RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	SUSD4	Q5VX71	490 aa		11.81	□□□□□ -0.52
FANCA-223	ENST00000567284	CLEC4G	Q6UXB4	293 aa		11.81	□□□□□ -0.52
FANCA-223	ENST00000567284	NLRP10	Q86W26	655 aa		11.81	□□□□□ -0.52
FANCA-223	ENST00000567284	ZNF34	Q8IZ26	560 aa		11.81	□□□□□ -0.52
FANCA-223	ENST00000567284	SETDB2	Q96T68	719 aa		11.81	□□□□□ -0.52
FANCA-223	ENST00000567284	MEIS3	Q99687	375 aa		11.81	□□□□□ -0.52
FANCA-223	ENST00000567284	C1orf115	Q9H7X2	142 aa		11.81	□□□□□ -0.52
FANCA-223	ENST00000567284	UBN2	Q6ZU65	1347 aa		11.81	□□□□□ -0.52
FANCA-223	ENST00000567284	DDX60	Q8IY21	1712 aa	Known RBP	11.8	□□□□□ -0.52
FANCA-223	ENST00000567284	LAMB2	P55268	1798 aa		11.8	□□□□□ -0.52
FANCA-223	ENST00000567284	NFIX	Q14938	502 aa		11.8	□□□□□ -0.52
FANCA-223	ENST00000567284	CCDC191	Q8NCU4	936 aa		11.8	□□□□□ -0.52
FANCA-223	ENST00000567284	TRMT112	Q9UI30	125 aa	Known RBP	11.8	□□□□□ -0.52
FANCA-223	ENST00000567284	GRM8	O00222	908 aa		11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	ZBTB7B	O15156	539 aa	Predicted RBP	11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	UBTFL1	P0CB47	393 aa	Predicted RBP	11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	GTF2E1	P29083	439 aa	Predicted RBP	11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	UBE3B	Q7Z3V4	1068 aa		11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	PPP1R42	Q7Z4L9	355 aa		11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	NUTM1	Q86Y26	1132 aa		11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	SYNE4	Q8N205	404 aa		11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	CCDC24	Q8N4L8	307 aa		11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	FAM89A	Q96GI7	184 aa		11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	UTP14A	Q9BVJ6	771 aa	Known RBP	11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	USP44	Q9H0E7	712 aa		11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	SPEF2	Q9C093	1822 aa		11.79	□□□□□ -0.52
FANCA-223	ENST00000567284	ZBTB7A	O95365	584 aa		11.78	□□□□□ -0.52
FANCA-223	ENST00000567284	GNAI3	P08754	354 aa		11.78	□□□□□ -0.52
FANCA-223	ENST00000567284	PARP10	Q53GL7	1025 aa		11.78	□□□□□ -0.52
FANCA-223	ENST00000567284	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.78	□□□□□ -0.52
FANCA-223	ENST00000567284	NLGN1	Q8N2Q7	840 aa		11.78	□□□□□ -0.52
FANCA-223	ENST00000567284	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.78	□□□□□ -0.52
FANCA-223	ENST00000567284	TAF1	P21675	1872 aa		11.78	□□□□□ -0.52
FANCA-223	ENST00000567284	CACNA1S	Q13698	1873 aa		11.78	□□□□□ -0.52
FANCA-223	ENST00000567284	TM4SF1	P30408	202 aa		11.77	□□□□□ -0.53
FANCA-223	ENST00000567284	TRIM28	Q13263	835 aa	Known RBP	11.77	□□□□□ -0.53
FANCA-223	ENST00000567284	ERFE	Q4G0M1	354 aa		11.77	□□□□□ -0.53
FANCA-223	ENST00000567284	SUCLG2	Q96I99	432 aa		11.77	□□□□□ -0.53
FANCA-223	ENST00000567284	CHMP4B	Q9H444	224 aa	Known RBP	11.77	□□□□□ -0.53
FANCA-223	ENST00000567284	GTF3C3	Q9Y5Q9	886 aa		11.77	□□□□□ -0.53
FANCA-223	ENST00000567284	LRRFIP2	Q9Y608	721 aa	Known RBP	11.77	□□□□□ -0.53
FANCA-223	ENST00000567284	PARP3	Q9Y6F1	533 aa		11.77	□□□□□ -0.53
FANCA-223	ENST00000567284	CARMIL3	Q8ND23	1372 aa		11.77	□□□□□ -0.53
FANCA-223	ENST00000567284		H7C1W4	665 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	RGL2	O15211	777 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	NTSR2	O95665	410 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	GNAI2	P04899	355 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	SERPINB2	P05120	415 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	PCCA	P05165	728 aa	Predicted RBP	11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	MMP10	P09238	476 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	HCLS1	P14317	486 aa	Predicted RBP	11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	DDR1	Q08345	913 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	NYX	Q9GZU5	481 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	ZBTB40	Q9NUA8	1239 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	CHMP3	Q9Y3E7	222 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	ANKRD31	Q8N7Z5	1873 aa		11.76	□□□□□ -0.53
FANCA-223	ENST00000567284	POLRMT	O00411	1230 aa	Known RBP	11.75	□□□□□ -0.53
FANCA-223	ENST00000567284	IRS4	O14654	1257 aa	Predicted RBP	11.75	□□□□□ -0.53
FANCA-223	ENST00000567284	CASP7	P55210	303 aa		11.75	□□□□□ -0.53
FANCA-223	ENST00000567284	TPTE2	Q6XPS3	522 aa		11.75	□□□□□ -0.53
FANCA-223	ENST00000567284	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.75	□□□□□ -0.53
FANCA-223	ENST00000567284	SH3TC1	Q8TE82	1336 aa		11.75	□□□□□ -0.53
FANCA-223	ENST00000567284	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.75	□□□□□ -0.53
FANCA-223	ENST00000567284	NRXN2	Q9P2S2	1712 aa		11.74	□□□□□ -0.53
FANCA-223	ENST00000567284	ST5	P78524	1137 aa		11.74	□□□□□ -0.53
FANCA-223	ENST00000567284	CNBD1	Q8NA66	436 aa		11.74	□□□□□ -0.53
FANCA-223	ENST00000567284	SLC16A10	Q8TF71	515 aa		11.74	□□□□□ -0.53
FANCA-223	ENST00000567284	BICC1	Q9H694	974 aa	Known RBP	11.74	□□□□□ -0.53
FANCA-223	ENST00000567284	UTY	O14607	1347 aa		11.74	□□□□□ -0.53
FANCA-223	ENST00000567284	EPHA10	Q5JZY3	1008 aa		11.73	□□□□□ -0.53
FANCA-223	ENST00000567284	PRR5L	Q6MZQ0	368 aa		11.73	□□□□□ -0.53
FANCA-223	ENST00000567284	ABCC12	Q96J65	1359 aa		11.73	□□□□□ -0.53
FANCA-223	ENST00000567284	CDHR2	Q9BYE9	1310 aa		11.73	□□□□□ -0.53
FANCA-223	ENST00000567284	HDAC5	Q9UQL6	1122 aa		11.73	□□□□□ -0.53
FANCA-223	ENST00000567284	PCDHB15	Q9Y5E8	787 aa		11.73	□□□□□ -0.53
FANCA-223	ENST00000567284	PDE8A	O60658	829 aa		11.72	□□□□□ -0.53
FANCA-223	ENST00000567284	FOXO4	P98177	505 aa		11.72	□□□□□ -0.53
FANCA-223	ENST00000567284	LMBR1L	Q6UX01	489 aa		11.72	□□□□□ -0.53
FANCA-223	ENST00000567284	KAZALD1	Q96I82	304 aa		11.72	□□□□□ -0.53
FANCA-223	ENST00000567284	MTFR1L	Q9H019	292 aa		11.72	□□□□□ -0.53
FANCA-223	ENST00000567284	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.71	□□□□□ -0.53
FANCA-223	ENST00000567284	POLD1	P28340	1107 aa		11.71	□□□□□ -0.53
FANCA-223	ENST00000567284	CTSW	P56202	376 aa		11.71	□□□□□ -0.53
FANCA-223	ENST00000567284	B4GALNT3	Q6L9W6	998 aa		11.71	□□□□□ -0.53
FANCA-223	ENST00000567284	CEP85	Q6P2H3	762 aa		11.71	□□□□□ -0.53
FANCA-223	ENST00000567284	C3orf67	Q6ZVT6	689 aa		11.71	□□□□□ -0.53
FANCA-223	ENST00000567284	KLHL34	Q8N239	644 aa		11.71	□□□□□ -0.53
FANCA-223	ENST00000567284	ANKRD44	Q8N8A2	993 aa		11.71	□□□□□ -0.53
FANCA-223	ENST00000567284	COL11A2	P13942	1736 aa	Predicted RBP	11.7	□□□□□ -0.54
FANCA-223	ENST00000567284	PNMA6E	A0A0J9YXQ4	647 aa		11.7	□□□□□ -0.54
FANCA-223	ENST00000567284	SRGAP3	O43295	1099 aa		11.7	□□□□□ -0.54
FANCA-223	ENST00000567284	HSP90B1	P14625	803 aa	Known RBP	11.7	□□□□□ -0.54
FANCA-223	ENST00000567284	ATP8B2	P98198	1209 aa		11.7	□□□□□ -0.54
FANCA-223	ENST00000567284	CCDC136	Q96JN2	1154 aa		11.7	□□□□□ -0.54
FANCA-223	ENST00000567284	NLRP3	Q96P20	1036 aa		11.7	□□□□□ -0.54
FANCA-223	ENST00000567284	BCL11A	Q9H165	835 aa		11.7	□□□□□ -0.54
FANCA-223	ENST00000567284	PPP4R2	Q9NY27	417 aa		11.7	□□□□□ -0.54
FANCA-223	ENST00000567284	AAMP	Q13685	434 aa		11.69	□□□□□ -0.54

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