RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SPATA31A1Q5TZJ5 1347 aa20.2■□□□□ 0.82
CMTM3-213ENST00000566756 ERC1Q8IUD2 1116 aa20.2■□□□□ 0.82
CMTM3-213ENST00000566756 TTC14Q96N46 770 aa20.2■□□□□ 0.82
CMTM3-213ENST00000566756 DDX58O95786 925 aaKnown RBP20.19■□□□□ 0.82
CMTM3-213ENST00000566756 TMEM87AQ8NBN3 555 aa20.19■□□□□ 0.82
CMTM3-213ENST00000566756 RUFY2Q8WXA3 655 aa20.19■□□□□ 0.82
CMTM3-213ENST00000566756 IL25Q9H293 177 aa20.19■□□□□ 0.82
CMTM3-213ENST00000566756 JCADQ9P266 1359 aa20.19■□□□□ 0.82
CMTM3-213ENST00000566756 EXOC5O00471 708 aa20.19■□□□□ 0.82
CMTM3-213ENST00000566756 USP16Q9Y5T5 823 aa20.19■□□□□ 0.82
CMTM3-213ENST00000566756 SNX14Q9Y5W7 946 aa20.19■□□□□ 0.82
CMTM3-213ENST00000566756 KIAA1211Q6ZU35 1233 aa20.18■□□□□ 0.82
CMTM3-213ENST00000566756 UPF3BQ9BZI7 483 aaKnown RBP20.18■□□□□ 0.82
CMTM3-213ENST00000566756 RBM27Q9P2N5 1060 aaKnown RBP20.18■□□□□ 0.82
CMTM3-213ENST00000566756 PHF14O94880 888 aa20.17■□□□□ 0.82
CMTM3-213ENST00000566756 LRP10Q7Z4F1 713 aa20.17■□□□□ 0.82
CMTM3-213ENST00000566756 CLASRPQ8N2M8 674 aaKnown RBP20.17■□□□□ 0.82
CMTM3-213ENST00000566756 GPATCH3Q96I76 525 aa20.17■□□□□ 0.82
CMTM3-213ENST00000566756 TMOD3Q9NYL9 352 aa20.17■□□□□ 0.82
CMTM3-213ENST00000566756 NUTM2BA6NNL0 878 aaPredicted RBP20.16■□□□□ 0.82
CMTM3-213ENST00000566756 NUTM2EB1AL46 878 aaPredicted RBP20.16■□□□□ 0.82
CMTM3-213ENST00000566756 MSNP26038 577 aaKnown RBP20.16■□□□□ 0.82
CMTM3-213ENST00000566756 NUTM2AQ8IVF1 878 aaPredicted RBP20.16■□□□□ 0.82
CMTM3-213ENST00000566756 KCNB2Q92953 911 aa20.16■□□□□ 0.82
CMTM3-213ENST00000566756 MAP3K2Q9Y2U5 619 aa20.16■□□□□ 0.82
CMTM3-213ENST00000566756 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.16■□□□□ 0.82
CMTM3-213ENST00000566756 UTYO14607 1347 aa20.16■□□□□ 0.82
CMTM3-213ENST00000566756 SPATA31A5Q5VU36 1347 aa20.16■□□□□ 0.82
CMTM3-213ENST00000566756 SPATA31A7Q8IWB4 1347 aa20.16■□□□□ 0.82
CMTM3-213ENST00000566756 MCM5P33992 734 aa20.15■□□□□ 0.82
CMTM3-213ENST00000566756 TM6SF1Q9BZW5 370 aa20.15■□□□□ 0.82
CMTM3-213ENST00000566756 NOL7Q9UMY1 257 aaKnown RBP20.15■□□□□ 0.82
CMTM3-213ENST00000566756 LIMCH1Q9UPQ0 1083 aa20.15■□□□□ 0.82
CMTM3-213ENST00000566756 SYCE3A1L190 88 aa20.15■□□□□ 0.82
CMTM3-213ENST00000566756 CERKQ8TCT0 537 aa20.15■□□□□ 0.82
CMTM3-213ENST00000566756 ECHDC1Q9NTX5 307 aa20.15■□□□□ 0.82
CMTM3-213ENST00000566756 NSFL1CQ9UNZ2 370 aaKnown RBP20.15■□□□□ 0.82
CMTM3-213ENST00000566756 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
CMTM3-213ENST00000566756 BARGINQ6ZT62 677 aa20.14■□□□□ 0.81
CMTM3-213ENST00000566756 RPAP1Q9BWH6 1393 aaPredicted RBP20.14■□□□□ 0.81
CMTM3-213ENST00000566756 TPM2P07951 284 aa20.14■□□□□ 0.81
CMTM3-213ENST00000566756 TERF1P54274 439 aa20.14■□□□□ 0.81
CMTM3-213ENST00000566756 LINS1Q8NG48 757 aa20.14■□□□□ 0.81
CMTM3-213ENST00000566756 DIAPH3Q9NSV4 1193 aa20.13■□□□□ 0.81
CMTM3-213ENST00000566756 HIP1O00291 1037 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 ZNF500O60304 480 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-213ENST00000566756 PDIA4P13667 645 aaKnown RBP20.12■□□□□ 0.81
CMTM3-213ENST00000566756 OS9Q13438 667 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-213ENST00000566756 VSIG10Q8N0Z9 540 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 EVI5LQ96CN4 794 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 C9orf78Q9NZ63 289 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-213ENST00000566756 ATP6V1DQ9Y5K8 247 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 SPATA31A6Q5VVP1 1343 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 BCL9O00512 1426 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 OFD1O75665 1012 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 MYL6BP14649 208 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 AK2P54819 239 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-213ENST00000566756 NOL8Q76FK4 1167 aaKnown RBP20.12■□□□□ 0.81
CMTM3-213ENST00000566756 COPS6Q7L5N1 327 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 XAGE3Q8WTP9 111 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-213ENST00000566756 PIGBQ92521 554 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 ZSCAN31Q96LW9 406 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-213ENST00000566756 TSPY26PQ9H489 355 aa20.12■□□□□ 0.81
CMTM3-213ENST00000566756 KAT6BQ8WYB5 2073 aa20.11■□□□□ 0.81
CMTM3-213ENST00000566756 MAP4K4O95819 1239 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-213ENST00000566756 ZSCAN22P10073 491 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-213ENST00000566756 VPS53Q5VIR6 699 aa20.11■□□□□ 0.81
CMTM3-213ENST00000566756 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-213ENST00000566756 FAM184AQ8NB25 1140 aa20.11■□□□□ 0.81
CMTM3-213ENST00000566756 CHAMP1Q96JM3 812 aa20.11■□□□□ 0.81
CMTM3-213ENST00000566756 SNRKQ9NRH2 765 aa20.11■□□□□ 0.81
CMTM3-213ENST00000566756 ARFGEF2Q9Y6D5 1785 aa20.11■□□□□ 0.81
CMTM3-213ENST00000566756 LETM1O95202 739 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-213ENST00000566756 AIMP1Q12904 312 aaKnown RBP20.1■□□□□ 0.81
CMTM3-213ENST00000566756 CWC27Q6UX04 472 aaKnown RBP20.1■□□□□ 0.81
CMTM3-213ENST00000566756 RIC3Q7Z5B4 369 aa20.1■□□□□ 0.81
CMTM3-213ENST00000566756 RASEFQ8IZ41 740 aa20.1■□□□□ 0.81
CMTM3-213ENST00000566756 TEX13AQ9BXU3 409 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-213ENST00000566756 SH2B1Q9NRF2 756 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-213ENST00000566756 DDB1Q16531 1140 aa20.1■□□□□ 0.81
CMTM3-213ENST00000566756 ANKRD13DQ6ZTN6 518 aa20.1■□□□□ 0.81
CMTM3-213ENST00000566756 RUFY3Q7L099 469 aa20.1■□□□□ 0.81
CMTM3-213ENST00000566756 CCDC39Q9UFE4 941 aa20.1■□□□□ 0.81
CMTM3-213ENST00000566756 DOT1LQ8TEK3 1739 aa20.09■□□□□ 0.81
CMTM3-213ENST00000566756 IFIT2P09913 472 aaKnown RBP20.09■□□□□ 0.81
CMTM3-213ENST00000566756 UVSSAQ2YD98 709 aa20.09■□□□□ 0.81
CMTM3-213ENST00000566756 USP48Q86UV5 1035 aa20.09■□□□□ 0.81
CMTM3-213ENST00000566756 METTL22Q9BUU2 404 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-213ENST00000566756 ZSWIM6Q9HCJ5 1215 aa20.09■□□□□ 0.81
CMTM3-213ENST00000566756 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.09■□□□□ 0.81
CMTM3-213ENST00000566756 STX6O43752 255 aa20.08■□□□□ 0.81
CMTM3-213ENST00000566756 NEXNQ0ZGT2 675 aa20.08■□□□□ 0.81
CMTM3-213ENST00000566756 ATG3Q9NT62 314 aa20.08■□□□□ 0.81
CMTM3-213ENST00000566756 BCL9LQ86UU0 1499 aa20.08■□□□□ 0.8
CMTM3-213ENST00000566756 GRM8O00222 908 aa20.08■□□□□ 0.8
CMTM3-213ENST00000566756 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.8
CMTM3-213ENST00000566756 CSPP1Q1MSJ5 1256 aa20.08■□□□□ 0.8
CMTM3-213ENST00000566756 FNBP4Q8N3X1 1017 aaPredicted RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms