RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 SNED1Q8TER0 1413 aa12.71□□□□□ -0.37
SMPD3-206ENST00000566009 A0A087WZG4 1122 aa12.71□□□□□ -0.37
SMPD3-206ENST00000566009 GMPSP49915 693 aaPredicted RBP12.71□□□□□ -0.37
SMPD3-206ENST00000566009 EIF5P55010 431 aaKnown RBP12.71□□□□□ -0.37
SMPD3-206ENST00000566009 RASAL3Q86YV0 1011 aa12.71□□□□□ -0.37
SMPD3-206ENST00000566009 KLRG2A4D1S0 409 aaPredicted RBP12.7□□□□□ -0.38
SMPD3-206ENST00000566009 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMPD3-206ENST00000566009 NIM1KQ8IY84 436 aa12.7□□□□□ -0.38
SMPD3-206ENST00000566009 STXBP5LQ9Y2K9 1186 aa12.7□□□□□ -0.38
SMPD3-206ENST00000566009 TRIM17Q9Y577 477 aa12.7□□□□□ -0.38
SMPD3-206ENST00000566009 PPM1GO15355 546 aaPredicted RBP12.69□□□□□ -0.38
SMPD3-206ENST00000566009 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
SMPD3-206ENST00000566009 CXCL9Q07325 125 aa12.69□□□□□ -0.38
SMPD3-206ENST00000566009 PUS7Q96PZ0 661 aaKnown RBP12.69□□□□□ -0.38
SMPD3-206ENST00000566009 TBC1D2BQ9UPU7 963 aa12.69□□□□□ -0.38
SMPD3-206ENST00000566009 RAB3GAP2Q9H2M9 1393 aa12.69□□□□□ -0.38
SMPD3-206ENST00000566009 NPC1L1Q9UHC9 1359 aa12.69□□□□□ -0.38
SMPD3-206ENST00000566009 PLEKHO1Q53GL0 409 aaPredicted RBP12.68□□□□□ -0.38
SMPD3-206ENST00000566009 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
SMPD3-206ENST00000566009 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
SMPD3-206ENST00000566009 OTOP1Q7RTM1 612 aa12.68□□□□□ -0.38
SMPD3-206ENST00000566009 KRT26Q7Z3Y9 468 aa12.68□□□□□ -0.38
SMPD3-206ENST00000566009 ARMC5Q96C12 935 aa12.68□□□□□ -0.38
SMPD3-206ENST00000566009 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
SMPD3-206ENST00000566009 R3HDMLQ9H3Y0 253 aa12.68□□□□□ -0.38
SMPD3-206ENST00000566009 ROCK2O75116 1388 aaKnown RBP12.68□□□□□ -0.38
SMPD3-206ENST00000566009 ERBB4Q15303 1308 aa12.67□□□□□ -0.38
SMPD3-206ENST00000566009 UNC80Q8N2C7 3258 aa12.67□□□□□ -0.38
SMPD3-206ENST00000566009 RANBP2P49792 3224 aaKnown RBP12.67□□□□□ -0.38
SMPD3-206ENST00000566009 PLA2G5P39877 138 aa12.67□□□□□ -0.38
SMPD3-206ENST00000566009 CC2D2BQ6DHV5 1058 aa12.67□□□□□ -0.38
SMPD3-206ENST00000566009 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
SMPD3-206ENST00000566009 BRCA2P51587 3418 aa12.66□□□□□ -0.38
SMPD3-206ENST00000566009 TM4SF4P48230 202 aa12.66□□□□□ -0.38
SMPD3-206ENST00000566009 BCL2L13Q9BXK5 485 aa12.66□□□□□ -0.38
SMPD3-206ENST00000566009 RAPGEFL1Q9UHV5 662 aa12.66□□□□□ -0.38
SMPD3-206ENST00000566009 CNOT7Q9UIV1 285 aaKnown RBP12.66□□□□□ -0.38
SMPD3-206ENST00000566009 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
SMPD3-206ENST00000566009 CDHR2Q9BYE9 1310 aa12.65□□□□□ -0.38
SMPD3-206ENST00000566009 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
SMPD3-206ENST00000566009 ADM5C9JUS6 153 aa12.65□□□□□ -0.38
SMPD3-206ENST00000566009 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
SMPD3-206ENST00000566009 NBPF5PQ86XG9 351 aaPredicted RBP12.65□□□□□ -0.38
SMPD3-206ENST00000566009 DEFB123Q8N688 67 aa12.65□□□□□ -0.38
SMPD3-206ENST00000566009 DPF3Q92784 378 aa12.65□□□□□ -0.38
SMPD3-206ENST00000566009 CFHR5Q9BXR6 569 aa12.65□□□□□ -0.38
SMPD3-206ENST00000566009 PTPN22Q9Y2R2 807 aa12.65□□□□□ -0.38
SMPD3-206ENST00000566009 A0A1W2PPC1 479 aa12.64□□□□□ -0.39
SMPD3-206ENST00000566009 PPIP5K2O43314 1243 aa12.64□□□□□ -0.39
SMPD3-206ENST00000566009 ZNRF3Q9ULT6 936 aa12.64□□□□□ -0.39
SMPD3-206ENST00000566009 ZNF330Q9Y3S2 320 aaPredicted RBP12.64□□□□□ -0.39
SMPD3-206ENST00000566009 HTTP42858 3142 aa12.64□□□□□ -0.39
SMPD3-206ENST00000566009 H7C1D1 291 aa12.63□□□□□ -0.39
SMPD3-206ENST00000566009 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
SMPD3-206ENST00000566009 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
SMPD3-206ENST00000566009 C1orf141Q5JVX7 400 aa12.63□□□□□ -0.39
SMPD3-206ENST00000566009 FAM122AQ96E09 287 aa12.63□□□□□ -0.39
SMPD3-206ENST00000566009 CENPFP49454 3210 aa12.63□□□□□ -0.39
SMPD3-206ENST00000566009 SCN7AQ01118 1682 aa12.62□□□□□ -0.39
SMPD3-206ENST00000566009 CAMTA2O94983 1202 aa12.62□□□□□ -0.39
SMPD3-206ENST00000566009 STARD3NLO95772 234 aa12.62□□□□□ -0.39
SMPD3-206ENST00000566009 AOC3Q16853 763 aa12.62□□□□□ -0.39
SMPD3-206ENST00000566009 GRIPAP1Q4V328 841 aa12.62□□□□□ -0.39
SMPD3-206ENST00000566009 GPR153Q6NV75 609 aa12.62□□□□□ -0.39
SMPD3-206ENST00000566009 Q7L0L9 218 aa12.62□□□□□ -0.39
SMPD3-206ENST00000566009 VSIG10Q8N0Z9 540 aa12.62□□□□□ -0.39
SMPD3-206ENST00000566009 DCPSQ96C86 337 aaKnown RBP12.62□□□□□ -0.39
SMPD3-206ENST00000566009 SAMD7Q7Z3H4 446 aa12.61□□□□□ -0.39
SMPD3-206ENST00000566009 MICALL2Q8IY33 904 aa12.61□□□□□ -0.39
SMPD3-206ENST00000566009 ZNF333Q96JL9 665 aa12.61□□□□□ -0.39
SMPD3-206ENST00000566009 MTMR10Q9NXD2 777 aa12.61□□□□□ -0.39
SMPD3-206ENST00000566009 POLR2AP24928 1970 aaKnown RBP12.61□□□□□ -0.39
SMPD3-206ENST00000566009 WTIPA6NIX2 430 aaPredicted RBP12.6□□□□□ -0.39
SMPD3-206ENST00000566009 RAD17O75943 681 aa12.6□□□□□ -0.39
SMPD3-206ENST00000566009 EIF4A2Q14240 407 aaKnown RBP12.6□□□□□ -0.39
SMPD3-206ENST00000566009 SLC4A8Q2Y0W8 1093 aa12.6□□□□□ -0.39
SMPD3-206ENST00000566009 TPTE2Q6XPS3 522 aa12.6□□□□□ -0.39
SMPD3-206ENST00000566009 L3MBTL2Q969R5 705 aa12.6□□□□□ -0.39
SMPD3-206ENST00000566009 SLC52A2Q9HAB3 445 aa12.6□□□□□ -0.39
SMPD3-206ENST00000566009 TNIP1Q15025 636 aa12.59□□□□□ -0.39
SMPD3-206ENST00000566009 TBC1D10BQ4KMP7 808 aaPredicted RBP12.59□□□□□ -0.39
SMPD3-206ENST00000566009 SLC51AQ86UW1 340 aa12.59□□□□□ -0.39
SMPD3-206ENST00000566009 VPS33BQ9H267 617 aa12.59□□□□□ -0.39
SMPD3-206ENST00000566009 MRC1P22897 1456 aa12.59□□□□□ -0.39
SMPD3-206ENST00000566009 EGFRP00533 1210 aa12.58□□□□□ -0.4
SMPD3-206ENST00000566009 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
SMPD3-206ENST00000566009 FKBP1BP68106 108 aa12.58□□□□□ -0.4
SMPD3-206ENST00000566009 CDCA5Q96FF9 252 aa12.58□□□□□ -0.4
SMPD3-206ENST00000566009 VCANP13611 3396 aa12.58□□□□□ -0.4
SMPD3-206ENST00000566009 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
SMPD3-206ENST00000566009 SREBF2Q12772 1141 aa12.57□□□□□ -0.4
SMPD3-206ENST00000566009 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
SMPD3-206ENST00000566009 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
SMPD3-206ENST00000566009 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
SMPD3-206ENST00000566009 CRY2Q49AN0 593 aa12.56□□□□□ -0.4
SMPD3-206ENST00000566009 RBM26Q5T8P6 1007 aaKnown RBP12.56□□□□□ -0.4
SMPD3-206ENST00000566009 MOB2Q70IA6 237 aa12.56□□□□□ -0.4
SMPD3-206ENST00000566009 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
SMPD3-206ENST00000566009 ERO1AQ96HE7 468 aa12.56□□□□□ -0.4
SMPD3-206ENST00000566009 EFCC1Q9HA90 598 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms