RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 C8orf58Q8NAV2 365 aa16.37■□□□□ 0.21
LPCAT4-206ENST00000566581 PLBD2Q8NHP8 589 aa16.37■□□□□ 0.21
LPCAT4-206ENST00000566581 LTBP3Q9NS15 1303 aa16.37■□□□□ 0.21
LPCAT4-206ENST00000566581 ABCC12Q96J65 1359 aa16.37■□□□□ 0.21
LPCAT4-206ENST00000566581 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
LPCAT4-206ENST00000566581 SLC10A5Q5PT55 438 aa16.36■□□□□ 0.21
LPCAT4-206ENST00000566581 ZNF526Q8TF50 670 aaPredicted RBP16.36■□□□□ 0.21
LPCAT4-206ENST00000566581 UTP14AQ9BVJ6 771 aaKnown RBP16.36■□□□□ 0.21
LPCAT4-206ENST00000566581 ELL2O00472 640 aaPredicted RBP16.35■□□□□ 0.21
LPCAT4-206ENST00000566581 PRELPP51888 382 aa16.35■□□□□ 0.21
LPCAT4-206ENST00000566581 NLRP10Q86W26 655 aa16.35■□□□□ 0.21
LPCAT4-206ENST00000566581 LAMB2P55268 1798 aa16.35■□□□□ 0.21
LPCAT4-206ENST00000566581 CCDC30Q5VVM6 783 aa16.34■□□□□ 0.21
LPCAT4-206ENST00000566581 WDR63Q8IWG1 891 aa16.34■□□□□ 0.21
LPCAT4-206ENST00000566581 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.21
LPCAT4-206ENST00000566581 CEP350Q5VT06 3117 aa16.33■□□□□ 0.21
LPCAT4-206ENST00000566581 KIF3CO14782 793 aa16.33■□□□□ 0.2
LPCAT4-206ENST00000566581 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
LPCAT4-206ENST00000566581 TSPYL6Q8N831 410 aa16.33■□□□□ 0.2
LPCAT4-206ENST00000566581 NLRP3Q96P20 1036 aa16.33■□□□□ 0.2
LPCAT4-206ENST00000566581 TAOK3Q9H2K8 898 aa16.33■□□□□ 0.2
LPCAT4-206ENST00000566581 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
LPCAT4-206ENST00000566581 CCDC93Q567U6 631 aa16.32■□□□□ 0.2
LPCAT4-206ENST00000566581 FAM9BQ8IZU0 186 aa16.32■□□□□ 0.2
LPCAT4-206ENST00000566581 KDM2BQ8NHM5 1336 aa16.32■□□□□ 0.2
LPCAT4-206ENST00000566581 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
LPCAT4-206ENST00000566581 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
LPCAT4-206ENST00000566581 CRAMP1Q96RY5 1269 aa16.32■□□□□ 0.2
LPCAT4-206ENST00000566581 ISCA1Q9BUE6 129 aa16.32■□□□□ 0.2
LPCAT4-206ENST00000566581 SENP3-EIF4A1A0A087X0R7 540 aa16.31■□□□□ 0.2
LPCAT4-206ENST00000566581 CC2D2BQ6DHV5 1058 aa16.31■□□□□ 0.2
LPCAT4-206ENST00000566581 RTKN2Q8IZC4 609 aa16.31■□□□□ 0.2
LPCAT4-206ENST00000566581 TRMT112Q9UI30 125 aaKnown RBP16.31■□□□□ 0.2
LPCAT4-206ENST00000566581 SH3TC1Q8TE82 1336 aa16.3■□□□□ 0.2
LPCAT4-206ENST00000566581 GLTPD2A6NH11 291 aa16.3■□□□□ 0.2
LPCAT4-206ENST00000566581 GRIPAP1Q4V328 841 aa16.3■□□□□ 0.2
LPCAT4-206ENST00000566581 RBM17Q96I25 401 aaKnown RBP16.3■□□□□ 0.2
LPCAT4-206ENST00000566581 PHAXQ9H814 394 aaKnown RBP16.3■□□□□ 0.2
LPCAT4-206ENST00000566581 NMRK2Q9NPI5 230 aa16.3■□□□□ 0.2
LPCAT4-206ENST00000566581 TAF1P21675 1872 aa16.3■□□□□ 0.2
LPCAT4-206ENST00000566581 DDX60Q8IY21 1712 aaKnown RBP16.3■□□□□ 0.2
LPCAT4-206ENST00000566581 GOLGA2Q08379 1002 aa16.29■□□□□ 0.2
LPCAT4-206ENST00000566581 TWISTNBQ3B726 338 aaPredicted RBP16.29■□□□□ 0.2
LPCAT4-206ENST00000566581 C3orf67Q6ZVT6 689 aa16.29■□□□□ 0.2
LPCAT4-206ENST00000566581 RIC3Q7Z5B4 369 aa16.29■□□□□ 0.2
LPCAT4-206ENST00000566581 TOMM70O94826 608 aa16.28■□□□□ 0.2
LPCAT4-206ENST00000566581 FKBP4Q02790 459 aaKnown RBP eCLIP16.28■□□□□ 0.2
LPCAT4-206ENST00000566581 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
LPCAT4-206ENST00000566581 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
LPCAT4-206ENST00000566581 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
LPCAT4-206ENST00000566581 FANCIQ9NVI1 1328 aa16.27■□□□□ 0.2
LPCAT4-206ENST00000566581 ATP5J2-PTCD1G3V325 749 aa16.27■□□□□ 0.2
LPCAT4-206ENST00000566581 DDX58O95786 925 aaKnown RBP16.27■□□□□ 0.2
LPCAT4-206ENST00000566581 HCLS1P14317 486 aaPredicted RBP16.27■□□□□ 0.2
LPCAT4-206ENST00000566581 DPY19L2Q6NUT2 758 aa16.27■□□□□ 0.2
LPCAT4-206ENST00000566581 OLFM4Q6UX06 510 aa16.27■□□□□ 0.2
LPCAT4-206ENST00000566581 PSMD1Q99460 953 aa16.27■□□□□ 0.2
LPCAT4-206ENST00000566581 STK31Q9BXU1 1019 aa16.27■□□□□ 0.2
LPCAT4-206ENST00000566581 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
LPCAT4-206ENST00000566581 WDR90Q96KV7 1748 aa16.25■□□□□ 0.19
LPCAT4-206ENST00000566581 BBOX1O75936 387 aa16.25■□□□□ 0.19
LPCAT4-206ENST00000566581 KSR2Q6VAB6 950 aa16.25■□□□□ 0.19
LPCAT4-206ENST00000566581 CCDC191Q8NCU4 936 aa16.25■□□□□ 0.19
LPCAT4-206ENST00000566581 FAM89AQ96GI7 184 aa16.25■□□□□ 0.19
LPCAT4-206ENST00000566581 METTL22Q9BUU2 404 aaPredicted RBP16.25■□□□□ 0.19
LPCAT4-206ENST00000566581 MYH3P11055 1940 aa16.25■□□□□ 0.19
LPCAT4-206ENST00000566581 PPEF1O14829 653 aaPredicted RBP16.24■□□□□ 0.19
LPCAT4-206ENST00000566581 VAMP4O75379 141 aa16.24■□□□□ 0.19
LPCAT4-206ENST00000566581 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
LPCAT4-206ENST00000566581 VEGFAP15692 232 aaPredicted RBP16.24■□□□□ 0.19
LPCAT4-206ENST00000566581 SF3B3Q15393 1217 aaKnown RBP16.24■□□□□ 0.19
LPCAT4-206ENST00000566581 ZBTB38Q8NAP3 1195 aaPredicted RBP16.24■□□□□ 0.19
LPCAT4-206ENST00000566581 RBM46Q8TBY0 533 aaKnown RBP16.24■□□□□ 0.19
LPCAT4-206ENST00000566581 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
LPCAT4-206ENST00000566581 ATP6V0A2Q9Y487 856 aa16.24■□□□□ 0.19
LPCAT4-206ENST00000566581 SCN4AP35499 1836 aa16.24■□□□□ 0.19
LPCAT4-206ENST00000566581 ABCC4O15439 1325 aa16.23■□□□□ 0.19
LPCAT4-206ENST00000566581 ZNF521Q96K83 1311 aa16.23■□□□□ 0.19
LPCAT4-206ENST00000566581 PI4KAP2A4QPH2 592 aa16.23■□□□□ 0.19
LPCAT4-206ENST00000566581 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
LPCAT4-206ENST00000566581 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
LPCAT4-206ENST00000566581 PI4KAP1Q8N8J0 262 aa16.23■□□□□ 0.19
LPCAT4-206ENST00000566581 MYD88Q99836 296 aa16.23■□□□□ 0.19
LPCAT4-206ENST00000566581 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
LPCAT4-206ENST00000566581 ZNF277Q9NRM2 450 aaPredicted RBP16.23■□□□□ 0.19
LPCAT4-206ENST00000566581 MAP3K2Q9Y2U5 619 aa16.23■□□□□ 0.19
LPCAT4-206ENST00000566581 CCER2I3L3R5 266 aa16.22■□□□□ 0.19
LPCAT4-206ENST00000566581 IARSP41252 1262 aaKnown RBP16.22■□□□□ 0.19
LPCAT4-206ENST00000566581 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
LPCAT4-206ENST00000566581 TMC4Q7Z404 712 aa16.22■□□□□ 0.19
LPCAT4-206ENST00000566581 SP8Q8IXZ3 490 aa16.22■□□□□ 0.19
LPCAT4-206ENST00000566581 C16orf71Q8IYS4 520 aaPredicted RBP16.22■□□□□ 0.19
LPCAT4-206ENST00000566581 TMX4Q9H1E5 349 aaPredicted RBP16.22■□□□□ 0.19
LPCAT4-206ENST00000566581 IRS4O14654 1257 aaPredicted RBP16.21■□□□□ 0.19
LPCAT4-206ENST00000566581 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
LPCAT4-206ENST00000566581 GRAPQ13588 217 aa16.21■□□□□ 0.19
LPCAT4-206ENST00000566581 G2E3Q7L622 706 aa16.21■□□□□ 0.19
LPCAT4-206ENST00000566581 GRAPLQ8TC17 118 aaPredicted RBP16.21■□□□□ 0.19
LPCAT4-206ENST00000566581 VPS33BQ9H267 617 aa16.21■□□□□ 0.19
LPCAT4-206ENST00000566581 CWC25Q9NXE8 425 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms