RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
CDH13-210ENST00000567445 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
CDH13-210ENST00000567445 SCN7AQ01118 1682 aa12.24□□□□□ -0.45
CDH13-210ENST00000567445 DLEC1Q9Y238 1755 aa12.24□□□□□ -0.45
CDH13-210ENST00000567445 SBF1O95248 1867 aa12.23□□□□□ -0.45
CDH13-210ENST00000567445 CARMIL3Q8ND23 1372 aa12.23□□□□□ -0.45
CDH13-210ENST00000567445 STK25O00506 426 aa12.23□□□□□ -0.45
CDH13-210ENST00000567445 MCM10Q7L590 875 aa12.23□□□□□ -0.45
CDH13-210ENST00000567445 TTLL6Q8N841 843 aa12.23□□□□□ -0.45
CDH13-210ENST00000567445 KDM2BQ8NHM5 1336 aa12.23□□□□□ -0.45
CDH13-210ENST00000567445 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
CDH13-210ENST00000567445 CAMTA2O94983 1202 aa12.22□□□□□ -0.45
CDH13-210ENST00000567445 HOMEZQ8IX15 550 aa12.22□□□□□ -0.45
CDH13-210ENST00000567445 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
CDH13-210ENST00000567445 TMEM121BQ9BXQ6 578 aaPredicted RBP12.22□□□□□ -0.45
CDH13-210ENST00000567445 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.45
CDH13-210ENST00000567445 PDE6BP35913 854 aa12.21□□□□□ -0.45
CDH13-210ENST00000567445 PRR5LQ6MZQ0 368 aa12.21□□□□□ -0.45
CDH13-210ENST00000567445 SETDB2Q96T68 719 aa12.21□□□□□ -0.45
CDH13-210ENST00000567445 PDZRN3Q9UPQ7 1066 aa12.21□□□□□ -0.45
CDH13-210ENST00000567445 USP16Q9Y5T5 823 aa12.21□□□□□ -0.45
CDH13-210ENST00000567445 ZC3H4Q9UPT8 1303 aaKnown RBP12.21□□□□□ -0.45
CDH13-210ENST00000567445 LMNB1P20700 586 aa12.21□□□□□ -0.46
CDH13-210ENST00000567445 APLP1P51693 650 aa12.21□□□□□ -0.46
CDH13-210ENST00000567445 RASSF7Q02833 373 aa12.21□□□□□ -0.46
CDH13-210ENST00000567445 DZIP3Q86Y13 1208 aaKnown RBP12.21□□□□□ -0.46
CDH13-210ENST00000567445 C16orf71Q8IYS4 520 aaPredicted RBP12.21□□□□□ -0.46
CDH13-210ENST00000567445 RBM46Q8TBY0 533 aaKnown RBP12.21□□□□□ -0.46
CDH13-210ENST00000567445 ANKRD31Q8N7Z5 1873 aa12.2□□□□□ -0.46
CDH13-210ENST00000567445 PRAMEF22A3QJZ6 481 aa12.2□□□□□ -0.46
CDH13-210ENST00000567445 DCTN1Q14203 1278 aa12.2□□□□□ -0.46
CDH13-210ENST00000567445 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
CDH13-210ENST00000567445 ZNF622Q969S3 477 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDH13-210ENST00000567445 MS4A4AQ96JQ5 239 aa12.2□□□□□ -0.46
CDH13-210ENST00000567445 BCORQ6W2J9 1755 aa12.19□□□□□ -0.46
CDH13-210ENST00000567445 NPHP1O15259 732 aa12.19□□□□□ -0.46
CDH13-210ENST00000567445 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
CDH13-210ENST00000567445 TAF7Q15545 349 aaPredicted RBP12.19□□□□□ -0.46
CDH13-210ENST00000567445 CLEC4GQ6UXB4 293 aa12.19□□□□□ -0.46
CDH13-210ENST00000567445 NEFMP07197 916 aa12.18□□□□□ -0.46
CDH13-210ENST00000567445 PRELPP51888 382 aa12.18□□□□□ -0.46
CDH13-210ENST00000567445 ST5P78524 1137 aa12.18□□□□□ -0.46
CDH13-210ENST00000567445 CCDC24Q8N4L8 307 aa12.18□□□□□ -0.46
CDH13-210ENST00000567445 RRAGCQ9HB90 399 aa12.18□□□□□ -0.46
CDH13-210ENST00000567445 ZNF652Q9Y2D9 606 aa12.18□□□□□ -0.46
CDH13-210ENST00000567445 TNRC6CQ9HCJ0 1690 aaKnown RBP12.18□□□□□ -0.46
CDH13-210ENST00000567445 COL11A2P13942 1736 aaPredicted RBP12.17□□□□□ -0.46
CDH13-210ENST00000567445 NBPF26B4DH59 902 aa12.17□□□□□ -0.46
CDH13-210ENST00000567445 NFKBIEO00221 500 aa12.17□□□□□ -0.46
CDH13-210ENST00000567445 FSTL1Q12841 308 aa12.17□□□□□ -0.46
CDH13-210ENST00000567445 NBPF10Q6P3W6 841 aaKnown RBP12.17□□□□□ -0.46
CDH13-210ENST00000567445 NBPF15Q8N660 670 aa12.17□□□□□ -0.46
CDH13-210ENST00000567445 GLTPD2A6NH11 291 aa12.16□□□□□ -0.46
CDH13-210ENST00000567445 C21orf2O43822 256 aa12.16□□□□□ -0.46
CDH13-210ENST00000567445 SRGNP10124 158 aa12.16□□□□□ -0.46
CDH13-210ENST00000567445 STYK1Q6J9G0 422 aa12.16□□□□□ -0.46
CDH13-210ENST00000567445 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
CDH13-210ENST00000567445 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
CDH13-210ENST00000567445 CNKSR1Q969H4 720 aa12.16□□□□□ -0.46
CDH13-210ENST00000567445 CCDC88AQ3V6T2 1871 aa12.16□□□□□ -0.46
CDH13-210ENST00000567445 PNISRQ8TF01 805 aaKnown RBP12.15□□□□□ -0.46
CDH13-210ENST00000567445 MASTLQ96GX5 879 aa12.15□□□□□ -0.46
CDH13-210ENST00000567445 PLEKHF1Q96S99 279 aa12.15□□□□□ -0.46
CDH13-210ENST00000567445 MIS18AQ9NYP9 233 aa12.15□□□□□ -0.46
CDH13-210ENST00000567445 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
CDH13-210ENST00000567445 TIAM2Q8IVF5 1701 aa12.15□□□□□ -0.47
CDH13-210ENST00000567445 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 TMEM132AQ24JP5 1023 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 DNAJC5GQ8N7S2 189 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 PNNQ9H307 717 aaKnown RBP12.14□□□□□ -0.47
CDH13-210ENST00000567445 SLX4Q8IY92 1834 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 FER1L6Q2WGJ9 1857 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
CDH13-210ENST00000567445 SOGA3Q5TF21 947 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 PRPF40BQ6NWY9 871 aaKnown RBP12.14□□□□□ -0.47
CDH13-210ENST00000567445 TPTE2Q6XPS3 522 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 FBXO22Q8NEZ5 403 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 NIP7Q9Y221 180 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDH13-210ENST00000567445 LTBP3Q9NS15 1303 aa12.14□□□□□ -0.47
CDH13-210ENST00000567445 ERFEQ4G0M1 354 aa12.13□□□□□ -0.47
CDH13-210ENST00000567445 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
CDH13-210ENST00000567445 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
CDH13-210ENST00000567445 MAPK8IP3Q9UPT6 1336 aa12.13□□□□□ -0.47
CDH13-210ENST00000567445 WDR90Q96KV7 1748 aa12.13□□□□□ -0.47
CDH13-210ENST00000567445 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
CDH13-210ENST00000567445 KDM3BQ7LBC6 1761 aa12.13□□□□□ -0.47
CDH13-210ENST00000567445 DICER1Q9UPY3 1922 aaKnown RBP12.12□□□□□ -0.47
CDH13-210ENST00000567445 ARFGEF2Q9Y6D5 1785 aa12.12□□□□□ -0.47
CDH13-210ENST00000567445 KLRG2A4D1S0 409 aaPredicted RBP12.12□□□□□ -0.47
CDH13-210ENST00000567445 EIF4A1P60842 406 aaKnown RBP12.12□□□□□ -0.47
CDH13-210ENST00000567445 THUMPD2Q9BTF0 503 aaKnown RBP12.12□□□□□ -0.47
CDH13-210ENST00000567445 NPR1P16066 1061 aa12.11□□□□□ -0.47
CDH13-210ENST00000567445 HLFQ16534 295 aa12.11□□□□□ -0.47
CDH13-210ENST00000567445 CACNA1SQ13698 1873 aa12.11□□□□□ -0.47
CDH13-210ENST00000567445 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
CDH13-210ENST00000567445 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
CDH13-210ENST00000567445 RALBP1Q15311 655 aa12.1□□□□□ -0.47
CDH13-210ENST00000567445 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms