RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 INTS3Q68E01 1043 aaKnown RBP11.75□□□□□ -0.53
SMPD3-207ENST00000566466 RIC3Q7Z5B4 369 aa11.75□□□□□ -0.53
SMPD3-207ENST00000566466 TMEM57Q8N5G2 664 aa11.75□□□□□ -0.53
SMPD3-207ENST00000566466 LINS1Q8NG48 757 aa11.75□□□□□ -0.53
SMPD3-207ENST00000566466 CLUAP1Q96AJ1 413 aa11.75□□□□□ -0.53
SMPD3-207ENST00000566466 API5Q9BZZ5 524 aaKnown RBP11.75□□□□□ -0.53
SMPD3-207ENST00000566466 MTFR1LQ9H019 292 aa11.75□□□□□ -0.53
SMPD3-207ENST00000566466 C10orf71Q711Q0 1435 aa11.75□□□□□ -0.53
SMPD3-207ENST00000566466 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
SMPD3-207ENST00000566466 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
SMPD3-207ENST00000566466 DDX58O95786 925 aaKnown RBP11.74□□□□□ -0.53
SMPD3-207ENST00000566466 MMP10P09238 476 aa11.74□□□□□ -0.53
SMPD3-207ENST00000566466 GCKRQ14397 625 aa11.74□□□□□ -0.53
SMPD3-207ENST00000566466 KAZALD1Q96I82 304 aa11.74□□□□□ -0.53
SMPD3-207ENST00000566466 NIP7Q9Y221 180 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMPD3-207ENST00000566466 SUPT16HQ9Y5B9 1047 aaKnown RBP11.74□□□□□ -0.53
SMPD3-207ENST00000566466 UTYO14607 1347 aa11.74□□□□□ -0.53
SMPD3-207ENST00000566466 LAMB2P55268 1798 aa11.74□□□□□ -0.53
SMPD3-207ENST00000566466 RIC1Q4ADV7 1423 aa11.73□□□□□ -0.53
SMPD3-207ENST00000566466 PRR5LQ6MZQ0 368 aa11.73□□□□□ -0.53
SMPD3-207ENST00000566466 BICDL1Q6ZP65 573 aa11.73□□□□□ -0.53
SMPD3-207ENST00000566466 C3orf67Q6ZVT6 689 aa11.73□□□□□ -0.53
SMPD3-207ENST00000566466 NLGN1Q8N2Q7 840 aa11.73□□□□□ -0.53
SMPD3-207ENST00000566466 USP44Q9H0E7 712 aa11.73□□□□□ -0.53
SMPD3-207ENST00000566466 KIF13BQ9NQT8 1826 aa11.73□□□□□ -0.53
SMPD3-207ENST00000566466 COL11A2P13942 1736 aaPredicted RBP11.72□□□□□ -0.53
SMPD3-207ENST00000566466 LRP5O75197 1615 aa11.72□□□□□ -0.53
SMPD3-207ENST00000566466 H7C1W4 665 aa11.72□□□□□ -0.53
SMPD3-207ENST00000566466 SERPINB2P05120 415 aa11.72□□□□□ -0.53
SMPD3-207ENST00000566466 HSP90AB3PQ58FF7 597 aa11.72□□□□□ -0.53
SMPD3-207ENST00000566466 DZIP1LQ8IYY4 767 aaKnown RBP11.72□□□□□ -0.53
SMPD3-207ENST00000566466 CCDC191Q8NCU4 936 aa11.72□□□□□ -0.53
SMPD3-207ENST00000566466 JARID2Q92833 1246 aaPredicted RBP11.72□□□□□ -0.53
SMPD3-207ENST00000566466 ARXQ96QS3 562 aa11.72□□□□□ -0.53
SMPD3-207ENST00000566466 ZNF652Q9Y2D9 606 aa11.72□□□□□ -0.53
SMPD3-207ENST00000566466 IPO8O15397 1037 aaKnown RBP11.71□□□□□ -0.53
SMPD3-207ENST00000566466 ALDH1L1O75891 902 aa11.71□□□□□ -0.53
SMPD3-207ENST00000566466 NBPF7P0C2Y1 421 aaPredicted RBP11.71□□□□□ -0.53
SMPD3-207ENST00000566466 PDE3AQ14432 1141 aa11.71□□□□□ -0.53
SMPD3-207ENST00000566466 PARP10Q53GL7 1025 aa11.71□□□□□ -0.53
SMPD3-207ENST00000566466 EPHA10Q5JZY3 1008 aa11.71□□□□□ -0.53
SMPD3-207ENST00000566466 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.53
SMPD3-207ENST00000566466 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
SMPD3-207ENST00000566466 CCDC24Q8N4L8 307 aa11.71□□□□□ -0.53
SMPD3-207ENST00000566466 MEIS3Q99687 375 aa11.71□□□□□ -0.53
SMPD3-207ENST00000566466 ZBTB7BO15156 539 aaPredicted RBP11.7□□□□□ -0.54
SMPD3-207ENST00000566466 PCCAP05165 728 aaPredicted RBP11.7□□□□□ -0.54
SMPD3-207ENST00000566466 CCT4P50991 539 aaKnown RBP11.7□□□□□ -0.54
SMPD3-207ENST00000566466 ERFEQ4G0M1 354 aa11.7□□□□□ -0.54
SMPD3-207ENST00000566466 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
SMPD3-207ENST00000566466 SRCIN1Q9C0H9 1055 aa11.7□□□□□ -0.54
SMPD3-207ENST00000566466 CWC25Q9NXE8 425 aaPredicted RBP11.7□□□□□ -0.54
SMPD3-207ENST00000566466 COG6Q9Y2V7 657 aa11.7□□□□□ -0.54
SMPD3-207ENST00000566466 CDHR2Q9BYE9 1310 aa11.69□□□□□ -0.54
SMPD3-207ENST00000566466 KLRG2A4D1S0 409 aaPredicted RBP11.69□□□□□ -0.54
SMPD3-207ENST00000566466 GRM8O00222 908 aa11.69□□□□□ -0.54
SMPD3-207ENST00000566466 MVPQ14764 893 aaKnown RBP11.69□□□□□ -0.54
SMPD3-207ENST00000566466 SLC10A5Q5PT55 438 aa11.69□□□□□ -0.54
SMPD3-207ENST00000566466 SLC51AQ86UW1 340 aa11.69□□□□□ -0.54
SMPD3-207ENST00000566466 ZBTB38Q8NAP3 1195 aaPredicted RBP11.69□□□□□ -0.54
SMPD3-207ENST00000566466 SUCLG2Q96I99 432 aa11.69□□□□□ -0.54
SMPD3-207ENST00000566466 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
SMPD3-207ENST00000566466 FAM177BA6PVY3 158 aa11.68□□□□□ -0.54
SMPD3-207ENST00000566466 FOXO4P98177 505 aa11.68□□□□□ -0.54
SMPD3-207ENST00000566466 UBE3BQ7Z3V4 1068 aa11.68□□□□□ -0.54
SMPD3-207ENST00000566466 NPM2Q86SE8 214 aaKnown RBP11.68□□□□□ -0.54
SMPD3-207ENST00000566466 ANKRD44Q8N8A2 993 aa11.68□□□□□ -0.54
SMPD3-207ENST00000566466 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
SMPD3-207ENST00000566466 UTP14AQ9BVJ6 771 aaKnown RBP11.68□□□□□ -0.54
SMPD3-207ENST00000566466 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
SMPD3-207ENST00000566466 SH3TC1Q8TE82 1336 aa11.67□□□□□ -0.54
SMPD3-207ENST00000566466 SRCAPQ6ZRS2 3230 aa11.67□□□□□ -0.54
SMPD3-207ENST00000566466 NEXNQ0ZGT2 675 aa11.67□□□□□ -0.54
SMPD3-207ENST00000566466 CRY2Q49AN0 593 aa11.67□□□□□ -0.54
SMPD3-207ENST00000566466 RTL5Q5HYW3 569 aaPredicted RBP11.67□□□□□ -0.54
SMPD3-207ENST00000566466 NBPF5PQ86XG9 351 aaPredicted RBP11.67□□□□□ -0.54
SMPD3-207ENST00000566466 CNBD1Q8NA66 436 aa11.67□□□□□ -0.54
SMPD3-207ENST00000566466 TRMT112Q9UI30 125 aaKnown RBP11.67□□□□□ -0.54
SMPD3-207ENST00000566466 DLEC1Q9Y238 1755 aa11.67□□□□□ -0.54
SMPD3-207ENST00000566466 HCLS1P14317 486 aaPredicted RBP11.66□□□□□ -0.54
SMPD3-207ENST00000566466 RABL6Q3YEC7 729 aaPredicted RBP11.66□□□□□ -0.54
SMPD3-207ENST00000566466 PPP1R42Q7Z4L9 355 aa11.66□□□□□ -0.54
SMPD3-207ENST00000566466 ITPRIPQ8IWB1 547 aa11.66□□□□□ -0.54
SMPD3-207ENST00000566466 FTSJ3Q8IY81 847 aaKnown RBP11.66□□□□□ -0.54
SMPD3-207ENST00000566466 SPON1Q9HCB6 807 aa11.66□□□□□ -0.54
SMPD3-207ENST00000566466 ZBTB40Q9NUA8 1239 aa11.66□□□□□ -0.54
SMPD3-207ENST00000566466 PARP3Q9Y6F1 533 aa11.66□□□□□ -0.54
SMPD3-207ENST00000566466 IRS4O14654 1257 aaPredicted RBP11.65□□□□□ -0.54
SMPD3-207ENST00000566466 CSF1RP07333 972 aa11.65□□□□□ -0.54
SMPD3-207ENST00000566466 KCNA3P22001 575 aa11.65□□□□□ -0.54
SMPD3-207ENST00000566466 IRX6P78412 446 aaPredicted RBP11.65□□□□□ -0.54
SMPD3-207ENST00000566466 EXOC6Q8TAG9 804 aa11.65□□□□□ -0.54
SMPD3-207ENST00000566466 SNED1Q8TER0 1413 aa11.65□□□□□ -0.54
SMPD3-207ENST00000566466 BRCA1P38398 1863 aaKnown RBP11.64□□□□□ -0.55
SMPD3-207ENST00000566466 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
SMPD3-207ENST00000566466 RFX5P48382 616 aaPredicted RBP11.64□□□□□ -0.55
SMPD3-207ENST00000566466 CTSWP56202 376 aa11.64□□□□□ -0.55
SMPD3-207ENST00000566466 SF3B3Q15393 1217 aaKnown RBP11.64□□□□□ -0.55
SMPD3-207ENST00000566466 TPTE2Q6XPS3 522 aa11.64□□□□□ -0.55
SMPD3-207ENST00000566466 SIRT2Q8IXJ6 389 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms