RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 IL17REQ8NFR9 667 aa8.57□□□□□ -1.04
TCF4-229ENST00000565580 DDX27Q96GQ7 796 aaKnown RBP8.57□□□□□ -1.04
TCF4-229ENST00000565580 PHACTR3Q96KR7 559 aa8.57□□□□□ -1.04
TCF4-229ENST00000565580 ZBED2Q9BTP6 218 aa8.57□□□□□ -1.04
TCF4-229ENST00000565580 ZBTB1Q9Y2K1 713 aa8.57□□□□□ -1.04
TCF4-229ENST00000565580 PARP3Q9Y6F1 533 aa8.57□□□□□ -1.04
TCF4-229ENST00000565580 UBR2Q8IWV8 1755 aa8.56□□□□□ -1.04
TCF4-229ENST00000565580 GIGYF1O75420 1035 aaPredicted RBP8.56□□□□□ -1.04
TCF4-229ENST00000565580 PPP2R1AP30153 589 aa8.56□□□□□ -1.04
TCF4-229ENST00000565580 TGFB2P61812 414 aa8.56□□□□□ -1.04
TCF4-229ENST00000565580 USPL1Q5W0Q7 1092 aa8.56□□□□□ -1.04
TCF4-229ENST00000565580 THSD4Q6ZMP0 1018 aa8.56□□□□□ -1.04
TCF4-229ENST00000565580 GAS2L2Q8NHY3 880 aa8.56□□□□□ -1.04
TCF4-229ENST00000565580 WNT2BQ93097 391 aa8.56□□□□□ -1.04
TCF4-229ENST00000565580 RSPH6AQ9H0K4 717 aa8.56□□□□□ -1.04
TCF4-229ENST00000565580 GNAT3A8MTJ3 354 aa8.55□□□□□ -1.04
TCF4-229ENST00000565580 POLRMTO00411 1230 aaKnown RBP8.55□□□□□ -1.04
TCF4-229ENST00000565580 KCNA3P22001 575 aa8.55□□□□□ -1.04
TCF4-229ENST00000565580 TM4SF1P30408 202 aa8.55□□□□□ -1.04
TCF4-229ENST00000565580 PRKAR2BP31323 418 aa8.55□□□□□ -1.04
TCF4-229ENST00000565580 ZNF526Q8TF50 670 aaPredicted RBP8.55□□□□□ -1.04
TCF4-229ENST00000565580 ZNF496Q96IT1 587 aaPredicted RBP8.55□□□□□ -1.04
TCF4-229ENST00000565580 LARP6Q9BRS8 491 aaKnown RBP8.55□□□□□ -1.04
TCF4-229ENST00000565580 BCS1LQ9Y276 419 aa8.55□□□□□ -1.04
TCF4-229ENST00000565580 COL15A1P39059 1388 aa8.55□□□□□ -1.04
TCF4-229ENST00000565580 BRCA1P38398 1863 aaKnown RBP8.54□□□□□ -1.04
TCF4-229ENST00000565580 SIPA1L3O60292 1781 aaPredicted RBP8.54□□□□□ -1.04
TCF4-229ENST00000565580 CEMIPQ8WUJ3 1361 aa8.54□□□□□ -1.04
TCF4-229ENST00000565580 KCNQ3O43525 872 aa8.54□□□□□ -1.04
TCF4-229ENST00000565580 ZPR1O75312 459 aa8.54□□□□□ -1.04
TCF4-229ENST00000565580 TEFQ10587 303 aa8.54□□□□□ -1.04
TCF4-229ENST00000565580 TTC5Q8N0Z6 440 aa8.54□□□□□ -1.04
TCF4-229ENST00000565580 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
TCF4-229ENST00000565580 CFAP53Q96M91 514 aa8.54□□□□□ -1.04
TCF4-229ENST00000565580 NARFQ9UHQ1 456 aa8.54□□□□□ -1.04
TCF4-229ENST00000565580 HEG1Q9ULI3 1381 aa8.53□□□□□ -1.04
TCF4-229ENST00000565580 FCHSD2O94868 740 aa8.53□□□□□ -1.04
TCF4-229ENST00000565580 U2AF1L5P0DN76 240 aaPredicted RBP8.53□□□□□ -1.04
TCF4-229ENST00000565580 CANXP27824 592 aaKnown RBP8.53□□□□□ -1.04
TCF4-229ENST00000565580 CHRNA5P30532 468 aa8.53□□□□□ -1.04
TCF4-229ENST00000565580 U2AF1Q01081 240 aaKnown RBP eCLIP8.53□□□□□ -1.04
TCF4-229ENST00000565580 MFSD10Q14728 455 aa8.53□□□□□ -1.04
TCF4-229ENST00000565580 NFIXQ14938 502 aa8.53□□□□□ -1.04
TCF4-229ENST00000565580 ZNF790Q6PG37 636 aa8.53□□□□□ -1.04
TCF4-229ENST00000565580 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
TCF4-229ENST00000565580 CEP350Q5VT06 3117 aa8.53□□□□□ -1.04
TCF4-229ENST00000565580 GTPBP6O43824 516 aaPredicted RBP8.52□□□□□ -1.05
TCF4-229ENST00000565580 EIF5P55010 431 aaKnown RBP8.52□□□□□ -1.05
TCF4-229ENST00000565580 ARHGAP27Q6ZUM4 889 aa8.52□□□□□ -1.05
TCF4-229ENST00000565580 MCM10Q7L590 875 aa8.52□□□□□ -1.05
TCF4-229ENST00000565580 NUDCQ9Y266 331 aa8.52□□□□□ -1.05
TCF4-229ENST00000565580 AFDNP55196 1824 aaKnown RBP8.52□□□□□ -1.05
TCF4-229ENST00000565580 CARMIL3Q8ND23 1372 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 PRAMEF22A3QJZ6 481 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 BTBD11A6QL63 1104 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 PPP1R3GB7ZBB8 358 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 STARD3NLO95772 234 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 SERPINB2P05120 415 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 DCTN1Q14203 1278 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 BICDL1Q6ZP65 573 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 FBXW7Q969H0 707 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 FMNL2Q96PY5 1086 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 ADAM33Q9BZ11 813 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 PIM2Q9P1W9 311 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 NRXN2Q9P2S2 1712 aa8.51□□□□□ -1.05
TCF4-229ENST00000565580 ARFGEF1Q9Y6D6 1849 aa8.5□□□□□ -1.05
TCF4-229ENST00000565580 A1BGP04217 495 aa8.5□□□□□ -1.05
TCF4-229ENST00000565580 DALRD3Q5D0E6 543 aaKnown RBP8.5□□□□□ -1.05
TCF4-229ENST00000565580 TEX13AQ9BXU3 409 aaPredicted RBP8.5□□□□□ -1.05
TCF4-229ENST00000565580 RABGEF1Q9UJ41 708 aa8.5□□□□□ -1.05
TCF4-229ENST00000565580 TBC1D2BQ9UPU7 963 aa8.5□□□□□ -1.05
TCF4-229ENST00000565580 ZNF330Q9Y3S2 320 aaPredicted RBP8.5□□□□□ -1.05
TCF4-229ENST00000565580 A0A087WZG4 1122 aa8.49□□□□□ -1.05
TCF4-229ENST00000565580 IL6STP40189 918 aaPredicted RBP8.49□□□□□ -1.05
TCF4-229ENST00000565580 PIP4K2AP48426 406 aaPredicted RBP8.49□□□□□ -1.05
TCF4-229ENST00000565580 PLCB2Q00722 1185 aa8.49□□□□□ -1.05
TCF4-229ENST00000565580 C9orf131Q5VYM1 1079 aa8.49□□□□□ -1.05
TCF4-229ENST00000565580 TBC1D9BQ66K14 1250 aa8.49□□□□□ -1.05
TCF4-229ENST00000565580 USP16Q9Y5T5 823 aa8.49□□□□□ -1.05
TCF4-229ENST00000565580 SCN7AQ01118 1682 aa8.49□□□□□ -1.05
TCF4-229ENST00000565580 CAMTA2O94983 1202 aa8.48□□□□□ -1.05
TCF4-229ENST00000565580 TYW1BQ6NUM6 668 aa8.48□□□□□ -1.05
TCF4-229ENST00000565580 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
TCF4-229ENST00000565580 ANKK1Q8NFD2 765 aa8.48□□□□□ -1.05
TCF4-229ENST00000565580 RTF1Q92541 710 aaKnown RBP8.48□□□□□ -1.05
TCF4-229ENST00000565580 PRELPP51888 382 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 RASSF7Q02833 373 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 PRR5LQ6MZQ0 368 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 NYAP1Q6ZVC0 841 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 LAPTM4BQ86VI4 370 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 C2CD5Q86YS7 1000 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 PLEKHF1Q96S99 279 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 NMRK2Q9NPI5 230 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 MIS18AQ9NYP9 233 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 DLEC1Q9Y238 1755 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 ANKRD31Q8N7Z5 1873 aa8.47□□□□□ -1.05
TCF4-229ENST00000565580 NBPF26B4DH59 902 aa8.46□□□□□ -1.06
TCF4-229ENST00000565580 HTATSF1O43719 755 aaKnown RBP8.46□□□□□ -1.06
TCF4-229ENST00000565580 SNRPA1P09661 255 aaKnown RBP8.46□□□□□ -1.06
TCF4-229ENST00000565580 TAF7Q15545 349 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms