RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 RTCBQ9Y3I0 505 aaKnown RBP20.93■□□□□ 0.94
RAB40C-210ENST00000566290 SLC34A2O95436 690 aa20.92■□□□□ 0.94
RAB40C-210ENST00000566290 GNAI2P04899 355 aa20.92■□□□□ 0.94
RAB40C-210ENST00000566290 TTC5Q8N0Z6 440 aa20.92■□□□□ 0.94
RAB40C-210ENST00000566290 ALDH1L1O75891 902 aa20.91■□□□□ 0.94
RAB40C-210ENST00000566290 DPEP1P16444 411 aa20.91■□□□□ 0.94
RAB40C-210ENST00000566290 TRAPPC3LQ5T215 181 aa20.91■□□□□ 0.94
RAB40C-210ENST00000566290 DNAAF4Q8WXU2 420 aa20.91■□□□□ 0.94
RAB40C-210ENST00000566290 FMNL2Q96PY5 1086 aa20.91■□□□□ 0.94
RAB40C-210ENST00000566290 KIF13BQ9NQT8 1826 aa20.91■□□□□ 0.94
RAB40C-210ENST00000566290 HDAC5Q9UQL6 1122 aa20.91■□□□□ 0.94
RAB40C-210ENST00000566290 F6X3S4 739 aa20.9■□□□□ 0.94
RAB40C-210ENST00000566290 SNRPA1P09661 255 aaKnown RBP20.9■□□□□ 0.94
RAB40C-210ENST00000566290 VSIG10Q8N0Z9 540 aa20.9■□□□□ 0.94
RAB40C-210ENST00000566290 SRCIN1Q9C0H9 1055 aa20.9■□□□□ 0.94
RAB40C-210ENST00000566290 C4AP0C0L4 1744 aa20.9■□□□□ 0.94
RAB40C-210ENST00000566290 CCDC87Q9NVE4 849 aa20.89■□□□□ 0.93
RAB40C-210ENST00000566290 ZBTB1Q9Y2K1 713 aa20.89■□□□□ 0.93
RAB40C-210ENST00000566290 PRAMEF22A3QJZ6 481 aa20.88■□□□□ 0.93
RAB40C-210ENST00000566290 DDX58O95786 925 aaKnown RBP20.88■□□□□ 0.93
RAB40C-210ENST00000566290 BMP2KLQ5H9B9 411 aa20.88■□□□□ 0.93
RAB40C-210ENST00000566290 BEND3Q5T5X7 828 aa20.88■□□□□ 0.93
RAB40C-210ENST00000566290 SLC4A10Q6U841 1118 aa20.88■□□□□ 0.93
RAB40C-210ENST00000566290 KSR2Q6VAB6 950 aa20.88■□□□□ 0.93
RAB40C-210ENST00000566290 C1orf115Q9H7X2 142 aa20.88■□□□□ 0.93
RAB40C-210ENST00000566290 PHAXQ9H814 394 aaKnown RBP20.88■□□□□ 0.93
RAB40C-210ENST00000566290 SRP68Q9UHB9 627 aaKnown RBP20.88■□□□□ 0.93
RAB40C-210ENST00000566290 EIF2S2P20042 333 aaKnown RBP20.87■□□□□ 0.93
RAB40C-210ENST00000566290 PDIA6Q15084 440 aa20.87■□□□□ 0.93
RAB40C-210ENST00000566290 EIF5BO60841 1220 aaKnown RBP20.86■□□□□ 0.93
RAB40C-210ENST00000566290 GYS1P13807 737 aa20.86■□□□□ 0.93
RAB40C-210ENST00000566290 ADRA2BP18089 450 aa20.86■□□□□ 0.93
RAB40C-210ENST00000566290 USP44Q9H0E7 712 aa20.86■□□□□ 0.93
RAB40C-210ENST00000566290 COL15A1P39059 1388 aa20.85■□□□□ 0.93
RAB40C-210ENST00000566290 UTYO14607 1347 aa20.85■□□□□ 0.93
RAB40C-210ENST00000566290 KCNA3P22001 575 aa20.85■□□□□ 0.93
RAB40C-210ENST00000566290 RFC4P35249 363 aa20.85■□□□□ 0.93
RAB40C-210ENST00000566290 MTX1Q13505 466 aa20.85■□□□□ 0.93
RAB40C-210ENST00000566290 SMC1BQ8NDV3 1235 aa20.85■□□□□ 0.93
RAB40C-210ENST00000566290 IPO9Q96P70 1041 aaKnown RBP20.85■□□□□ 0.93
RAB40C-210ENST00000566290 C10orf71Q711Q0 1435 aa20.85■□□□□ 0.93
RAB40C-210ENST00000566290 PI4KAP2A4QPH2 592 aa20.84■□□□□ 0.93
RAB40C-210ENST00000566290 UBTFL1P0CB47 393 aaPredicted RBP20.84■□□□□ 0.93
RAB40C-210ENST00000566290 ATP8B2P98198 1209 aa20.84■□□□□ 0.93
RAB40C-210ENST00000566290 LRP10Q7Z4F1 713 aa20.84■□□□□ 0.93
RAB40C-210ENST00000566290 PI4KAP1Q8N8J0 262 aa20.84■□□□□ 0.93
RAB40C-210ENST00000566290 USP16Q9Y5T5 823 aa20.84■□□□□ 0.93
RAB40C-210ENST00000566290 LINS1Q8NG48 757 aa20.83■□□□□ 0.93
RAB40C-210ENST00000566290 NECTIN2Q92692 538 aa20.83■□□□□ 0.93
RAB40C-210ENST00000566290 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.93
RAB40C-210ENST00000566290 RNF181Q9P0P0 153 aa20.83■□□□□ 0.93
RAB40C-210ENST00000566290 BRCA1P38398 1863 aaKnown RBP20.83■□□□□ 0.92
RAB40C-210ENST00000566290 ARFGEF2Q9Y6D5 1785 aa20.82■□□□□ 0.92
RAB40C-210ENST00000566290 USP42Q9H9J4 1324 aaKnown RBP20.82■□□□□ 0.92
RAB40C-210ENST00000566290 A1BGP04217 495 aa20.82■□□□□ 0.92
RAB40C-210ENST00000566290 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
RAB40C-210ENST00000566290 SSH3Q8TE77 659 aa20.82■□□□□ 0.92
RAB40C-210ENST00000566290 LNPKQ9C0E8 428 aa20.82■□□□□ 0.92
RAB40C-210ENST00000566290 STARD3NLO95772 234 aa20.81■□□□□ 0.92
RAB40C-210ENST00000566290 PIP4K2AP48426 406 aaPredicted RBP20.81■□□□□ 0.92
RAB40C-210ENST00000566290 POLA2Q14181 598 aa20.8■□□□□ 0.92
RAB40C-210ENST00000566290 USPL1Q5W0Q7 1092 aa20.8■□□□□ 0.92
RAB40C-210ENST00000566290 NLGN1Q8N2Q7 840 aa20.8■□□□□ 0.92
RAB40C-210ENST00000566290 EIF5P55010 431 aaKnown RBP20.79■□□□□ 0.92
RAB40C-210ENST00000566290 PROSER3Q2NL68 480 aa20.79■□□□□ 0.92
RAB40C-210ENST00000566290 TEX13AQ9BXU3 409 aaPredicted RBP20.79■□□□□ 0.92
RAB40C-210ENST00000566290 OSBPL3Q9H4L5 887 aa20.79■□□□□ 0.92
RAB40C-210ENST00000566290 BCL2L12Q9HB09 334 aa20.79■□□□□ 0.92
RAB40C-210ENST00000566290 ARFGEF1Q9Y6D6 1849 aa20.78■□□□□ 0.92
RAB40C-210ENST00000566290 ZBTB47Q9UFB7 747 aaPredicted RBP20.78■□□□□ 0.92
RAB40C-210ENST00000566290 MAP3K2Q9Y2U5 619 aa20.78■□□□□ 0.92
RAB40C-210ENST00000566290 DDR1Q08345 913 aa20.77■□□□□ 0.92
RAB40C-210ENST00000566290 UPF2Q9HAU5 1272 aaKnown RBP20.77■□□□□ 0.92
RAB40C-210ENST00000566290 PIM2Q9P1W9 311 aa20.77■□□□□ 0.92
RAB40C-210ENST00000566290 NARFQ9UHQ1 456 aa20.77■□□□□ 0.92
RAB40C-210ENST00000566290 LRRFIP2Q9Y608 721 aaKnown RBP20.77■□□□□ 0.92
RAB40C-210ENST00000566290 AOX1Q06278 1338 aa20.77■□□□□ 0.91
RAB40C-210ENST00000566290 TNRC6CQ9HCJ0 1690 aaKnown RBP20.77■□□□□ 0.91
RAB40C-210ENST00000566290 SBF1O95248 1867 aa20.76■□□□□ 0.91
RAB40C-210ENST00000566290 RAB11FIP3O75154 756 aa20.76■□□□□ 0.91
RAB40C-210ENST00000566290 NBPF26B4DH59 902 aa20.75■□□□□ 0.91
RAB40C-210ENST00000566290 HSP90AB4PQ58FF6 505 aa20.75■□□□□ 0.91
RAB40C-210ENST00000566290 DALRD3Q5D0E6 543 aaKnown RBP20.75■□□□□ 0.91
RAB40C-210ENST00000566290 NBPF10Q6P3W6 841 aaKnown RBP20.75■□□□□ 0.91
RAB40C-210ENST00000566290 PLEKHM2Q8IWE5 1019 aa20.75■□□□□ 0.91
RAB40C-210ENST00000566290 NBPF15Q8N660 670 aa20.75■□□□□ 0.91
RAB40C-210ENST00000566290 METTL22Q9BUU2 404 aaPredicted RBP20.75■□□□□ 0.91
RAB40C-210ENST00000566290 ZNF330Q9Y3S2 320 aaPredicted RBP20.75■□□□□ 0.91
RAB40C-210ENST00000566290 PARP3Q9Y6F1 533 aa20.75■□□□□ 0.91
RAB40C-210ENST00000566290 SALL3Q9BXA9 1300 aa20.75■□□□□ 0.91
RAB40C-210ENST00000566290 ZPR1O75312 459 aa20.74■□□□□ 0.91
RAB40C-210ENST00000566290 TM4SF1P30408 202 aa20.74■□□□□ 0.91
RAB40C-210ENST00000566290 NEXNQ0ZGT2 675 aa20.74■□□□□ 0.91
RAB40C-210ENST00000566290 TBC1D2BQ9UPU7 963 aa20.74■□□□□ 0.91
RAB40C-210ENST00000566290 ANXA1P04083 346 aa20.73■□□□□ 0.91
RAB40C-210ENST00000566290 IL6STP40189 918 aaPredicted RBP20.73■□□□□ 0.91
RAB40C-210ENST00000566290 PLBD2Q8NHP8 589 aa20.73■□□□□ 0.91
RAB40C-210ENST00000566290 TBC1D32Q96NH3 1257 aa20.73■□□□□ 0.91
RAB40C-210ENST00000566290 NOP58Q9Y2X3 529 aaKnown RBP20.73■□□□□ 0.91
RAB40C-210ENST00000566290 PNMA6EA0A0J9YXQ4 647 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms