RNA–Protein interactions for RNA: ENST00000565617.1

AP003469.4-201, humanhuman

BASIC

Gene AP003469.4, Length 2,825 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003469.4-201ENST00000565617 TOMM20Q15388 145 aa11.75□□□□□ -0.53
AP003469.4-201ENST00000565617 ZCCHC8Q6NZY4 707 aaKnown RBP11.75□□□□□ -0.53
AP003469.4-201ENST00000565617 VPS37AQ8NEZ2 397 aa11.75□□□□□ -0.53
AP003469.4-201ENST00000565617 LDHAP00338 332 aaKnown RBP11.74□□□□□ -0.53
AP003469.4-201ENST00000565617 NPAS4Q8IUM7 802 aa11.74□□□□□ -0.53
AP003469.4-201ENST00000565617 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
AP003469.4-201ENST00000565617 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
AP003469.4-201ENST00000565617 XRCC6P12956 609 aaKnown RBP eCLIP11.74□□□□□ -0.53
AP003469.4-201ENST00000565617 CASQ1P31415 396 aa11.74□□□□□ -0.53
AP003469.4-201ENST00000565617 TCEAL9Q9UHQ7 104 aa11.74□□□□□ -0.53
AP003469.4-201ENST00000565617 DDX11L8A8MPP1 907 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 CLCN1P35523 988 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 CCAR1Q8IX12 1150 aaKnown RBP11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 DZIP1LQ8IYY4 767 aaKnown RBP11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 AFAP1Q8N556 730 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 TANGO6Q9C0B7 1094 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 TBC1D2BQ9UPU7 963 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 MRE11P49959 708 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 IFT122Q9HBG6 1241 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 ZNF232Q9UNY5 417 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 NOS1P29475 1434 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 TRIM64CA6NLI5 447 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 NOP9Q86U38 636 aaKnown RBP11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 TMEM63CQ9P1W3 806 aa11.73□□□□□ -0.53
AP003469.4-201ENST00000565617 ABCC11Q96J66 1382 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 ZNF853P0CG23 659 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 CCDC93Q567U6 631 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 DNAJC21Q5F1R6 531 aaKnown RBP11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 PCDH12Q9NPG4 1184 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 SUN2Q9UH99 717 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 DDX19BQ9UMR2 479 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 TTF2Q9UNY4 1162 aaKnown RBP11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 TNNQ9UQP3 1299 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 ANKRD36BQ8N2N9 1353 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 BICDL2A1A5D9 508 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 SYCP2LQ5T4T6 812 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 SLC39A13Q96H72 371 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 AS3MTQ9HBK9 375 aa11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 RRP7AQ9Y3A4 280 aaKnown RBP11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 MRPL42Q9Y6G3 142 aaKnown RBP11.72□□□□□ -0.53
AP003469.4-201ENST00000565617 IL16Q14005 1332 aa11.71□□□□□ -0.53
AP003469.4-201ENST00000565617 TBC1D12O60347 775 aa11.71□□□□□ -0.53
AP003469.4-201ENST00000565617 TSNAXIP1Q2TAA8 658 aa11.71□□□□□ -0.53
AP003469.4-201ENST00000565617 SNX21Q969T3 373 aa11.71□□□□□ -0.53
AP003469.4-201ENST00000565617 KIF3BO15066 747 aa11.71□□□□□ -0.54
AP003469.4-201ENST00000565617 MTHFSP49914 203 aa11.71□□□□□ -0.54
AP003469.4-201ENST00000565617 EIF5P55010 431 aaKnown RBP11.71□□□□□ -0.54
AP003469.4-201ENST00000565617 PCGF5Q86SE9 256 aa11.71□□□□□ -0.54
AP003469.4-201ENST00000565617 DRC7Q8IY82 874 aa11.71□□□□□ -0.54
AP003469.4-201ENST00000565617 C14orf93Q9H972 538 aaKnown RBP11.71□□□□□ -0.54
AP003469.4-201ENST00000565617 PPFIA3O75145 1194 aa11.7□□□□□ -0.54
AP003469.4-201ENST00000565617 DDIT3P35638 169 aa11.7□□□□□ -0.54
AP003469.4-201ENST00000565617 ALKBH2Q6NS38 261 aa11.7□□□□□ -0.54
AP003469.4-201ENST00000565617 DZIP3Q86Y13 1208 aaKnown RBP11.7□□□□□ -0.54
AP003469.4-201ENST00000565617 ZHX3Q9H4I2 956 aa11.7□□□□□ -0.54
AP003469.4-201ENST00000565617 IFT57Q9NWB7 429 aa11.7□□□□□ -0.54
AP003469.4-201ENST00000565617 IPO7O95373 1038 aaKnown RBP11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 S100BP04271 92 aaPredicted RBP11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 FAM160A1Q05DH4 1040 aa11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 ZNF396Q96N95 335 aaPredicted RBP11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 MKS1Q9NXB0 559 aa11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 REREQ9P2R6 1566 aa11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 HMMRO75330 724 aa11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 ERCC5P28715 1186 aaPredicted RBP11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 GTF2F1P35269 517 aaKnown RBP eCLIP11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 PEX19P40855 299 aa11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 CHCHD4Q8N4Q1 142 aa11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 EPAS1Q99814 870 aa11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 TULP4Q9NRJ4 1543 aa11.69□□□□□ -0.54
AP003469.4-201ENST00000565617 BOLA2-SMG1P6H3BVE0 249 aa11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 CCDC34Q96HJ3 373 aa11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 SLC12A5Q9H2X9 1139 aa11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 PNNQ9H307 717 aaKnown RBP11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 COL3A1P02461 1466 aaPredicted RBP11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 GLI2P10070 1586 aa11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 ARHGEF28Q8N1W1 1705 aaKnown RBP11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 KIDINS220Q9ULH0 1771 aa11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 XPCQ01831 940 aaPredicted RBP11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 CDC37Q16543 378 aaPredicted RBP11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 HDAC9Q9UKV0 1011 aa11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 MED14O60244 1454 aa11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 CTAGE5O15320 804 aa11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 ZSCAN20P17040 1043 aaPredicted RBP11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 KIAA1958Q8N8K9 716 aa11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 DDX56Q9NY93 547 aaKnown RBP11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 THRAP3Q9Y2W1 955 aaKnown RBP11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 ANKRD26Q9UPS8 1709 aa11.68□□□□□ -0.54
AP003469.4-201ENST00000565617 KIF16BQ96L93 1317 aa11.67□□□□□ -0.54
AP003469.4-201ENST00000565617 CFAP74Q9C0B2 1584 aa11.67□□□□□ -0.54
AP003469.4-201ENST00000565617 KLHL33A6NCF5 533 aa11.67□□□□□ -0.54
AP003469.4-201ENST00000565617 MTA2O94776 668 aa11.67□□□□□ -0.54
AP003469.4-201ENST00000565617 ATG7O95352 703 aa11.67□□□□□ -0.54
AP003469.4-201ENST00000565617 TRIM27P14373 513 aa11.67□□□□□ -0.54
AP003469.4-201ENST00000565617 CLK1P49759 484 aaKnown RBP11.67□□□□□ -0.54
AP003469.4-201ENST00000565617 ZNF394Q53GI3 561 aa11.67□□□□□ -0.54
AP003469.4-201ENST00000565617 ATF7IPQ6VMQ6 1270 aa11.67□□□□□ -0.54
AP003469.4-201ENST00000565617 TMC2Q8TDI7 906 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms