RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 MYD88Q99836 296 aa10.41□□□□□ -0.74
CDH13-208ENST00000566333 LRRC37AA6NMS7 1700 aa10.41□□□□□ -0.74
CDH13-208ENST00000566333 UTRNP46939 3433 aa10.4□□□□□ -0.74
CDH13-208ENST00000566333 NEURL1BA8MQ27 555 aa10.4□□□□□ -0.74
CDH13-208ENST00000566333 ATP5J2-PTCD1G3V325 749 aa10.4□□□□□ -0.74
CDH13-208ENST00000566333 SERPINB2P05120 415 aa10.4□□□□□ -0.74
CDH13-208ENST00000566333 POLD1P28340 1107 aa10.4□□□□□ -0.74
CDH13-208ENST00000566333 TRIM28Q13263 835 aaKnown RBP10.4□□□□□ -0.74
CDH13-208ENST00000566333 BEND3Q5T5X7 828 aa10.4□□□□□ -0.74
CDH13-208ENST00000566333 SUSD4Q5VX71 490 aa10.4□□□□□ -0.74
CDH13-208ENST00000566333 ARHGAP45Q92619 1136 aa10.4□□□□□ -0.74
CDH13-208ENST00000566333 SETDB2Q96T68 719 aa10.4□□□□□ -0.74
CDH13-208ENST00000566333 RNF123Q5XPI4 1314 aa10.39□□□□□ -0.75
CDH13-208ENST00000566333 RLBP1P12271 317 aa10.39□□□□□ -0.75
CDH13-208ENST00000566333 PARP10Q53GL7 1025 aa10.39□□□□□ -0.75
CDH13-208ENST00000566333 ATF7IPQ6VMQ6 1270 aa10.39□□□□□ -0.75
CDH13-208ENST00000566333 CNBD1Q8NA66 436 aa10.39□□□□□ -0.75
CDH13-208ENST00000566333 LINS1Q8NG48 757 aa10.39□□□□□ -0.75
CDH13-208ENST00000566333 PARP3Q9Y6F1 533 aa10.39□□□□□ -0.75
CDH13-208ENST00000566333 SLX4Q8IY92 1834 aa10.39□□□□□ -0.75
CDH13-208ENST00000566333 ZKSCAN2Q63HK3 967 aa10.38□□□□□ -0.75
CDH13-208ENST00000566333 NBPF5PQ86XG9 351 aaPredicted RBP10.38□□□□□ -0.75
CDH13-208ENST00000566333 NUTM1Q86Y26 1132 aa10.38□□□□□ -0.75
CDH13-208ENST00000566333 SYNE4Q8N205 404 aa10.38□□□□□ -0.75
CDH13-208ENST00000566333 CCDC191Q8NCU4 936 aa10.38□□□□□ -0.75
CDH13-208ENST00000566333 FRAT1Q92837 279 aaPredicted RBP10.38□□□□□ -0.75
CDH13-208ENST00000566333 API5Q9BZZ5 524 aaKnown RBP10.38□□□□□ -0.75
CDH13-208ENST00000566333 LTBP1Q14766 1721 aa10.38□□□□□ -0.75
CDH13-208ENST00000566333 FAM177BA6PVY3 158 aa10.37□□□□□ -0.75
CDH13-208ENST00000566333 CASP7P55210 303 aa10.37□□□□□ -0.75
CDH13-208ENST00000566333 NEXNQ0ZGT2 675 aa10.37□□□□□ -0.75
CDH13-208ENST00000566333 GCKRQ14397 625 aa10.37□□□□□ -0.75
CDH13-208ENST00000566333 ERFEQ4G0M1 354 aa10.37□□□□□ -0.75
CDH13-208ENST00000566333 SLC4A10Q6U841 1118 aa10.37□□□□□ -0.75
CDH13-208ENST00000566333 CCDC24Q8N4L8 307 aa10.37□□□□□ -0.75
CDH13-208ENST00000566333 UTP14AQ9BVJ6 771 aaKnown RBP10.37□□□□□ -0.75
CDH13-208ENST00000566333 CWC25Q9NXE8 425 aaPredicted RBP10.37□□□□□ -0.75
CDH13-208ENST00000566333 SH3TC1Q8TE82 1336 aa10.36□□□□□ -0.75
CDH13-208ENST00000566333 PLIN1O60240 522 aa10.36□□□□□ -0.75
CDH13-208ENST00000566333 ALDH1L1O75891 902 aa10.36□□□□□ -0.75
CDH13-208ENST00000566333 PCCAP05165 728 aaPredicted RBP10.36□□□□□ -0.75
CDH13-208ENST00000566333 INTS3Q68E01 1043 aaKnown RBP10.36□□□□□ -0.75
CDH13-208ENST00000566333 C3orf67Q6ZVT6 689 aa10.36□□□□□ -0.75
CDH13-208ENST00000566333 PPP1R42Q7Z4L9 355 aa10.36□□□□□ -0.75
CDH13-208ENST00000566333 ZBTB38Q8NAP3 1195 aaPredicted RBP10.36□□□□□ -0.75
CDH13-208ENST00000566333 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
CDH13-208ENST00000566333 FHDC1Q9C0D6 1143 aaPredicted RBP10.36□□□□□ -0.75
CDH13-208ENST00000566333 SRCIN1Q9C0H9 1055 aa10.36□□□□□ -0.75
CDH13-208ENST00000566333 NYXQ9GZU5 481 aa10.36□□□□□ -0.75
CDH13-208ENST00000566333 TRMT112Q9UI30 125 aaKnown RBP10.36□□□□□ -0.75
CDH13-208ENST00000566333 FER1L6Q2WGJ9 1857 aa10.36□□□□□ -0.75
CDH13-208ENST00000566333 UTYO14607 1347 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 CDHR2Q9BYE9 1310 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 H7C1W4 665 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
CDH13-208ENST00000566333 RRP1P56182 461 aaKnown RBP10.35□□□□□ -0.75
CDH13-208ENST00000566333 ST5P78524 1137 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 CRY2Q49AN0 593 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 C20orf194Q5TEA3 1177 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 TPTE2Q6XPS3 522 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 UBE3BQ7Z3V4 1068 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 TMEM57Q8N5G2 664 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 NLGN2Q8NFZ4 835 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 CNKSR2Q8WXI2 1034 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 FAM89AQ96GI7 184 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 CD2APQ9Y5K6 639 aa10.35□□□□□ -0.75
CDH13-208ENST00000566333 KLRG2A4D1S0 409 aaPredicted RBP10.34□□□□□ -0.75
CDH13-208ENST00000566333 GRM8O00222 908 aa10.34□□□□□ -0.75
CDH13-208ENST00000566333 CCT4P50991 539 aaKnown RBP10.34□□□□□ -0.75
CDH13-208ENST00000566333 RTL5Q5HYW3 569 aaPredicted RBP10.34□□□□□ -0.75
CDH13-208ENST00000566333 PANK1Q8TE04 598 aa10.34□□□□□ -0.75
CDH13-208ENST00000566333 JARID2Q92833 1246 aaPredicted RBP10.34□□□□□ -0.75
CDH13-208ENST00000566333 BRIP1Q9BX63 1249 aa10.34□□□□□ -0.75
CDH13-208ENST00000566333 IRS4O14654 1257 aaPredicted RBP10.33□□□□□ -0.76
CDH13-208ENST00000566333 NBPF7P0C2Y1 421 aaPredicted RBP10.33□□□□□ -0.76
CDH13-208ENST00000566333 HCLS1P14317 486 aaPredicted RBP10.33□□□□□ -0.76
CDH13-208ENST00000566333 KCNA3P22001 575 aa10.33□□□□□ -0.76
CDH13-208ENST00000566333 SLC10A5Q5PT55 438 aa10.33□□□□□ -0.76
CDH13-208ENST00000566333 FTSJ3Q8IY81 847 aaKnown RBP10.33□□□□□ -0.76
CDH13-208ENST00000566333 DZIP1LQ8IYY4 767 aaKnown RBP10.33□□□□□ -0.76
CDH13-208ENST00000566333 KAZALD1Q96I82 304 aa10.33□□□□□ -0.76
CDH13-208ENST00000566333 MEIS3Q99687 375 aa10.33□□□□□ -0.76
CDH13-208ENST00000566333 USP44Q9H0E7 712 aa10.33□□□□□ -0.76
CDH13-208ENST00000566333 PPP1R1BQ9UD71 204 aaPredicted RBP10.33□□□□□ -0.76
CDH13-208ENST00000566333 SNED1Q8TER0 1413 aa10.33□□□□□ -0.76
CDH13-208ENST00000566333 SBF1O95248 1867 aa10.32□□□□□ -0.76
CDH13-208ENST00000566333 CCDC88AQ3V6T2 1871 aa10.32□□□□□ -0.76
CDH13-208ENST00000566333 DUOX1Q9NRD9 1551 aa10.32□□□□□ -0.76
CDH13-208ENST00000566333 CHRNA5P30532 468 aa10.32□□□□□ -0.76
CDH13-208ENST00000566333 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
CDH13-208ENST00000566333 SYT17Q9BSW7 474 aa10.32□□□□□ -0.76
CDH13-208ENST00000566333 PLA2G12BQ9BX93 195 aa10.32□□□□□ -0.76
CDH13-208ENST00000566333 RTL9Q8NET4 1388 aa10.31□□□□□ -0.76
CDH13-208ENST00000566333 NPHP1O15259 732 aa10.31□□□□□ -0.76
CDH13-208ENST00000566333 SRGNP10124 158 aa10.31□□□□□ -0.76
CDH13-208ENST00000566333 DPEP1P16444 411 aa10.31□□□□□ -0.76
CDH13-208ENST00000566333 PDE6BP35913 854 aa10.31□□□□□ -0.76
CDH13-208ENST00000566333 CTSWP56202 376 aa10.31□□□□□ -0.76
CDH13-208ENST00000566333 TGFB2P61812 414 aa10.31□□□□□ -0.76
CDH13-208ENST00000566333 FOXO4P98177 505 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms