RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 LTBP3Q9NS15 1303 aa26.66■■□□□ 1.86
EDC3-209ENST00000566119 SLC10A5Q5PT55 438 aa26.66■■□□□ 1.86
EDC3-209ENST00000566119 OLFM4Q6UX06 510 aa26.66■■□□□ 1.86
EDC3-209ENST00000566119 HOXA10P31260 410 aaPredicted RBP26.65■■□□□ 1.86
EDC3-209ENST00000566119 CCDC93Q567U6 631 aa26.65■■□□□ 1.86
EDC3-209ENST00000566119 C3orf67Q6ZVT6 689 aa26.65■■□□□ 1.86
EDC3-209ENST00000566119 RPGRQ92834 1020 aaKnown RBP26.65■■□□□ 1.86
EDC3-209ENST00000566119 RRAGCQ9HB90 399 aa26.65■■□□□ 1.86
EDC3-209ENST00000566119 RIC1Q4ADV7 1423 aa26.65■■□□□ 1.86
EDC3-209ENST00000566119 SBF1O95248 1867 aa26.64■■□□□ 1.86
EDC3-209ENST00000566119 NCBP3Q53F19 620 aaKnown RBP26.64■■□□□ 1.86
EDC3-209ENST00000566119 TSR2Q969E8 191 aaKnown RBP26.64■■□□□ 1.86
EDC3-209ENST00000566119 NLRP3Q96P20 1036 aa26.64■■□□□ 1.86
EDC3-209ENST00000566119 GLTPD2A6NH11 291 aa26.63■■□□□ 1.85
EDC3-209ENST00000566119 TOMM70O94826 608 aa26.63■■□□□ 1.85
EDC3-209ENST00000566119 TSPYL6Q8N831 410 aa26.63■■□□□ 1.85
EDC3-209ENST00000566119 SYNE4Q8N205 404 aa26.62■■□□□ 1.85
EDC3-209ENST00000566119 PHAXQ9H814 394 aaKnown RBP26.62■■□□□ 1.85
EDC3-209ENST00000566119 TRMT112Q9UI30 125 aaKnown RBP26.62■■□□□ 1.85
EDC3-209ENST00000566119 TNRC6CQ9HCJ0 1690 aaKnown RBP26.61■■□□□ 1.85
EDC3-209ENST00000566119 RTKN2Q8IZC4 609 aa26.61■■□□□ 1.85
EDC3-209ENST00000566119 ZNF428Q96B54 188 aa26.61■■□□□ 1.85
EDC3-209ENST00000566119 RBM17Q96I25 401 aaKnown RBP26.61■■□□□ 1.85
EDC3-209ENST00000566119 CRAMP1Q96RY5 1269 aa26.61■■□□□ 1.85
EDC3-209ENST00000566119 SALL2Q9Y467 1007 aaPredicted RBP26.61■■□□□ 1.85
EDC3-209ENST00000566119 RNF123Q5XPI4 1314 aa26.61■■□□□ 1.85
EDC3-209ENST00000566119 FKBP4Q02790 459 aaKnown RBP eCLIP26.6■■□□□ 1.85
EDC3-209ENST00000566119 ISCA1Q9BUE6 129 aa26.6■■□□□ 1.85
EDC3-209ENST00000566119 ATP5J2-PTCD1G3V325 749 aa26.59■■□□□ 1.85
EDC3-209ENST00000566119 HCLS1P14317 486 aaPredicted RBP26.59■■□□□ 1.85
EDC3-209ENST00000566119 DPY19L2Q6NUT2 758 aa26.59■■□□□ 1.85
EDC3-209ENST00000566119 FAM9BQ8IZU0 186 aa26.59■■□□□ 1.85
EDC3-209ENST00000566119 CHMP4AQ9BY43 222 aa26.59■■□□□ 1.85
EDC3-209ENST00000566119 IL16Q14005 1332 aa26.59■■□□□ 1.85
EDC3-209ENST00000566119 CCDC30Q5VVM6 783 aa26.58■■□□□ 1.85
EDC3-209ENST00000566119 RIC3Q7Z5B4 369 aa26.58■■□□□ 1.85
EDC3-209ENST00000566119 C16orf71Q8IYS4 520 aaPredicted RBP26.58■■□□□ 1.85
EDC3-209ENST00000566119 SH3TC1Q8TE82 1336 aa26.58■■□□□ 1.85
EDC3-209ENST00000566119 FER1L6Q2WGJ9 1857 aa26.57■■□□□ 1.84
EDC3-209ENST00000566119 ZNF277Q9NRM2 450 aaPredicted RBP26.57■■□□□ 1.84
EDC3-209ENST00000566119 ARFGEF2Q9Y6D5 1785 aa26.56■■□□□ 1.84
EDC3-209ENST00000566119 GOLGA2Q08379 1002 aa26.56■■□□□ 1.84
EDC3-209ENST00000566119 TCERG1O14776 1098 aaKnown RBP26.55■■□□□ 1.84
EDC3-209ENST00000566119 VEGFAP15692 232 aaPredicted RBP26.55■■□□□ 1.84
EDC3-209ENST00000566119 HSPA6P17066 643 aa26.55■■□□□ 1.84
EDC3-209ENST00000566119 TRIM28Q13263 835 aaKnown RBP26.55■■□□□ 1.84
EDC3-209ENST00000566119 CC2D2BQ6DHV5 1058 aa26.55■■□□□ 1.84
EDC3-209ENST00000566119 PPEF1O14829 653 aaPredicted RBP26.54■■□□□ 1.84
EDC3-209ENST00000566119 WDR63Q8IWG1 891 aa26.54■■□□□ 1.84
EDC3-209ENST00000566119 RBM46Q8TBY0 533 aaKnown RBP26.54■■□□□ 1.84
EDC3-209ENST00000566119 FAM89AQ96GI7 184 aa26.54■■□□□ 1.84
EDC3-209ENST00000566119 CACNA1SQ13698 1873 aa26.53■■□□□ 1.84
EDC3-209ENST00000566119 TWISTNBQ3B726 338 aaPredicted RBP26.53■■□□□ 1.84
EDC3-209ENST00000566119 SLC51AQ86UW1 340 aa26.53■■□□□ 1.84
EDC3-209ENST00000566119 POTECB2RU33 542 aa26.52■■□□□ 1.84
EDC3-209ENST00000566119 PSMD1Q99460 953 aa26.52■■□□□ 1.84
EDC3-209ENST00000566119 DDNO94850 711 aaPredicted RBP26.51■■□□□ 1.83
EDC3-209ENST00000566119 SNED1Q8TER0 1413 aa26.5■■□□□ 1.83
EDC3-209ENST00000566119 ABCC4O15439 1325 aa26.5■■□□□ 1.83
EDC3-209ENST00000566119 IARSP41252 1262 aaKnown RBP26.5■■□□□ 1.83
EDC3-209ENST00000566119 GRIPAP1Q4V328 841 aa26.5■■□□□ 1.83
EDC3-209ENST00000566119 RTL5Q5HYW3 569 aaPredicted RBP26.5■■□□□ 1.83
EDC3-209ENST00000566119 MYD88Q99836 296 aa26.5■■□□□ 1.83
EDC3-209ENST00000566119 ATP6V0A2Q9Y487 856 aa26.5■■□□□ 1.83
EDC3-209ENST00000566119 CCDC88AQ3V6T2 1871 aa26.49■■□□□ 1.83
EDC3-209ENST00000566119 FANCIQ9NVI1 1328 aa26.49■■□□□ 1.83
EDC3-209ENST00000566119 BBOX1O75936 387 aa26.49■■□□□ 1.83
EDC3-209ENST00000566119 DDX58O95786 925 aaKnown RBP26.49■■□□□ 1.83
EDC3-209ENST00000566119 DDX46Q7L014 1031 aaKnown RBP26.49■■□□□ 1.83
EDC3-209ENST00000566119 STK31Q9BXU1 1019 aa26.49■■□□□ 1.83
EDC3-209ENST00000566119 CEP350Q5VT06 3117 aa26.49■■□□□ 1.83
EDC3-209ENST00000566119 ANKRD36CQ5JPF3 1778 aa26.48■■□□□ 1.83
EDC3-209ENST00000566119 TIAM2Q8IVF5 1701 aa26.48■■□□□ 1.83
EDC3-209ENST00000566119 METTL22Q9BUU2 404 aaPredicted RBP26.47■■□□□ 1.83
EDC3-209ENST00000566119 TMX4Q9H1E5 349 aaPredicted RBP26.47■■□□□ 1.83
EDC3-209ENST00000566119 SLC4A2P04920 1241 aa26.46■■□□□ 1.83
EDC3-209ENST00000566119 FSTL1Q12841 308 aa26.46■■□□□ 1.83
EDC3-209ENST00000566119 SF3B3Q15393 1217 aaKnown RBP26.46■■□□□ 1.83
EDC3-209ENST00000566119 SPINK5Q9NQ38 1064 aaPredicted RBP26.46■■□□□ 1.83
EDC3-209ENST00000566119 MAP3K2Q9Y2U5 619 aa26.46■■□□□ 1.83
EDC3-209ENST00000566119 PI4KAP2A4QPH2 592 aa26.45■■□□□ 1.82
EDC3-209ENST00000566119 IRS4O14654 1257 aaPredicted RBP26.45■■□□□ 1.82
EDC3-209ENST00000566119 GRAPQ13588 217 aa26.45■■□□□ 1.82
EDC3-209ENST00000566119 KSR2Q6VAB6 950 aa26.45■■□□□ 1.82
EDC3-209ENST00000566119 SP8Q8IXZ3 490 aa26.45■■□□□ 1.82
EDC3-209ENST00000566119 PI4KAP1Q8N8J0 262 aa26.45■■□□□ 1.82
EDC3-209ENST00000566119 ZBTB38Q8NAP3 1195 aaPredicted RBP26.45■■□□□ 1.82
EDC3-209ENST00000566119 CCDC191Q8NCU4 936 aa26.45■■□□□ 1.82
EDC3-209ENST00000566119 GRAPLQ8TC17 118 aaPredicted RBP26.45■■□□□ 1.82
EDC3-209ENST00000566119 FZD9O00144 591 aa26.44■■□□□ 1.82
EDC3-209ENST00000566119 VAMP4O75379 141 aa26.44■■□□□ 1.82
EDC3-209ENST00000566119 EXOSC9Q06265 439 aaKnown RBP26.44■■□□□ 1.82
EDC3-209ENST00000566119 G2E3Q7L622 706 aa26.44■■□□□ 1.82
EDC3-209ENST00000566119 JDP2Q8WYK2 163 aa26.44■■□□□ 1.82
EDC3-209ENST00000566119 ZNF541Q9H0D2 1346 aa26.43■■□□□ 1.82
EDC3-209ENST00000566119 SMC1BQ8NDV3 1235 aa26.43■■□□□ 1.82
EDC3-209ENST00000566119 CWC25Q9NXE8 425 aaPredicted RBP26.43■■□□□ 1.82
EDC3-209ENST00000566119 DICER1Q9UPY3 1922 aaKnown RBP26.43■■□□□ 1.82
EDC3-209ENST00000566119 PCCAP05165 728 aaPredicted RBP26.41■■□□□ 1.82
EDC3-209ENST00000566119 APLP1P51693 650 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms