RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 GRM8O00222 908 aa17.01■□□□□ 0.31
CDH1-209ENST00000566510 NECTIN1Q15223 517 aa17.01■□□□□ 0.31
CDH1-209ENST00000566510 AMOTQ4VCS5 1084 aa17.01■□□□□ 0.31
CDH1-209ENST00000566510 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
CDH1-209ENST00000566510 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
CDH1-209ENST00000566510 SASS6Q6UVJ0 657 aa17■□□□□ 0.31
CDH1-209ENST00000566510 TLR7Q9NYK1 1049 aaKnown RBP17■□□□□ 0.31
CDH1-209ENST00000566510 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
CDH1-209ENST00000566510 SASH1O94885 1247 aa17■□□□□ 0.31
CDH1-209ENST00000566510 COL9A3Q14050 684 aaPredicted RBP16.99■□□□□ 0.31
CDH1-209ENST00000566510 FAM173BQ6P4H8 233 aa16.99■□□□□ 0.31
CDH1-209ENST00000566510 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
CDH1-209ENST00000566510 C17orf53Q8N3J3 647 aaPredicted RBP16.99■□□□□ 0.31
CDH1-209ENST00000566510 TM6SF1Q9BZW5 370 aa16.99■□□□□ 0.31
CDH1-209ENST00000566510 DDX58O95786 925 aaKnown RBP16.99■□□□□ 0.31
CDH1-209ENST00000566510 MYL6BP14649 208 aa16.99■□□□□ 0.31
CDH1-209ENST00000566510 STK3Q13188 491 aa16.99■□□□□ 0.31
CDH1-209ENST00000566510 KDM4AO75164 1064 aa16.98■□□□□ 0.31
CDH1-209ENST00000566510 ST3GAL1Q11201 340 aa16.98■□□□□ 0.31
CDH1-209ENST00000566510 LINS1Q8NG48 757 aa16.98■□□□□ 0.31
CDH1-209ENST00000566510 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
CDH1-209ENST00000566510 GCP02774 474 aa16.98■□□□□ 0.31
CDH1-209ENST00000566510 PSMA5P28066 241 aa16.98■□□□□ 0.31
CDH1-209ENST00000566510 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
CDH1-209ENST00000566510 HIP1O00291 1037 aa16.97■□□□□ 0.31
CDH1-209ENST00000566510 SLC27A2O14975 620 aa16.97■□□□□ 0.31
CDH1-209ENST00000566510 CAMK4Q16566 473 aa16.97■□□□□ 0.31
CDH1-209ENST00000566510 BLOC1S2Q6QNY1 142 aa16.97■□□□□ 0.31
CDH1-209ENST00000566510 MAP4K1Q92918 833 aa16.97■□□□□ 0.31
CDH1-209ENST00000566510 KAZALD1Q96I82 304 aa16.97■□□□□ 0.31
CDH1-209ENST00000566510 PXDNQ92626 1479 aa16.97■□□□□ 0.31
CDH1-209ENST00000566510 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
CDH1-209ENST00000566510 SLC39A6Q13433 755 aa16.96■□□□□ 0.31
CDH1-209ENST00000566510 NOLC1Q14978 699 aaKnown RBP eCLIP16.96■□□□□ 0.31
CDH1-209ENST00000566510 RNF20Q5VTR2 975 aa16.96■□□□□ 0.31
CDH1-209ENST00000566510 CDC37L1Q7L3B6 337 aa16.96■□□□□ 0.31
CDH1-209ENST00000566510 SPC24Q8NBT2 197 aa16.96■□□□□ 0.31
CDH1-209ENST00000566510 GOLGA6L4A6NEF3 574 aa16.96■□□□□ 0.31
CDH1-209ENST00000566510 KRT85P78386 507 aa16.96■□□□□ 0.31
CDH1-209ENST00000566510 JARID2Q92833 1246 aaPredicted RBP16.96■□□□□ 0.31
CDH1-209ENST00000566510 DYNC1I1O14576 645 aa16.95■□□□□ 0.3
CDH1-209ENST00000566510 EDC3Q96F86 508 aaKnown RBP16.95■□□□□ 0.3
CDH1-209ENST00000566510 TAF6LQ9Y6J9 622 aa16.95■□□□□ 0.3
CDH1-209ENST00000566510 NFAT5O94916 1531 aa16.95■□□□□ 0.3
CDH1-209ENST00000566510 PIBF1Q8WXW3 757 aa16.95■□□□□ 0.3
CDH1-209ENST00000566510 TFIP11Q9UBB9 837 aaKnown RBP16.95■□□□□ 0.3
CDH1-209ENST00000566510 CRYBG1Q9Y4K1 1723 aa16.95■□□□□ 0.3
CDH1-209ENST00000566510 CCDC192P0DO97 292 aa16.94■□□□□ 0.3
CDH1-209ENST00000566510 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
CDH1-209ENST00000566510 KCNB2Q92953 911 aa16.94■□□□□ 0.3
CDH1-209ENST00000566510 ORAI2Q96SN7 254 aa16.94■□□□□ 0.3
CDH1-209ENST00000566510 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDH1-209ENST00000566510 FER1L4A9Z1Z3 1794 aa16.94■□□□□ 0.3
CDH1-209ENST00000566510 TTC6Q86TZ1 520 aa16.94■□□□□ 0.3
CDH1-209ENST00000566510 USP54Q70EL1 1684 aa16.94■□□□□ 0.3
CDH1-209ENST00000566510 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
CDH1-209ENST00000566510 FUCA2Q9BTY2 467 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 NDUFB9Q9Y6M9 179 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 LMO7Q8WWI1 1683 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 IGKV5-2P06315 115 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 PDCP20941 246 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 PIP4K2AP48426 406 aaPredicted RBP16.93■□□□□ 0.3
CDH1-209ENST00000566510 ZMYND15Q9H091 742 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 AXIN2Q9Y2T1 843 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 CCDC9Q9Y3X0 531 aaKnown RBP16.93■□□□□ 0.3
CDH1-209ENST00000566510 AP5Z1O43299 807 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 ANKRD1Q15327 319 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 CKAP2LQ8IYA6 745 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 MYD88Q99836 296 aa16.93■□□□□ 0.3
CDH1-209ENST00000566510 LIG1P18858 919 aa16.92■□□□□ 0.3
CDH1-209ENST00000566510 NUP62CLQ9H1M0 184 aa16.92■□□□□ 0.3
CDH1-209ENST00000566510 RPS6KB1P23443 525 aa16.92■□□□□ 0.3
CDH1-209ENST00000566510 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
CDH1-209ENST00000566510 ANKLE2Q86XL3 938 aa16.92■□□□□ 0.3
CDH1-209ENST00000566510 MAP3K11Q16584 847 aa16.91■□□□□ 0.3
CDH1-209ENST00000566510 COPS6Q7L5N1 327 aa16.91■□□□□ 0.3
CDH1-209ENST00000566510 XAGE3Q8WTP9 111 aa16.91■□□□□ 0.3
CDH1-209ENST00000566510 SPATA32Q96LK8 384 aa16.91■□□□□ 0.3
CDH1-209ENST00000566510 MAP7D2Q96T17 732 aa16.91■□□□□ 0.3
CDH1-209ENST00000566510 PDIA6Q15084 440 aa16.91■□□□□ 0.3
CDH1-209ENST00000566510 EPHA10Q5JZY3 1008 aa16.91■□□□□ 0.3
CDH1-209ENST00000566510 TSC1Q92574 1164 aa16.91■□□□□ 0.3
CDH1-209ENST00000566510 HSP90B1P14625 803 aaKnown RBP16.9■□□□□ 0.3
CDH1-209ENST00000566510 ZC3H6P61129 1189 aaKnown RBP16.9■□□□□ 0.3
CDH1-209ENST00000566510 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
CDH1-209ENST00000566510 TNMDQ9H2S6 317 aa16.9■□□□□ 0.3
CDH1-209ENST00000566510 DACT1Q9NYF0 836 aa16.9■□□□□ 0.3
CDH1-209ENST00000566510 NEURL1BA8MQ27 555 aa16.9■□□□□ 0.3
CDH1-209ENST00000566510 TOB2Q14106 344 aaPredicted RBP16.9■□□□□ 0.3
CDH1-209ENST00000566510 ZNF790Q6PG37 636 aa16.9■□□□□ 0.3
CDH1-209ENST00000566510 GCKRQ14397 625 aa16.89■□□□□ 0.29
CDH1-209ENST00000566510 LUZP1Q86V48 1076 aa16.89■□□□□ 0.29
CDH1-209ENST00000566510 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.29
CDH1-209ENST00000566510 NCAPD2Q15021 1401 aa16.89■□□□□ 0.29
CDH1-209ENST00000566510 ADGRL3Q9HAR2 1447 aa16.89■□□□□ 0.29
CDH1-209ENST00000566510 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.29
CDH1-209ENST00000566510 UTYO14607 1347 aa16.89■□□□□ 0.29
CDH1-209ENST00000566510 FGD1P98174 961 aa16.89■□□□□ 0.29
CDH1-209ENST00000566510 MYRIPQ8NFW9 859 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms