RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 LOC102724428A0A0B4J2F2 783 aa18.2■□□□□ 0.5
COMMD4-221ENST00000567935 SIK1P57059 783 aa18.2■□□□□ 0.5
COMMD4-221ENST00000567935 CHD1LQ86WJ1 897 aa18.2■□□□□ 0.5
COMMD4-221ENST00000567935 SKAP1Q86WV1 359 aa18.2■□□□□ 0.5
COMMD4-221ENST00000567935 PIGBQ92521 554 aa18.2■□□□□ 0.5
COMMD4-221ENST00000567935 ZNF496Q96IT1 587 aaPredicted RBP18.2■□□□□ 0.5
COMMD4-221ENST00000567935 DCTPP1Q9H773 170 aa18.2■□□□□ 0.5
COMMD4-221ENST00000567935 PHAXQ9H814 394 aaKnown RBP18.2■□□□□ 0.5
COMMD4-221ENST00000567935 SBF1O95248 1867 aa18.2■□□□□ 0.5
COMMD4-221ENST00000567935 ALDH1L1O75891 902 aa18.19■□□□□ 0.5
COMMD4-221ENST00000567935 ANP32AP39687 249 aaKnown RBP18.19■□□□□ 0.5
COMMD4-221ENST00000567935 SLC39A6Q13433 755 aa18.19■□□□□ 0.5
COMMD4-221ENST00000567935 KSR2Q6VAB6 950 aa18.19■□□□□ 0.5
COMMD4-221ENST00000567935 PIM2Q9P1W9 311 aa18.19■□□□□ 0.5
COMMD4-221ENST00000567935 VEGFAP15692 232 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-221ENST00000567935 C8orf34Q49A92 452 aa18.18■□□□□ 0.5
COMMD4-221ENST00000567935 ZBTB47Q9UFB7 747 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-221ENST00000567935 PI4KAP2A4QPH2 592 aa18.17■□□□□ 0.5
COMMD4-221ENST00000567935 UBTFL1P0CB47 393 aaPredicted RBP18.17■□□□□ 0.5
COMMD4-221ENST00000567935 RASSF7Q02833 373 aa18.17■□□□□ 0.5
COMMD4-221ENST00000567935 DALRD3Q5D0E6 543 aaKnown RBP18.17■□□□□ 0.5
COMMD4-221ENST00000567935 NLGN1Q8N2Q7 840 aa18.17■□□□□ 0.5
COMMD4-221ENST00000567935 PI4KAP1Q8N8J0 262 aa18.17■□□□□ 0.5
COMMD4-221ENST00000567935 ABHD8Q96I13 439 aa18.17■□□□□ 0.5
COMMD4-221ENST00000567935 BEND3Q5T5X7 828 aa18.16■□□□□ 0.5
COMMD4-221ENST00000567935 GLTPD2A6NH11 291 aa18.15■□□□□ 0.5
COMMD4-221ENST00000567935 CTCFP49711 727 aaPredicted RBP18.15■□□□□ 0.5
COMMD4-221ENST00000567935 PDIA6Q15084 440 aa18.15■□□□□ 0.5
COMMD4-221ENST00000567935 ANKRD45Q5TZF3 282 aa18.15■□□□□ 0.5
COMMD4-221ENST00000567935 USP44Q9H0E7 712 aa18.15■□□□□ 0.5
COMMD4-221ENST00000567935 CREBZFQ9NS37 354 aa18.15■□□□□ 0.5
COMMD4-221ENST00000567935 GYS1P13807 737 aa18.14■□□□□ 0.49
COMMD4-221ENST00000567935 ATP6V1AP38606 617 aa18.14■□□□□ 0.49
COMMD4-221ENST00000567935 LINS1Q8NG48 757 aa18.14■□□□□ 0.49
COMMD4-221ENST00000567935 TMOD3Q9NYL9 352 aa18.14■□□□□ 0.49
COMMD4-221ENST00000567935 PARP3Q9Y6F1 533 aa18.14■□□□□ 0.49
COMMD4-221ENST00000567935 ATP8B2P98198 1209 aa18.13■□□□□ 0.49
COMMD4-221ENST00000567935 MLLT1Q03111 559 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-221ENST00000567935 TEX13AQ9BXU3 409 aaPredicted RBP18.13■□□□□ 0.49
COMMD4-221ENST00000567935 LNPKQ9C0E8 428 aa18.13■□□□□ 0.49
COMMD4-221ENST00000567935 MAP3K2Q9Y2U5 619 aa18.13■□□□□ 0.49
COMMD4-221ENST00000567935 ZC3H4Q9UPT8 1303 aaKnown RBP18.13■□□□□ 0.49
COMMD4-221ENST00000567935 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
COMMD4-221ENST00000567935 POTECB2RU33 542 aa18.12■□□□□ 0.49
COMMD4-221ENST00000567935 CHRNA5P30532 468 aa18.12■□□□□ 0.49
COMMD4-221ENST00000567935 LBX1P52954 281 aa18.12■□□□□ 0.49
COMMD4-221ENST00000567935 PROSER3Q2NL68 480 aa18.12■□□□□ 0.49
COMMD4-221ENST00000567935 TRAPPC3LQ5T215 181 aa18.12■□□□□ 0.49
COMMD4-221ENST00000567935 VSIG10Q8N0Z9 540 aa18.12■□□□□ 0.49
COMMD4-221ENST00000567935 ASAP1Q9ULH1 1129 aa18.12■□□□□ 0.49
COMMD4-221ENST00000567935 CNTNAP1P78357 1384 aa18.12■□□□□ 0.49
COMMD4-221ENST00000567935 EIF5BO60841 1220 aaKnown RBP18.11■□□□□ 0.49
COMMD4-221ENST00000567935 ANXA1P04083 346 aa18.11■□□□□ 0.49
COMMD4-221ENST00000567935 NEXNQ0ZGT2 675 aa18.11■□□□□ 0.49
COMMD4-221ENST00000567935 ARHGEF1Q92888 912 aaKnown RBP18.11■□□□□ 0.49
COMMD4-221ENST00000567935 AIDAQ96BJ3 306 aa18.11■□□□□ 0.49
COMMD4-221ENST00000567935 RTCBQ9Y3I0 505 aaKnown RBP18.11■□□□□ 0.49
COMMD4-221ENST00000567935 BMP2KLQ5H9B9 411 aa18.1■□□□□ 0.49
COMMD4-221ENST00000567935 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
COMMD4-221ENST00000567935 UTYO14607 1347 aa18.09■□□□□ 0.49
COMMD4-221ENST00000567935 LRP10Q7Z4F1 713 aa18.09■□□□□ 0.49
COMMD4-221ENST00000567935 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
COMMD4-221ENST00000567935 LRRFIP2Q9Y608 721 aaKnown RBP18.09■□□□□ 0.49
COMMD4-221ENST00000567935 TIAM2Q8IVF5 1701 aa18.09■□□□□ 0.49
COMMD4-221ENST00000567935 MTX1Q13505 466 aa18.08■□□□□ 0.48
COMMD4-221ENST00000567935 SSH3Q8TE77 659 aa18.08■□□□□ 0.48
COMMD4-221ENST00000567935 XAGE3Q8WTP9 111 aa18.08■□□□□ 0.48
COMMD4-221ENST00000567935 METTL22Q9BUU2 404 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-221ENST00000567935 UPF2Q9HAU5 1272 aaKnown RBP18.08■□□□□ 0.48
COMMD4-221ENST00000567935 LMNB1P20700 586 aa18.07■□□□□ 0.48
COMMD4-221ENST00000567935 RGS19P49795 217 aa18.07■□□□□ 0.48
COMMD4-221ENST00000567935 HSP90AB4PQ58FF6 505 aa18.07■□□□□ 0.48
COMMD4-221ENST00000567935 ANKRD13DQ6ZTN6 518 aa18.07■□□□□ 0.48
COMMD4-221ENST00000567935 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
COMMD4-221ENST00000567935 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
COMMD4-221ENST00000567935 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-221ENST00000567935 RAB11FIP3O75154 756 aa18.06■□□□□ 0.48
COMMD4-221ENST00000567935 POTEIP0CG38 1075 aa18.06■□□□□ 0.48
COMMD4-221ENST00000567935 POTEJP0CG39 1038 aa18.06■□□□□ 0.48
COMMD4-221ENST00000567935 MYL6BP14649 208 aa18.06■□□□□ 0.48
COMMD4-221ENST00000567935 DDR1Q08345 913 aa18.06■□□□□ 0.48
COMMD4-221ENST00000567935 POLA2Q14181 598 aa18.06■□□□□ 0.48
COMMD4-221ENST00000567935 PLBD2Q8NHP8 589 aa18.06■□□□□ 0.48
COMMD4-221ENST00000567935 WBP1LQ9NX94 342 aa18.06■□□□□ 0.48
COMMD4-221ENST00000567935 CCDC85CA6NKD9 419 aa18.05■□□□□ 0.48
COMMD4-221ENST00000567935 GRM8O00222 908 aa18.05■□□□□ 0.48
COMMD4-221ENST00000567935 HSPA8P11142 646 aaKnown RBP18.05■□□□□ 0.48
COMMD4-221ENST00000567935 ADRA2BP18089 450 aa18.05■□□□□ 0.48
COMMD4-221ENST00000567935 RFC4P35249 363 aa18.05■□□□□ 0.48
COMMD4-221ENST00000567935 VEGFBP49765 207 aa18.05■□□□□ 0.48
COMMD4-221ENST00000567935 AIMP1Q12904 312 aaKnown RBP18.05■□□□□ 0.48
COMMD4-221ENST00000567935 CHADLQ6NUI6 762 aa18.05■□□□□ 0.48
COMMD4-221ENST00000567935 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
COMMD4-221ENST00000567935 ATG3Q9NT62 314 aa18.05■□□□□ 0.48
COMMD4-221ENST00000567935 COL15A1P39059 1388 aa18.04■□□□□ 0.48
COMMD4-221ENST00000567935 IPO9Q96P70 1041 aaKnown RBP18.04■□□□□ 0.48
COMMD4-221ENST00000567935 ARFGEF2Q9Y6D5 1785 aa18.04■□□□□ 0.48
COMMD4-221ENST00000567935 NEURL1BA8MQ27 555 aa18.03■□□□□ 0.48
COMMD4-221ENST00000567935 STARD3NLO95772 234 aa18.03■□□□□ 0.48
COMMD4-221ENST00000567935 NBPF7P0C2Y1 421 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms