RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PXDNLA1KZ92 1463 aa9.79□□□□□ -0.84
CDH1-208ENST00000565810 ZBTB7BO15156 539 aaPredicted RBP9.78□□□□□ -0.84
CDH1-208ENST00000565810 UBTFL1P0CB47 393 aaPredicted RBP9.78□□□□□ -0.84
CDH1-208ENST00000565810 TM4SF1P30408 202 aa9.78□□□□□ -0.84
CDH1-208ENST00000565810 NFIXQ14938 502 aa9.78□□□□□ -0.84
CDH1-208ENST00000565810 SUSD4Q5VX71 490 aa9.78□□□□□ -0.84
CDH1-208ENST00000565810 MYH14Q7Z406 1995 aaKnown RBP9.77□□□□□ -0.84
CDH1-208ENST00000565810 RREB1Q92766 1687 aa9.77□□□□□ -0.84
CDH1-208ENST00000565810 CARMIL3Q8ND23 1372 aa9.77□□□□□ -0.84
CDH1-208ENST00000565810 IBTKQ9P2D0 1353 aaPredicted RBP9.77□□□□□ -0.84
CDH1-208ENST00000565810 PSDA5PKW4 1024 aaPredicted RBP9.77□□□□□ -0.85
CDH1-208ENST00000565810 H7C1W4 665 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 GNAI2P04899 355 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 SERPINB2P05120 415 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 PCCAP05165 728 aaPredicted RBP9.77□□□□□ -0.85
CDH1-208ENST00000565810 MMP10P09238 476 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 POLD1P28340 1107 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 ST5P78524 1137 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 MSL1Q68DK7 614 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 EXOC6Q8TAG9 804 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 MEIS3Q99687 375 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 MTFR1LQ9H019 292 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 USP44Q9H0E7 712 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 UBN2Q6ZU65 1347 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 SH3TC1Q8TE82 1336 aa9.77□□□□□ -0.85
CDH1-208ENST00000565810 IRS4O14654 1257 aaPredicted RBP9.76□□□□□ -0.85
CDH1-208ENST00000565810 ZBTB7AO95365 584 aa9.76□□□□□ -0.85
CDH1-208ENST00000565810 NBPF7P0C2Y1 421 aaPredicted RBP9.76□□□□□ -0.85
CDH1-208ENST00000565810 RTL5Q5HYW3 569 aaPredicted RBP9.76□□□□□ -0.85
CDH1-208ENST00000565810 ERICH6BQ5W0A0 696 aa9.76□□□□□ -0.85
CDH1-208ENST00000565810 UBE3BQ7Z3V4 1068 aa9.76□□□□□ -0.85
CDH1-208ENST00000565810 CNBD1Q8NA66 436 aa9.76□□□□□ -0.85
CDH1-208ENST00000565810 FAM89AQ96GI7 184 aa9.76□□□□□ -0.85
CDH1-208ENST00000565810 PDGFDQ9GZP0 370 aaPredicted RBP9.76□□□□□ -0.85
CDH1-208ENST00000565810 UTYO14607 1347 aa9.76□□□□□ -0.85
CDH1-208ENST00000565810 TAF1LQ8IZX4 1826 aa9.75□□□□□ -0.85
CDH1-208ENST00000565810 POLRMTO00411 1230 aaKnown RBP9.75□□□□□ -0.85
CDH1-208ENST00000565810 NTSR2O95665 410 aa9.75□□□□□ -0.85
CDH1-208ENST00000565810 NUTM1Q86Y26 1132 aa9.75□□□□□ -0.85
CDH1-208ENST00000565810 JARID2Q92833 1246 aaPredicted RBP9.75□□□□□ -0.85
CDH1-208ENST00000565810 ZBTB40Q9NUA8 1239 aa9.75□□□□□ -0.85
CDH1-208ENST00000565810 ATF5Q9Y2D1 282 aaPredicted RBP9.75□□□□□ -0.85
CDH1-208ENST00000565810 CACNA1FO60840 1977 aa9.75□□□□□ -0.85
CDH1-208ENST00000565810 CDHR2Q9BYE9 1310 aa9.75□□□□□ -0.85
CDH1-208ENST00000565810 PDE8AO60658 829 aa9.74□□□□□ -0.85
CDH1-208ENST00000565810 DDR1Q08345 913 aa9.74□□□□□ -0.85
CDH1-208ENST00000565810 ERFEQ4G0M1 354 aa9.74□□□□□ -0.85
CDH1-208ENST00000565810 SLC10A5Q5PT55 438 aa9.74□□□□□ -0.85
CDH1-208ENST00000565810 SUCLG2Q96I99 432 aa9.74□□□□□ -0.85
CDH1-208ENST00000565810 NLRP3Q96P20 1036 aa9.74□□□□□ -0.85
CDH1-208ENST00000565810 LRRFIP2Q9Y608 721 aaKnown RBP9.74□□□□□ -0.85
CDH1-208ENST00000565810 NUP188Q5SRE5 1749 aa9.73□□□□□ -0.85
CDH1-208ENST00000565810 HCLS1P14317 486 aaPredicted RBP9.73□□□□□ -0.85
CDH1-208ENST00000565810 CASP7P55210 303 aa9.73□□□□□ -0.85
CDH1-208ENST00000565810 PRR5LQ6MZQ0 368 aa9.73□□□□□ -0.85
CDH1-208ENST00000565810 RPAP2Q8IXW5 612 aaPredicted RBP9.73□□□□□ -0.85
CDH1-208ENST00000565810 PLA2G12BQ9BX93 195 aa9.73□□□□□ -0.85
CDH1-208ENST00000565810 C1orf115Q9H7X2 142 aa9.73□□□□□ -0.85
CDH1-208ENST00000565810 CHMP3Q9Y3E7 222 aa9.73□□□□□ -0.85
CDH1-208ENST00000565810 UBR3Q6ZT12 1888 aa9.72□□□□□ -0.85
CDH1-208ENST00000565810 HMMRO75330 724 aa9.72□□□□□ -0.85
CDH1-208ENST00000565810 CCDC152Q4G0S7 254 aa9.72□□□□□ -0.85
CDH1-208ENST00000565810 SYNE4Q8N205 404 aa9.72□□□□□ -0.85
CDH1-208ENST00000565810 CCDC24Q8N4L8 307 aa9.72□□□□□ -0.85
CDH1-208ENST00000565810 BRIP1Q9BX63 1249 aa9.72□□□□□ -0.85
CDH1-208ENST00000565810 BICC1Q9H694 974 aaKnown RBP9.72□□□□□ -0.85
CDH1-208ENST00000565810 SPON1Q9HCB6 807 aa9.72□□□□□ -0.85
CDH1-208ENST00000565810 PDZRN3Q9UPQ7 1066 aa9.72□□□□□ -0.85
CDH1-208ENST00000565810 PDE6BP35913 854 aa9.71□□□□□ -0.86
CDH1-208ENST00000565810 CTSWP56202 376 aa9.71□□□□□ -0.86
CDH1-208ENST00000565810 ATP8B2P98198 1209 aa9.71□□□□□ -0.86
CDH1-208ENST00000565810 CCDC57Q2TAC2 916 aa9.71□□□□□ -0.86
CDH1-208ENST00000565810 LMBR1LQ6UX01 489 aa9.71□□□□□ -0.86
CDH1-208ENST00000565810 PIAS4Q8N2W9 510 aaPredicted RBP9.71□□□□□ -0.86
CDH1-208ENST00000565810 SRGAP3O43295 1099 aa9.7□□□□□ -0.86
CDH1-208ENST00000565810 CSF1RP07333 972 aa9.7□□□□□ -0.86
CDH1-208ENST00000565810 FOXO4P98177 505 aa9.7□□□□□ -0.86
CDH1-208ENST00000565810 IFIT5Q13325 482 aaKnown RBP9.7□□□□□ -0.86
CDH1-208ENST00000565810 SF3B3Q15393 1217 aaKnown RBP9.7□□□□□ -0.86
CDH1-208ENST00000565810 RABL6Q3YEC7 729 aaPredicted RBP9.7□□□□□ -0.86
CDH1-208ENST00000565810 TAF7LQ5H9L4 462 aa9.7□□□□□ -0.86
CDH1-208ENST00000565810 EPHA10Q5JZY3 1008 aa9.7□□□□□ -0.86
CDH1-208ENST00000565810 CEP85Q6P2H3 762 aa9.7□□□□□ -0.86
CDH1-208ENST00000565810 DDX46Q7L014 1031 aaKnown RBP9.7□□□□□ -0.86
CDH1-208ENST00000565810 ANKRD44Q8N8A2 993 aa9.7□□□□□ -0.86
CDH1-208ENST00000565810 TTLL11Q8NHH1 800 aa9.7□□□□□ -0.86
CDH1-208ENST00000565810 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
CDH1-208ENST00000565810 KAZALD1Q96I82 304 aa9.7□□□□□ -0.86
CDH1-208ENST00000565810 RWDD1Q9H446 243 aaPredicted RBP9.7□□□□□ -0.86
CDH1-208ENST00000565810 PCDHB15Q9Y5E8 787 aa9.7□□□□□ -0.86
CDH1-208ENST00000565810 ANKRD18BA2A2Z9 1011 aa9.69□□□□□ -0.86
CDH1-208ENST00000565810 H0YIN7 160 aa9.69□□□□□ -0.86
CDH1-208ENST00000565810 SCN7AQ01118 1682 aa9.69□□□□□ -0.86
CDH1-208ENST00000565810 MTX1Q13505 466 aa9.69□□□□□ -0.86
CDH1-208ENST00000565810 RBM17Q96I25 401 aaKnown RBP9.69□□□□□ -0.86
CDH1-208ENST00000565810 ABCC12Q96J65 1359 aa9.69□□□□□ -0.86
CDH1-208ENST00000565810 CCDC85AQ96PX6 553 aaPredicted RBP9.69□□□□□ -0.86
CDH1-208ENST00000565810 CDC5LQ99459 802 aaKnown RBP9.69□□□□□ -0.86
CDH1-208ENST00000565810 PPP4R2Q9NY27 417 aa9.69□□□□□ -0.86
CDH1-208ENST00000565810 PPP1R1BQ9UD71 204 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms