RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 VPS33BQ9H267 617 aa12.29□□□□□ -0.44
VPS9D1-205ENST00000565452 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
VPS9D1-205ENST00000565452 FAM177BA6PVY3 158 aa12.28□□□□□ -0.44
VPS9D1-205ENST00000565452 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
VPS9D1-205ENST00000565452 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
VPS9D1-205ENST00000565452 C2orf69Q8N8R5 385 aa12.28□□□□□ -0.44
VPS9D1-205ENST00000565452 HPS5Q9UPZ3 1129 aa12.28□□□□□ -0.44
VPS9D1-205ENST00000565452 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
VPS9D1-205ENST00000565452 ANKRD31Q8N7Z5 1873 aa12.27□□□□□ -0.44
VPS9D1-205ENST00000565452 RGL2O15211 777 aa12.27□□□□□ -0.45
VPS9D1-205ENST00000565452 ZNF157P51786 506 aaPredicted RBP12.27□□□□□ -0.45
VPS9D1-205ENST00000565452 USP48Q86UV5 1035 aa12.27□□□□□ -0.45
VPS9D1-205ENST00000565452 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.45
VPS9D1-205ENST00000565452 BCL2L13Q9BXK5 485 aa12.27□□□□□ -0.45
VPS9D1-205ENST00000565452 ZNRF3Q9ULT6 936 aa12.27□□□□□ -0.45
VPS9D1-205ENST00000565452 LTBP1Q14766 1721 aa12.27□□□□□ -0.45
VPS9D1-205ENST00000565452 ANKRD26Q9UPS8 1709 aa12.27□□□□□ -0.45
VPS9D1-205ENST00000565452 FAM155AB1AL88 458 aaPredicted RBP12.26□□□□□ -0.45
VPS9D1-205ENST00000565452 PPIP5K2O43314 1243 aa12.26□□□□□ -0.45
VPS9D1-205ENST00000565452 TNIP1Q15025 636 aa12.26□□□□□ -0.45
VPS9D1-205ENST00000565452 RPGRQ92834 1020 aaKnown RBP12.26□□□□□ -0.45
VPS9D1-205ENST00000565452 HDAC9Q9UKV0 1011 aa12.26□□□□□ -0.45
VPS9D1-205ENST00000565452 H7C1D1 291 aa12.25□□□□□ -0.45
VPS9D1-205ENST00000565452 HMOX1P09601 288 aa12.25□□□□□ -0.45
VPS9D1-205ENST00000565452 HOXA10P31260 410 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-205ENST00000565452 GMPSP49915 693 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-205ENST00000565452 CXCL9Q07325 125 aa12.25□□□□□ -0.45
VPS9D1-205ENST00000565452 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
VPS9D1-205ENST00000565452 RBM17Q96I25 401 aaKnown RBP12.25□□□□□ -0.45
VPS9D1-205ENST00000565452 CSRNP1Q96S65 589 aa12.25□□□□□ -0.45
VPS9D1-205ENST00000565452 NYXQ9GZU5 481 aa12.25□□□□□ -0.45
VPS9D1-205ENST00000565452 TCERG1O14776 1098 aaKnown RBP12.24□□□□□ -0.45
VPS9D1-205ENST00000565452 COL11A2P13942 1736 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-205ENST00000565452 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-205ENST00000565452 SUPT20HQ8NEM7 779 aa12.24□□□□□ -0.45
VPS9D1-205ENST00000565452 GBA2Q9HCG7 927 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-205ENST00000565452 NPC1L1Q9UHC9 1359 aa12.24□□□□□ -0.45
VPS9D1-205ENST00000565452 CNOT7Q9UIV1 285 aaKnown RBP12.24□□□□□ -0.45
VPS9D1-205ENST00000565452 USP16Q9Y5T5 823 aa12.24□□□□□ -0.45
VPS9D1-205ENST00000565452 CDHR2Q9BYE9 1310 aa12.23□□□□□ -0.45
VPS9D1-205ENST00000565452 IL17REQ8NFR9 667 aa12.23□□□□□ -0.45
VPS9D1-205ENST00000565452 CRAMP1Q96RY5 1269 aa12.23□□□□□ -0.45
VPS9D1-205ENST00000565452 PANK3Q9H999 370 aa12.23□□□□□ -0.45
VPS9D1-205ENST00000565452 MRC1P22897 1456 aa12.22□□□□□ -0.45
VPS9D1-205ENST00000565452 BTBD11A6QL63 1104 aa12.22□□□□□ -0.45
VPS9D1-205ENST00000565452 GNAT3A8MTJ3 354 aa12.22□□□□□ -0.45
VPS9D1-205ENST00000565452 AOC3Q16853 763 aa12.22□□□□□ -0.45
VPS9D1-205ENST00000565452 TRPM7Q96QT4 1865 aa12.21□□□□□ -0.45
VPS9D1-205ENST00000565452 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
VPS9D1-205ENST00000565452 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.45
VPS9D1-205ENST00000565452 PIP4K2AP48426 406 aaPredicted RBP12.21□□□□□ -0.45
VPS9D1-205ENST00000565452 KRT26Q7Z3Y9 468 aa12.21□□□□□ -0.45
VPS9D1-205ENST00000565452 SCN11AQ9UI33 1791 aa12.2□□□□□ -0.46
VPS9D1-205ENST00000565452 KIF7Q2M1P5 1343 aa12.2□□□□□ -0.46
VPS9D1-205ENST00000565452 RAD17O75943 681 aa12.2□□□□□ -0.46
VPS9D1-205ENST00000565452 TRPM4Q8TD43 1214 aa12.2□□□□□ -0.46
VPS9D1-205ENST00000565452 DCPSQ96C86 337 aaKnown RBP12.2□□□□□ -0.46
VPS9D1-205ENST00000565452 SNED1Q8TER0 1413 aa12.2□□□□□ -0.46
VPS9D1-205ENST00000565452 SLC10A3P09131 477 aa12.19□□□□□ -0.46
VPS9D1-205ENST00000565452 FXR1P51114 621 aaKnown RBP eCLIP12.19□□□□□ -0.46
VPS9D1-205ENST00000565452 HLFQ16534 295 aa12.19□□□□□ -0.46
VPS9D1-205ENST00000565452 FBXO46Q6PJ61 603 aaPredicted RBP12.19□□□□□ -0.46
VPS9D1-205ENST00000565452 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
VPS9D1-205ENST00000565452 GAS2L2Q8NHY3 880 aa12.19□□□□□ -0.46
VPS9D1-205ENST00000565452 ATP6V0A2Q9Y487 856 aa12.19□□□□□ -0.46
VPS9D1-205ENST00000565452 CLSPNQ9HAW4 1339 aa12.18□□□□□ -0.46
VPS9D1-205ENST00000565452 KCNQ3O43525 872 aa12.18□□□□□ -0.46
VPS9D1-205ENST00000565452 DIAPH1O60610 1272 aaKnown RBP12.18□□□□□ -0.46
VPS9D1-205ENST00000565452 DLK2Q6UY11 383 aa12.18□□□□□ -0.46
VPS9D1-205ENST00000565452 MICALL2Q8IY33 904 aa12.18□□□□□ -0.46
VPS9D1-205ENST00000565452 ZNF296Q8WUU4 475 aaPredicted RBP12.18□□□□□ -0.46
VPS9D1-205ENST00000565452 DPF2Q92785 391 aa12.18□□□□□ -0.46
VPS9D1-205ENST00000565452 RTFDC1Q9BY42 306 aaPredicted RBP12.18□□□□□ -0.46
VPS9D1-205ENST00000565452 KNSTRNQ9Y448 316 aa12.18□□□□□ -0.46
VPS9D1-205ENST00000565452 ARFGEF2Q9Y6D5 1785 aa12.18□□□□□ -0.46
VPS9D1-205ENST00000565452 COL4A5P29400 1685 aa12.17□□□□□ -0.46
VPS9D1-205ENST00000565452 DLL1O00548 723 aa12.17□□□□□ -0.46
VPS9D1-205ENST00000565452 BBOX1O75936 387 aa12.17□□□□□ -0.46
VPS9D1-205ENST00000565452 INTS3Q68E01 1043 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-205ENST00000565452 DPP8Q6V1X1 898 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-205ENST00000565452 NLRP3Q96P20 1036 aa12.17□□□□□ -0.46
VPS9D1-205ENST00000565452 CACNA1SQ13698 1873 aa12.17□□□□□ -0.46
VPS9D1-205ENST00000565452 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
VPS9D1-205ENST00000565452 ERVV-1B6SEH8 477 aa12.16□□□□□ -0.46
VPS9D1-205ENST00000565452 TBC1D8O95759 1140 aa12.16□□□□□ -0.46
VPS9D1-205ENST00000565452 KIAA2012Q0VF49 1180 aa12.16□□□□□ -0.46
VPS9D1-205ENST00000565452 NOM1Q5C9Z4 860 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-205ENST00000565452 NBPF10Q6P3W6 841 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-205ENST00000565452 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
VPS9D1-205ENST00000565452 SP8Q8IXZ3 490 aa12.16□□□□□ -0.46
VPS9D1-205ENST00000565452 MPNDQ8N594 471 aa12.16□□□□□ -0.46
VPS9D1-205ENST00000565452 PRAMEF22A3QJZ6 481 aa12.15□□□□□ -0.46
VPS9D1-205ENST00000565452 TBC1D10BQ4KMP7 808 aaPredicted RBP12.15□□□□□ -0.46
VPS9D1-205ENST00000565452 SULF1Q8IWU6 871 aa12.15□□□□□ -0.46
VPS9D1-205ENST00000565452 SCN7AQ01118 1682 aa12.14□□□□□ -0.47
VPS9D1-205ENST00000565452 SHTN1A0MZ66 631 aa12.14□□□□□ -0.47
VPS9D1-205ENST00000565452 GPR25O00155 361 aa12.14□□□□□ -0.47
VPS9D1-205ENST00000565452 RBM26Q5T8P6 1007 aaKnown RBP12.14□□□□□ -0.47
VPS9D1-205ENST00000565452 ADM5C9JUS6 153 aa12.13□□□□□ -0.47
VPS9D1-205ENST00000565452 FKTNO75072 461 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms