RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 PCMTD2Q9NV79 361 aa9.94□□□□□ -0.82
CHD9-214ENST00000565119 DNAJB12Q9NXW2 375 aaKnown RBP9.94□□□□□ -0.82
CHD9-214ENST00000565119 ABL2P42684 1182 aa9.93□□□□□ -0.82
CHD9-214ENST00000565119 MEGF10Q96KG7 1140 aa9.93□□□□□ -0.82
CHD9-214ENST00000565119 FMNL2Q96PY5 1086 aa9.93□□□□□ -0.82
CHD9-214ENST00000565119 PHACTR1Q9C0D0 580 aa9.93□□□□□ -0.82
CHD9-214ENST00000565119 TXKP42681 527 aa9.92□□□□□ -0.82
CHD9-214ENST00000565119 WASHC4Q2M389 1173 aa9.92□□□□□ -0.82
CHD9-214ENST00000565119 RGS9O75916 674 aaPredicted RBP9.91□□□□□ -0.82
CHD9-214ENST00000565119 SKIP12755 728 aa9.91□□□□□ -0.82
CHD9-214ENST00000565119 SOX11P35716 441 aa9.91□□□□□ -0.82
CHD9-214ENST00000565119 HIRAP54198 1017 aaPredicted RBP9.91□□□□□ -0.82
CHD9-214ENST00000565119 POTEAQ6S8J7 498 aa9.91□□□□□ -0.82
CHD9-214ENST00000565119 PRR23CQ6ZRP0 262 aa9.91□□□□□ -0.82
CHD9-214ENST00000565119 FBXO11Q86XK2 927 aa9.91□□□□□ -0.82
CHD9-214ENST00000565119 COBLO75128 1261 aa9.9□□□□□ -0.82
CHD9-214ENST00000565119 PSMA6P60900 246 aaKnown RBP9.9□□□□□ -0.82
CHD9-214ENST00000565119 NCOA4Q13772 614 aa9.9□□□□□ -0.82
CHD9-214ENST00000565119 MSL1Q68DK7 614 aa9.9□□□□□ -0.82
CHD9-214ENST00000565119 KRTAP4-7Q9BYR0 210 aa9.9□□□□□ -0.82
CHD9-214ENST00000565119 TSPAN10Q9H1Z9 355 aaPredicted RBP9.9□□□□□ -0.82
CHD9-214ENST00000565119 SSTR4P31391 388 aa9.89□□□□□ -0.83
CHD9-214ENST00000565119 DTWD1Q8N5C7 304 aa9.89□□□□□ -0.83
CHD9-214ENST00000565119 LZTS3O60299 673 aaPredicted RBP9.88□□□□□ -0.83
CHD9-214ENST00000565119 GRIK5Q16478 980 aa9.88□□□□□ -0.83
CHD9-214ENST00000565119 LCE1DQ5T752 114 aa9.88□□□□□ -0.83
CHD9-214ENST00000565119 GSX2Q9BZM3 304 aa9.88□□□□□ -0.83
CHD9-214ENST00000565119 YBX3P16989 372 aaKnown RBP eCLIP9.87□□□□□ -0.83
CHD9-214ENST00000565119 BTLAQ7Z6A9 289 aa9.87□□□□□ -0.83
CHD9-214ENST00000565119 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
CHD9-214ENST00000565119 FSTP19883 344 aa9.86□□□□□ -0.83
CHD9-214ENST00000565119 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
CHD9-214ENST00000565119 PLAURQ03405 335 aa9.86□□□□□ -0.83
CHD9-214ENST00000565119 NFKB1P19838 968 aa9.85□□□□□ -0.83
CHD9-214ENST00000565119 CD97P48960 835 aa9.85□□□□□ -0.83
CHD9-214ENST00000565119 IGF2-ASQ6U949 168 aa9.85□□□□□ -0.83
CHD9-214ENST00000565119 DEPDC4Q8N2C3 294 aa9.85□□□□□ -0.83
CHD9-214ENST00000565119 TPCN2Q8NHX9 752 aa9.85□□□□□ -0.83
CHD9-214ENST00000565119 KIAA1024Q9UPX6 916 aa9.85□□□□□ -0.83
CHD9-214ENST00000565119 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.85□□□□□ -0.83
CHD9-214ENST00000565119 ZBTB7BO15156 539 aaPredicted RBP9.84□□□□□ -0.83
CHD9-214ENST00000565119 FAM35AQ86V20 835 aa9.84□□□□□ -0.83
CHD9-214ENST00000565119 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
CHD9-214ENST00000565119 LPIN3Q9BQK8 851 aa9.84□□□□□ -0.83
CHD9-214ENST00000565119 DEAF1O75398 565 aaPredicted RBP9.83□□□□□ -0.84
CHD9-214ENST00000565119 CPB1P15086 417 aa9.83□□□□□ -0.84
CHD9-214ENST00000565119 IRAK1P51617 712 aa9.83□□□□□ -0.84
CHD9-214ENST00000565119 DZIP1LQ8IYY4 767 aaKnown RBP9.83□□□□□ -0.84
CHD9-214ENST00000565119 PNMA5Q96PV4 448 aa9.83□□□□□ -0.84
CHD9-214ENST00000565119 CHMP3Q9Y3E7 222 aa9.83□□□□□ -0.84
CHD9-214ENST00000565119 SLC51AQ86UW1 340 aa9.82□□□□□ -0.84
CHD9-214ENST00000565119 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
CHD9-214ENST00000565119 MED26O95402 600 aa9.81□□□□□ -0.84
CHD9-214ENST00000565119 CCINQ13939 588 aa9.81□□□□□ -0.84
CHD9-214ENST00000565119 PERM1Q5SV97 790 aa9.81□□□□□ -0.84
CHD9-214ENST00000565119 WFDC8Q8IUA0 241 aa9.81□□□□□ -0.84
CHD9-214ENST00000565119 ALDH16A1Q8IZ83 802 aa9.81□□□□□ -0.84
CHD9-214ENST00000565119 ALG2Q9H553 416 aa9.81□□□□□ -0.84
CHD9-214ENST00000565119 OAS3Q9Y6K5 1087 aaKnown RBP9.81□□□□□ -0.84
CHD9-214ENST00000565119 C21orf2O43822 256 aa9.8□□□□□ -0.84
CHD9-214ENST00000565119 TAL1P17542 331 aaPredicted RBP9.8□□□□□ -0.84
CHD9-214ENST00000565119 CCDC102BQ68D86 513 aa9.8□□□□□ -0.84
CHD9-214ENST00000565119 FRRS1LQ9P0K9 344 aa9.8□□□□□ -0.84
CHD9-214ENST00000565119 ZBTB42B2RXF5 422 aa9.79□□□□□ -0.84
CHD9-214ENST00000565119 DLL1O00548 723 aa9.79□□□□□ -0.84
CHD9-214ENST00000565119 PPP1R12BO60237 982 aaPredicted RBP9.79□□□□□ -0.84
CHD9-214ENST00000565119 ALX3O95076 343 aa9.79□□□□□ -0.84
CHD9-214ENST00000565119 TRIM50Q86XT4 487 aa9.79□□□□□ -0.84
CHD9-214ENST00000565119 AKTIPQ9H8T0 292 aa9.79□□□□□ -0.84
CHD9-214ENST00000565119 GRNP28799 593 aaKnown RBP9.78□□□□□ -0.84
CHD9-214ENST00000565119 CLDN10P78369 228 aa9.78□□□□□ -0.84
CHD9-214ENST00000565119 MAP3K6O95382 1288 aa9.76□□□□□ -0.85
CHD9-214ENST00000565119 PCSK7Q16549 785 aa9.76□□□□□ -0.85
CHD9-214ENST00000565119 ELMSAN1Q6PJG2 1045 aa9.76□□□□□ -0.85
CHD9-214ENST00000565119 TSEN2Q8NCE0 465 aaKnown RBP9.76□□□□□ -0.85
CHD9-214ENST00000565119 TTC9Q92623 222 aa9.76□□□□□ -0.85
CHD9-214ENST00000565119 ZFATQ9P243 1243 aa9.76□□□□□ -0.85
CHD9-214ENST00000565119 DMGDHQ9UI17 866 aaKnown RBP9.76□□□□□ -0.85
CHD9-214ENST00000565119 KIAA1324LA8MWY0 1029 aaPredicted RBP9.75□□□□□ -0.85
CHD9-214ENST00000565119 M0R2N6 131 aa9.75□□□□□ -0.85
CHD9-214ENST00000565119 GP2P55259 537 aaKnown RBP9.75□□□□□ -0.85
CHD9-214ENST00000565119 MLLT1Q03111 559 aaPredicted RBP9.75□□□□□ -0.85
CHD9-214ENST00000565119 HIF1AQ16665 826 aa9.75□□□□□ -0.85
CHD9-214ENST00000565119 IER5Q5VY09 327 aa9.75□□□□□ -0.85
CHD9-214ENST00000565119 TRPM4Q8TD43 1214 aa9.75□□□□□ -0.85
CHD9-214ENST00000565119 NGLY1Q96IV0 654 aa9.75□□□□□ -0.85
CHD9-214ENST00000565119 C2orf49Q9BVC5 232 aaPredicted RBP9.75□□□□□ -0.85
CHD9-214ENST00000565119 RNF114Q9Y508 228 aa9.75□□□□□ -0.85
CHD9-214ENST00000565119 F8W735 103 aaPredicted RBP9.74□□□□□ -0.85
CHD9-214ENST00000565119 DHX32Q7L7V1 743 aaKnown RBP9.74□□□□□ -0.85
CHD9-214ENST00000565119 BCS1LQ9Y276 419 aa9.74□□□□□ -0.85
CHD9-214ENST00000565119 ATP1A2P50993 1020 aa9.73□□□□□ -0.85
CHD9-214ENST00000565119 FZD5Q13467 585 aa9.73□□□□□ -0.85
CHD9-214ENST00000565119 TMEM130Q8N3G9 435 aa9.73□□□□□ -0.85
CHD9-214ENST00000565119 STAG2Q8N3U4 1231 aa9.73□□□□□ -0.85
CHD9-214ENST00000565119 TGFBR3LH3BV60 316 aa9.72□□□□□ -0.85
CHD9-214ENST00000565119 ADAMTS4O75173 837 aa9.72□□□□□ -0.85
CHD9-214ENST00000565119 TGFB1P01137 390 aa9.72□□□□□ -0.85
CHD9-214ENST00000565119 KRT25Q7Z3Z0 450 aa9.72□□□□□ -0.85
CHD9-214ENST00000565119 SMG9Q9H0W8 520 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms