 1.93
SNAP23-216ENST00000568331 NLRP3Q96P20 1036 aa27.09■■□□□ 1.93
SNAP23-216ENST00000568331 RNF181Q9P0P0 153 aa27.09■■□□□ 1.93
SNAP23-216ENST00000568331 TRMT112Q9UI30 125 aaKnown RBP27.09■■□□□ 1.93
SNAP23-216ENST00000568331 RASSF7Q02833 373 aa27.08■■□□□ 1.93
SNAP23-216ENST00000568331 ZNF526Q8TF50 670 aaPredicted RBP27.08■■□□□ 1.93
SNAP23-216ENST00000568331 FER1L6Q2WGJ9 1857 aa27.07■■□□□ 1.92
SNAP23-216ENST00000568331 CRY2Q49AN0 593 aa27.07■■□□□ 1.92
SNAP23-216ENST00000568331 DIEXFQ68CQ4 756 aaKnown RBP27.07■■□□□ 1.92
SNAP23-216ENST00000568331 GPBP1L1Q9HC44 474 aaPredicted RBP27.07■■□□□ 1.92
SNAP23-216ENST00000568331 CACNA1FO60840 1977 aa27.06■■□□□ 1.92
SNAP23-216ENST00000568331 ATP5J2-PTCD1G3V325 749 aa27.06■■□□□ 1.92
SNAP23-216ENST00000568331 TCERG1O14776 1098 aaKnown RBP27.06■■□□□ 1.92
SNAP23-216ENST00000568331 LMNB1P20700 586 aa27.06■■□□□ 1.92
SNAP23-216ENST00000568331 EXOSC9Q06265 439 aaKnown RBP27.06■■□□□ 1.92
SNAP23-216ENST00000568331 SLC10A5Q5PT55 438 aa27.06■■□□□ 1.92
SNAP23-216ENST00000568331 ISCA1Q9BUE6 129 aa27.06■■□□□ 1.92
SNAP23-216ENST00000568331 SH3TC1Q8TE82 1336 aa27.06■■□□□ 1.92
SNAP23-216ENST00000568331 RBM17Q96I25 401 aaKnown RBP27.05■■□□□ 1.92
SNAP23-216ENST00000568331 SPINK5Q9NQ38 1064 aaPredicted RBP27.04■■□□□ 1.92
SNAP23-216ENST00000568331 NFKBIEO00221 500 aa27.03■■□□□ 1.92
SNAP23-216ENST00000568331 SLC4A2P04920 1241 aa27.03■■□□□ 1.92
SNAP23-216ENST00000568331 LAMB2P55268 1798 aa27.03■■□□□ 1.92
SNAP23-216ENST00000568331 HOXA10P31260 410 aaPredicted RBP27.02■■□□□ 1.92
SNAP23-216ENST00000568331 TRIM28Q13263 835 aaKnown RBP27.02■■□□□ 1.92
SNAP23-216ENST00000568331 CCDC93Q567U6 631 aa27.02■■□□□ 1.92
SNAP23-216ENST00000568331 ZNF428Q96B54 188 aa27.02■■□□□ 1.92
SNAP23-216ENST00000568331 MYD88Q99836 296 aa27.02■■□□□ 1.92
SNAP23-216ENST00000568331 ZNF521Q96K83 1311 aa27.01■■□□□ 1.91
SNAP23-216ENST00000568331 VAMP4O75379 141 aa27.01■■□□□ 1.91
SNAP23-216ENST00000568331 HCLS1P14317 486 aaPredicted RBP27.01■■□□□ 1.91
SNAP23-216ENST00000568331 TAOK3Q9H2K8 898 aa27.01■■□□□ 1.91
SNAP23-216ENST00000568331 SYNE4Q8N205 404 aa27■■□□□ 1.91
SNAP23-216ENST00000568331 C7orf43Q8WVR3 580 aa27■■□□□ 1.91
SNAP23-216ENST00000568331 CRAMP1Q96RY5 1269 aa27■■□□□ 1.91
SNAP23-216ENST00000568331 DICER1Q9UPY3 1922 aaKnown RBP27■■□□□ 1.91
SNAP23-216ENST00000568331 TIAM2Q8IVF5 1701 aa26.99■■□□□ 1.91
SNAP23-216ENST00000568331 LTBP3Q9NS15 1303 aa26.99■■□□□ 1.91
SNAP23-216ENST00000568331 KSR2Q6VAB6 950 aa26.99■■□□□ 1.91
SNAP23-216ENST00000568331 C3orf67Q6ZVT6 689 aa26.99■■□□□ 1.91
SNAP23-216ENST00000568331 FAM89AQ96GI7 184 aa26.99■■□□□ 1.91
SNAP23-216ENST00000568331 METTL22Q9BUU2 404 aaPredicted RBP26.99■■□□□ 1.91
SNAP23-216ENST00000568331 MAP3K2Q9Y2U5 619 aa26.99■■□□□ 1.91
SNAP23-216ENST00000568331 DDX60Q8IY21 1712 aaKnown RBP26.99■■□□□ 1.91
SNAP23-216ENST00000568331 PI4KAP2A4QPH2 592 aa26.98■■□□□ 1.91
SNAP23-216ENST00000568331 RTKN2Q8IZC4 609 aa26.98■■□□□ 1.91
SNAP23-216ENST00000568331 PI4KAP1Q8N8J0 262 aa26.98■■□□□ 1.91
SNAP23-216ENST00000568331 ZC3H4Q9UPT8 1303 aaKnown RBP26.97■■□□□ 1.91
SNAP23-216ENST00000568331 NEXNQ0ZGT2 675 aa26.97■■□□□ 1.91
SNAP23-216ENST00000568331 G2E3Q7L622 706 aa26.97■■□□□ 1.91
SNAP23-216ENST00000568331 CCDC191Q8NCU4 936 aa26.97■■□□□ 1.91
SNAP23-216ENST00000568331 TMX4Q9H1E5 349 aaPredicted RBP26.97■■□□□ 1.91
SNAP23-216ENST00000568331 PRELPP51888 382 aa26.96■■□□□ 1.91
SNAP23-216ENST00000568331 RTL5Q5HYW3 569 aaPredicted RBP26.96■■□□□ 1.91
SNAP23-216ENST00000568331 CC2D2BQ6DHV5 1058 aa26.96■■□□□ 1.91
SNAP23-216ENST00000568331 CWC25Q9NXE8 425 aaPredicted RBP26.96■■□□□ 1.91
SNAP23-216ENST00000568331 KDM2BQ8NHM5 1336 aa26.95■■□□□ 1.91
SNAP23-216ENST00000568331 E9PSI1 815 aa26.95■■□□□ 1.9
SNAP23-216ENST00000568331 PPEF1O14829 653 aaPredicted RBP26.95■■□□□ 1.9
SNAP23-216ENST00000568331 HSP90B1P14625 803 aaKnown RBP26.95■■□□□ 1.9
SNAP23-216ENST00000568331 FLIIQ13045 1269 aa26.95■■□□□ 1.9
SNAP23-216ENST00000568331 DDX46Q7L014 1031 aaKnown RBP26.95■■□□□ 1.9
SNAP23-216ENST00000568331 FKBP4Q02790 459 aaKnown RBP eCLIP26.94■■□□□ 1.9
SNAP23-216ENST00000568331 FKBP5Q13451 457 aaPredicted RBP26.94■■□□□ 1.9
SNAP23-216ENST00000568331 OLFM4Q6UX06 510 aa26.94■■□□□ 1.9
SNAP23-216ENST00000568331 MIER1Q8N108 512 aa26.94■■□□□ 1.9
SNAP23-216ENST00000568331 ZBTB38Q8NAP3 1195 aaPredicted RBP26.94■■□□□ 1.9
SNAP23-216ENST00000568331 IRS4O14654 1257 aaPredicted RBP26.93■■□□□ 1.9
SNAP23-216ENST00000568331 ABCC4O15439 1325 aa26.92■■□□□ 1.9
SNAP23-216ENST00000568331 GRIPAP1Q4V328 841 aa26.92■■□□□ 1.9
SNAP23-216ENST00000568331 BBOX1O75936 387 aa26.9■■□□□ 1.9
SNAP23-216ENST00000568331 PCCAP05165 728 aaPredicted RBP26.9■■□□□ 1.9
SNAP23-216ENST00000568331 C1QTNF8P60827 252 aa26.89■■□□□ 1.9
SNAP23-216ENST00000568331 SLFN5Q08AF3 891 aa26.89■■□□□ 1.9
SNAP23-216ENST00000568331 TAF1P21675 1872 aa26.89■■□□□ 1.89
SNAP23-216ENST00000568331 IGKV5-2P06315 115 aa26.88■■□□□ 1.89
SNAP23-216ENST00000568331 GRAPQ13588 217 aa26.88■■□□□ 1.89
SNAP23-216ENST00000568331 SF3B3Q15393 1217 aaKnown RBP26.88■■□□□ 1.89
SNAP23-216ENST00000568331 DPY19L2Q6NUT2 758 aa26.88■■□□□ 1.89
SNAP23-216ENST00000568331 GRAPLQ8TC17 118 aaPredicted RBP26.88■■□□□ 1.89
SNAP23-216ENST00000568331 ZNF277Q9NRM2 450 aaPredicted RBP26.88■■□□□ 1.89
SNAP23-216ENST00000568331 ATP6V0A2Q9Y487 856 aa26.88■■□□□ 1.89
SNAP23-216ENST00000568331 GLTPD2A6NH11 291 aa26.87■■□□□ 1.89
SNAP23-216ENST00000568331 DNAAF4Q8WXU2 420 aa26.87■■□□□ 1.89
SNAP23-216ENST00000568331 PSMD1Q99460 953 aa26.87■■□□□ 1.89
SNAP23-216ENST00000568331 NMRK2Q9NPI5 230 aa26.87■■□□□ 1.89
SNAP23-216ENST00000568331 JARID2Q92833 1246 aaPredicted RBP26.86■■□□□ 1.89
SNAP23-216ENST00000568331 NEURL1BA8MQ27 555 aa26.85■■□□□ 1.89
SNAP23-216ENST00000568331 KIF3CO14782 793 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms