RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 SEPT12Q8IYM1 358 aa13.38□□□□□ -0.27
VPS9D1-206ENST00000567379 OTUD7AQ8TE49 926 aaPredicted RBP13.38□□□□□ -0.27
VPS9D1-206ENST00000567379 RREB1Q92766 1687 aa13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 MX1P20591 662 aa13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 PDE1AP54750 535 aa13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 EIF5P55010 431 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 ITPK1Q13572 414 aa13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 RABL6Q3YEC7 729 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 INTS5Q6P9B9 1019 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 KRT27Q7Z3Y8 459 aa13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 DZIP3Q86Y13 1208 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 JARID2Q92833 1246 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 AOX1Q06278 1338 aa13.37□□□□□ -0.27
VPS9D1-206ENST00000567379 BTAF1O14981 1849 aa13.36□□□□□ -0.27
VPS9D1-206ENST00000567379 CDC45O75419 566 aa13.36□□□□□ -0.27
VPS9D1-206ENST00000567379 EPHA10Q5JZY3 1008 aa13.36□□□□□ -0.27
VPS9D1-206ENST00000567379 DDRGK1Q96HY6 314 aa13.36□□□□□ -0.27
VPS9D1-206ENST00000567379 IL1RAPL2Q9NP60 686 aa13.36□□□□□ -0.27
VPS9D1-206ENST00000567379 STAP2Q9UGK3 403 aa13.36□□□□□ -0.27
VPS9D1-206ENST00000567379 PA2G4Q9UQ80 394 aaKnown RBP13.36□□□□□ -0.27
VPS9D1-206ENST00000567379 NUP98P52948 1817 aa13.35□□□□□ -0.27
VPS9D1-206ENST00000567379 SEC24BO95487 1268 aa13.35□□□□□ -0.27
VPS9D1-206ENST00000567379 PCCAP05165 728 aaPredicted RBP13.35□□□□□ -0.27
VPS9D1-206ENST00000567379 GSPT1P15170 499 aaKnown RBP13.35□□□□□ -0.27
VPS9D1-206ENST00000567379 CLASRPQ8N2M8 674 aaKnown RBP13.35□□□□□ -0.27
VPS9D1-206ENST00000567379 COPRSQ9NQ92 184 aa13.35□□□□□ -0.27
VPS9D1-206ENST00000567379 TBC1D2BQ9UPU7 963 aa13.35□□□□□ -0.27
VPS9D1-206ENST00000567379 COL5A3P25940 1745 aaPredicted RBP13.35□□□□□ -0.27
VPS9D1-206ENST00000567379 SALL3Q9BXA9 1300 aa13.35□□□□□ -0.27
VPS9D1-206ENST00000567379 FOXO4P98177 505 aa13.34□□□□□ -0.27
VPS9D1-206ENST00000567379 HLFQ16534 295 aa13.34□□□□□ -0.27
VPS9D1-206ENST00000567379 CASC1Q6TDU7 716 aa13.34□□□□□ -0.27
VPS9D1-206ENST00000567379 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
VPS9D1-206ENST00000567379 ZBTB38Q8NAP3 1195 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-206ENST00000567379 ZNF784Q8NCA9 323 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-206ENST00000567379 IPO9Q96P70 1041 aaKnown RBP13.34□□□□□ -0.27
VPS9D1-206ENST00000567379 CHMP3Q9Y3E7 222 aa13.34□□□□□ -0.27
VPS9D1-206ENST00000567379 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
VPS9D1-206ENST00000567379 MYH14Q7Z406 1995 aaKnown RBP13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 C1QTNF8P60827 252 aa13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 EN1Q05925 392 aaPredicted RBP13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 RTL5Q5HYW3 569 aaPredicted RBP13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 NLRP10Q86W26 655 aa13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 NUTM1Q86Y26 1132 aa13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 GPATCH3Q96I76 525 aa13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 PLA2G12BQ9BX93 195 aa13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 CDHR2Q9BYE9 1310 aa13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 CNTNAP4Q9C0A0 1308 aa13.33□□□□□ -0.28
VPS9D1-206ENST00000567379 IFIT2P09913 472 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 SDSP20132 328 aa13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 GPTP24298 496 aa13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 RFX5P48382 616 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 MFAP1P55081 439 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 RC3H1Q5TC82 1133 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 TBC1D9Q6ZT07 1266 aa13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 ZNF34Q8IZ26 560 aa13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 LINC00116Q8NCU8 138 aa13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 SIL1Q9H173 461 aa13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
VPS9D1-206ENST00000567379 ERC2O15083 957 aa13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 SASH1O94885 1247 aa13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 PTPN12Q05209 780 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 FAM196AQ6ZSG2 479 aa13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 PTF1AQ7RTS3 328 aa13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 BCL11BQ9C0K0 894 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 PPP1R1BQ9UD71 204 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 TRMT112Q9UI30 125 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 CCNL1Q9UK58 526 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 TTC41PQ6P2S7 1318 aa13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 USP42Q9H9J4 1324 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-206ENST00000567379 PARP10Q53GL7 1025 aa13.3□□□□□ -0.28
VPS9D1-206ENST00000567379 AACSQ86V21 672 aa13.3□□□□□ -0.28
VPS9D1-206ENST00000567379 KLHDC4Q8TBB5 520 aa13.3□□□□□ -0.28
VPS9D1-206ENST00000567379 FAM89AQ96GI7 184 aa13.3□□□□□ -0.28
VPS9D1-206ENST00000567379 TBC1D32Q96NH3 1257 aa13.3□□□□□ -0.28
VPS9D1-206ENST00000567379 LY75O60449 1722 aa13.3□□□□□ -0.28
VPS9D1-206ENST00000567379 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
VPS9D1-206ENST00000567379 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
VPS9D1-206ENST00000567379 RGL2O15211 777 aa13.29□□□□□ -0.28
VPS9D1-206ENST00000567379 GLRX3O76003 335 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-206ENST00000567379 HSP90B1P14625 803 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-206ENST00000567379 CCDC57Q2TAC2 916 aa13.29□□□□□ -0.28
VPS9D1-206ENST00000567379 TSHZ3Q63HK5 1081 aa13.29□□□□□ -0.28
VPS9D1-206ENST00000567379 C22orf23Q9BZE7 217 aa13.29□□□□□ -0.28
VPS9D1-206ENST00000567379 ECHDC1Q9NTX5 307 aa13.29□□□□□ -0.28
VPS9D1-206ENST00000567379 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
VPS9D1-206ENST00000567379 BCORQ6W2J9 1755 aa13.28□□□□□ -0.28
VPS9D1-206ENST00000567379 IRS4O14654 1257 aaPredicted RBP13.28□□□□□ -0.28
VPS9D1-206ENST00000567379 RPS6KA4O75676 772 aa13.28□□□□□ -0.28
VPS9D1-206ENST00000567379 CSF1RP07333 972 aa13.28□□□□□ -0.28
VPS9D1-206ENST00000567379 IL15P40933 162 aaPredicted RBP13.28□□□□□ -0.28
VPS9D1-206ENST00000567379 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
VPS9D1-206ENST00000567379 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
VPS9D1-206ENST00000567379 AK7Q96M32 723 aa13.28□□□□□ -0.28
VPS9D1-206ENST00000567379 UTP14AQ9BVJ6 771 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-206ENST00000567379 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
VPS9D1-206ENST00000567379 MYH3P11055 1940 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms