RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 GCKRQ14397 625 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 PDE3AQ14432 1141 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 CWF19L2Q2TBE0 894 aaKnown RBP15.98■□□□□ 0.15
SF3B3-206ENST00000565990 SLC10A5Q5PT55 438 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 SLC4A10Q6U841 1118 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 TPTE2Q6XPS3 522 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 BICDL1Q6ZP65 573 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 PPP1R42Q7Z4L9 355 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 TNNQ9UQP3 1299 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 PARP3Q9Y6F1 533 aa15.98■□□□□ 0.15
SF3B3-206ENST00000565990 PLIN1O60240 522 aa15.97■□□□□ 0.15
SF3B3-206ENST00000565990 MS4A1P11836 297 aa15.97■□□□□ 0.15
SF3B3-206ENST00000565990 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.97■□□□□ 0.15
SF3B3-206ENST00000565990 UTP14AQ9BVJ6 771 aaKnown RBP15.97■□□□□ 0.15
SF3B3-206ENST00000565990 SRCIN1Q9C0H9 1055 aa15.97■□□□□ 0.15
SF3B3-206ENST00000565990 CWC25Q9NXE8 425 aaPredicted RBP15.97■□□□□ 0.15
SF3B3-206ENST00000565990 NTSR2O95665 410 aa15.96■□□□□ 0.15
SF3B3-206ENST00000565990 RLBP1P12271 317 aa15.96■□□□□ 0.15
SF3B3-206ENST00000565990 POLD1P28340 1107 aa15.96■□□□□ 0.15
SF3B3-206ENST00000565990 DZIP1LQ8IYY4 767 aaKnown RBP15.96■□□□□ 0.15
SF3B3-206ENST00000565990 ZBTB38Q8NAP3 1195 aaPredicted RBP15.96■□□□□ 0.15
SF3B3-206ENST00000565990 NYXQ9GZU5 481 aa15.96■□□□□ 0.15
SF3B3-206ENST00000565990 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
SF3B3-206ENST00000565990 UTYO14607 1347 aa15.95■□□□□ 0.14
SF3B3-206ENST00000565990 PCCAP05165 728 aaPredicted RBP15.95■□□□□ 0.14
SF3B3-206ENST00000565990 CASP7P55210 303 aa15.95■□□□□ 0.14
SF3B3-206ENST00000565990 NBPF5PQ86XG9 351 aaPredicted RBP15.95■□□□□ 0.14
SF3B3-206ENST00000565990 CLUAP1Q96AJ1 413 aa15.95■□□□□ 0.14
SF3B3-206ENST00000565990 USP44Q9H0E7 712 aa15.95■□□□□ 0.14
SF3B3-206ENST00000565990 KIF13BQ9NQT8 1826 aa15.95■□□□□ 0.14
SF3B3-206ENST00000565990 RRP1P56182 461 aaKnown RBP15.94■□□□□ 0.14
SF3B3-206ENST00000565990 PRR5LQ6MZQ0 368 aa15.94■□□□□ 0.14
SF3B3-206ENST00000565990 TMEM57Q8N5G2 664 aa15.94■□□□□ 0.14
SF3B3-206ENST00000565990 TRMT112Q9UI30 125 aaKnown RBP15.94■□□□□ 0.14
SF3B3-206ENST00000565990 SH3TC1Q8TE82 1336 aa15.94■□□□□ 0.14
SF3B3-206ENST00000565990 KLRG2A4D1S0 409 aaPredicted RBP15.93■□□□□ 0.14
SF3B3-206ENST00000565990 CDHR2Q9BYE9 1310 aa15.93■□□□□ 0.14
SF3B3-206ENST00000565990 ERFEQ4G0M1 354 aa15.92■□□□□ 0.14
SF3B3-206ENST00000565990 C20orf194Q5TEA3 1177 aa15.92■□□□□ 0.14
SF3B3-206ENST00000565990 SYNE4Q8N205 404 aa15.92■□□□□ 0.14
SF3B3-206ENST00000565990 CNBD1Q8NA66 436 aa15.92■□□□□ 0.14
SF3B3-206ENST00000565990 PANK1Q8TE04 598 aa15.92■□□□□ 0.14
SF3B3-206ENST00000565990 FAM89AQ96GI7 184 aa15.92■□□□□ 0.14
SF3B3-206ENST00000565990 BRIP1Q9BX63 1249 aa15.92■□□□□ 0.14
SF3B3-206ENST00000565990 ANKRD31Q8N7Z5 1873 aa15.92■□□□□ 0.14
SF3B3-206ENST00000565990 DDX60Q8IY21 1712 aaKnown RBP15.91■□□□□ 0.14
SF3B3-206ENST00000565990 FAM177BA6PVY3 158 aa15.91■□□□□ 0.14
SF3B3-206ENST00000565990 GRM8O00222 908 aa15.91■□□□□ 0.14
SF3B3-206ENST00000565990 ZBTB7BO15156 539 aaPredicted RBP15.91■□□□□ 0.14
SF3B3-206ENST00000565990 NBPF7P0C2Y1 421 aaPredicted RBP15.91■□□□□ 0.14
SF3B3-206ENST00000565990 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
SF3B3-206ENST00000565990 FTSJ3Q8IY81 847 aaKnown RBP15.91■□□□□ 0.14
SF3B3-206ENST00000565990 RIC1Q4ADV7 1423 aa15.91■□□□□ 0.14
SF3B3-206ENST00000565990 MVPQ14764 893 aaKnown RBP15.9■□□□□ 0.14
SF3B3-206ENST00000565990 PLA2G12BQ9BX93 195 aa15.9■□□□□ 0.14
SF3B3-206ENST00000565990 C9orf78Q9NZ63 289 aaPredicted RBP15.9■□□□□ 0.14
SF3B3-206ENST00000565990 CD2APQ9Y5K6 639 aa15.9■□□□□ 0.14
SF3B3-206ENST00000565990 LRP5O75197 1615 aa15.9■□□□□ 0.14
SF3B3-206ENST00000565990 HSP90B1P14625 803 aaKnown RBP15.89■□□□□ 0.13
SF3B3-206ENST00000565990 GTF2E1P29083 439 aaPredicted RBP15.89■□□□□ 0.13
SF3B3-206ENST00000565990 ST5P78524 1137 aa15.89■□□□□ 0.13
SF3B3-206ENST00000565990 JARID2Q92833 1246 aaPredicted RBP15.89■□□□□ 0.13
SF3B3-206ENST00000565990 KAZALD1Q96I82 304 aa15.89■□□□□ 0.13
SF3B3-206ENST00000565990 PDZRN3Q9UPQ7 1066 aa15.89■□□□□ 0.13
SF3B3-206ENST00000565990 MYH3P11055 1940 aa15.89■□□□□ 0.13
SF3B3-206ENST00000565990 LAMB2P55268 1798 aa15.89■□□□□ 0.13
SF3B3-206ENST00000565990 C10orf71Q711Q0 1435 aa15.88■□□□□ 0.13
SF3B3-206ENST00000565990 IRS4O14654 1257 aaPredicted RBP15.88■□□□□ 0.13
SF3B3-206ENST00000565990 TGFB2P61812 414 aa15.88■□□□□ 0.13
SF3B3-206ENST00000565990 SF3B3Q15393 1217 aaKnown RBP15.88■□□□□ 0.13
SF3B3-206ENST00000565990 UBE3BQ7Z3V4 1068 aa15.88■□□□□ 0.13
SF3B3-206ENST00000565990 CCDC24Q8N4L8 307 aa15.88■□□□□ 0.13
SF3B3-206ENST00000565990 NLRP3Q96P20 1036 aa15.88■□□□□ 0.13
SF3B3-206ENST00000565990 COG6Q9Y2V7 657 aa15.88■□□□□ 0.13
SF3B3-206ENST00000565990 PDE8AO60658 829 aa15.87■□□□□ 0.13
SF3B3-206ENST00000565990 CSF1RP07333 972 aa15.87■□□□□ 0.13
SF3B3-206ENST00000565990 GNAI3P08754 354 aa15.87■□□□□ 0.13
SF3B3-206ENST00000565990 HCLS1P14317 486 aaPredicted RBP15.87■□□□□ 0.13
SF3B3-206ENST00000565990 PDE6BP35913 854 aa15.87■□□□□ 0.13
SF3B3-206ENST00000565990 FOXO4P98177 505 aa15.87■□□□□ 0.13
SF3B3-206ENST00000565990 CRY2Q49AN0 593 aa15.87■□□□□ 0.13
SF3B3-206ENST00000565990 RTL5Q5HYW3 569 aaPredicted RBP15.87■□□□□ 0.13
SF3B3-206ENST00000565990 HDAC5Q9UQL6 1122 aa15.87■□□□□ 0.13
SF3B3-206ENST00000565990 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
SF3B3-206ENST00000565990 KIAA1551Q9HCM1 1747 aa15.86■□□□□ 0.13
SF3B3-206ENST00000565990 ITPRIPQ8IWB1 547 aa15.86■□□□□ 0.13
SF3B3-206ENST00000565990 MEIS3Q99687 375 aa15.86■□□□□ 0.13
SF3B3-206ENST00000565990 ZBTB40Q9NUA8 1239 aa15.86■□□□□ 0.13
SF3B3-206ENST00000565990 DDX19BQ9UMR2 479 aa15.86■□□□□ 0.13
SF3B3-206ENST00000565990 NPHP1O15259 732 aa15.85■□□□□ 0.13
SF3B3-206ENST00000565990 SRGNP10124 158 aa15.85■□□□□ 0.13
SF3B3-206ENST00000565990 KCNA3P22001 575 aa15.85■□□□□ 0.13
SF3B3-206ENST00000565990 HOXA10P31260 410 aaPredicted RBP15.85■□□□□ 0.13
SF3B3-206ENST00000565990 RABL6Q3YEC7 729 aaPredicted RBP15.85■□□□□ 0.13
SF3B3-206ENST00000565990 C3orf67Q6ZVT6 689 aa15.85■□□□□ 0.13
SF3B3-206ENST00000565990 TTLL11Q8NHH1 800 aa15.85■□□□□ 0.13
SF3B3-206ENST00000565990 SUCLG2Q96I99 432 aa15.85■□□□□ 0.13
SF3B3-206ENST00000565990 CHMP4BQ9H444 224 aaKnown RBP15.85■□□□□ 0.13
SF3B3-206ENST00000565990 TNRC6CQ9HCJ0 1690 aaKnown RBP15.84■□□□□ 0.13
SF3B3-206ENST00000565990 UBTFL1P0CB47 393 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms