RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 ZC3H6P61129 1189 aaKnown RBP11.17□□□□□ -0.62
BBS4-210ENST00000566400 PDRG1Q9NUG6 133 aa11.17□□□□□ -0.62
BBS4-210ENST00000566400 PKD1L3Q7Z443 1732 aa11.17□□□□□ -0.62
BBS4-210ENST00000566400 PARP4Q9UKK3 1724 aaKnown RBP11.17□□□□□ -0.62
BBS4-210ENST00000566400 ZSCAN22P10073 491 aaPredicted RBP11.16□□□□□ -0.62
BBS4-210ENST00000566400 PDCP20941 246 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 MSNP26038 577 aaKnown RBP11.16□□□□□ -0.62
BBS4-210ENST00000566400 KCNJ4P48050 445 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 AIMP1Q12904 312 aaKnown RBP11.16□□□□□ -0.62
BBS4-210ENST00000566400 KRT32Q14532 448 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 NECTIN1Q15223 517 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 RUFY3Q7L099 469 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 ZSCAN30Q86W11 494 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 MAP4K1Q92918 833 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 XIRP1Q702N8 1843 aaKnown RBP11.16□□□□□ -0.62
BBS4-210ENST00000566400 STX6O43752 255 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 SASH1O94885 1247 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 IGKV5-2P06315 115 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 MCM5P33992 734 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 COPS6Q7L5N1 327 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 NFATC2IPQ8NCF5 419 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 XAGE3Q8WTP9 111 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 IL25Q9H293 177 aa11.16□□□□□ -0.62
BBS4-210ENST00000566400 COL18A1P39060 1754 aa11.15□□□□□ -0.62
BBS4-210ENST00000566400 RGPD5Q99666 1765 aa11.15□□□□□ -0.62
BBS4-210ENST00000566400 PIP4K2BP78356 416 aa11.15□□□□□ -0.62
BBS4-210ENST00000566400 UVSSAQ2YD98 709 aa11.15□□□□□ -0.62
BBS4-210ENST00000566400 TSGA10IPQ3SY00 556 aa11.15□□□□□ -0.62
BBS4-210ENST00000566400 NOL8Q76FK4 1167 aaKnown RBP11.15□□□□□ -0.62
BBS4-210ENST00000566400 JAKMIP1Q96N16 626 aaKnown RBP11.15□□□□□ -0.62
BBS4-210ENST00000566400 FSD1Q9BTV5 496 aa11.15□□□□□ -0.62
BBS4-210ENST00000566400 PA2G4Q9UQ80 394 aaKnown RBP11.15□□□□□ -0.62
BBS4-210ENST00000566400 TMEM94Q12767 1356 aa11.15□□□□□ -0.62
BBS4-210ENST00000566400 ATP5JP18859 108 aa11.15□□□□□ -0.63
BBS4-210ENST00000566400 PRIM1P49642 420 aaKnown RBP11.15□□□□□ -0.63
BBS4-210ENST00000566400 CABP4P57796 275 aa11.15□□□□□ -0.63
BBS4-210ENST00000566400 UBE2HP62256 183 aa11.15□□□□□ -0.63
BBS4-210ENST00000566400 RABL6Q3YEC7 729 aaPredicted RBP11.15□□□□□ -0.63
BBS4-210ENST00000566400 RASEFQ8IZ41 740 aa11.15□□□□□ -0.63
BBS4-210ENST00000566400 PLBD2Q8NHP8 589 aa11.15□□□□□ -0.63
BBS4-210ENST00000566400 EAF2Q96CJ1 260 aaPredicted RBP11.15□□□□□ -0.63
BBS4-210ENST00000566400 KAZALD1Q96I82 304 aa11.15□□□□□ -0.63
BBS4-210ENST00000566400 PDLIM2Q96JY6 352 aa11.15□□□□□ -0.63
BBS4-210ENST00000566400 MYD88Q99836 296 aa11.15□□□□□ -0.63
BBS4-210ENST00000566400 TSPY26PQ9H489 355 aa11.15□□□□□ -0.63
BBS4-210ENST00000566400 TMEM63CQ9P1W3 806 aa11.15□□□□□ -0.63
BBS4-210ENST00000566400 LAMB4A4D0S4 1761 aa11.14□□□□□ -0.63
BBS4-210ENST00000566400 MEGF6O75095 1541 aa11.14□□□□□ -0.63
BBS4-210ENST00000566400 C5P01031 1676 aa11.14□□□□□ -0.63
BBS4-210ENST00000566400 CREB3L3Q68CJ9 461 aa11.14□□□□□ -0.63
BBS4-210ENST00000566400 PRPF40BQ6NWY9 871 aaKnown RBP11.14□□□□□ -0.63
BBS4-210ENST00000566400 CHMP4CQ96CF2 233 aa11.14□□□□□ -0.63
BBS4-210ENST00000566400 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
BBS4-210ENST00000566400 RBM8AQ9Y5S9 174 aaKnown RBP11.14□□□□□ -0.63
BBS4-210ENST00000566400 SYCE3A1L190 88 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 PRAMEF22A3QJZ6 481 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 F13A1P00488 732 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 MYL6BP14649 208 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 CCDC183Q5T5S1 534 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 ZNF496Q96IT1 587 aaPredicted RBP11.13□□□□□ -0.63
BBS4-210ENST00000566400 RBSNQ9H1K0 784 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 SPATA31A3Q5VYP0 1347 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 PCDH11XQ9BZA7 1347 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 PCDH11YQ9BZA8 1340 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 RPAP1Q9BWH6 1393 aaPredicted RBP11.13□□□□□ -0.63
BBS4-210ENST00000566400 JCADQ9P266 1359 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 SYT1P21579 422 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 SLC39A6Q13433 755 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 BLOC1S2Q6QNY1 142 aa11.13□□□□□ -0.63
BBS4-210ENST00000566400 MED23Q9ULK4 1368 aa11.12□□□□□ -0.63
BBS4-210ENST00000566400 ERVV-2B6SEH9 535 aa11.12□□□□□ -0.63
BBS4-210ENST00000566400 PTH1RQ03431 593 aa11.12□□□□□ -0.63
BBS4-210ENST00000566400 NMIQ13287 307 aaPredicted RBP11.12□□□□□ -0.63
BBS4-210ENST00000566400 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
BBS4-210ENST00000566400 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
BBS4-210ENST00000566400 GPR108Q9NPR9 543 aa11.12□□□□□ -0.63
BBS4-210ENST00000566400 CCDC39Q9UFE4 941 aa11.12□□□□□ -0.63
BBS4-210ENST00000566400 GJB2P29033 226 aa11.12□□□□□ -0.63
BBS4-210ENST00000566400 TNNI3KQ59H18 835 aa11.12□□□□□ -0.63
BBS4-210ENST00000566400 FOXD4L5Q5VV16 416 aaPredicted RBP11.12□□□□□ -0.63
BBS4-210ENST00000566400 LRP10Q7Z4F1 713 aa11.12□□□□□ -0.63
BBS4-210ENST00000566400 FOXD4L4Q8WXT5 416 aaPredicted RBP11.12□□□□□ -0.63
BBS4-210ENST00000566400 U3KPZ7 1027 aaPredicted RBP11.12□□□□□ -0.63
BBS4-210ENST00000566400 FPGT-TNNI3KV9GXZ4 949 aa11.12□□□□□ -0.63
BBS4-210ENST00000566400 SLC27A2O14975 620 aa11.11□□□□□ -0.63
BBS4-210ENST00000566400 HMGB1P09429 215 aaKnown RBP11.11□□□□□ -0.63
BBS4-210ENST00000566400 LRRFIP1Q32MZ4 808 aaKnown RBP11.11□□□□□ -0.63
BBS4-210ENST00000566400 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
BBS4-210ENST00000566400 BOLA2Q9H3K6 86 aa11.11□□□□□ -0.63
BBS4-210ENST00000566400 ATG3Q9NT62 314 aa11.11□□□□□ -0.63
BBS4-210ENST00000566400 RBM27Q9P2N5 1060 aaKnown RBP11.11□□□□□ -0.63
BBS4-210ENST00000566400 NOL7Q9UMY1 257 aaKnown RBP11.11□□□□□ -0.63
BBS4-210ENST00000566400 A0A087WZG4 1122 aa11.1□□□□□ -0.63
BBS4-210ENST00000566400 CYP27B1O15528 508 aa11.1□□□□□ -0.63
BBS4-210ENST00000566400 RFX5P48382 616 aaPredicted RBP11.1□□□□□ -0.63
BBS4-210ENST00000566400 PTPN12Q05209 780 aaKnown RBP11.1□□□□□ -0.63
BBS4-210ENST00000566400 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.1□□□□□ -0.63
BBS4-210ENST00000566400 SIL1Q9H173 461 aa11.1□□□□□ -0.63
BBS4-210ENST00000566400 USP16Q9Y5T5 823 aa11.1□□□□□ -0.63
BBS4-210ENST00000566400 RPS6KB1P23443 525 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms