RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 EZRP15311 586 aaKnown RBP7.3□□□□□ -1.24
PTPN9-204ENST00000564970 OAS2P29728 719 aaKnown RBP7.3□□□□□ -1.24
PTPN9-204ENST00000564970 HNRNPH1P31943 449 aaKnown RBP7.3□□□□□ -1.24
PTPN9-204ENST00000564970 SLC8A1P32418 973 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 LMAN1P49257 510 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 CLCN6P51797 869 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 CDR1P51861 262 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 SLFN5Q08AF3 891 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 BRD3Q15059 726 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 TPD52L1Q16890 204 aaPredicted RBP7.3□□□□□ -1.24
PTPN9-204ENST00000564970 BMP2KLQ5H9B9 411 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 OGFOD1Q8N543 542 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 SAMD3Q8N6K7 520 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 GPR161Q8N6U8 529 aaKnown RBP7.3□□□□□ -1.24
PTPN9-204ENST00000564970 PRPF38AQ8NAV1 312 aaKnown RBP7.3□□□□□ -1.24
PTPN9-204ENST00000564970 SPRYD3Q8NCJ5 442 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 PIK3R5Q8WYR1 880 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 PLEKHG4BQ96PX9 1271 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 MAF1Q9H063 256 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 ARFGAP3Q9NP61 516 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 IFT57Q9NWB7 429 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 BLOC1S6Q9UL45 172 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 ZNF215Q9UL58 517 aaPredicted RBP7.3□□□□□ -1.24
PTPN9-204ENST00000564970 ODF2LQ9ULJ1 636 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 PDZRN3Q9UPQ7 1066 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 U3KPZ7 1027 aaPredicted RBP7.3□□□□□ -1.24
PTPN9-204ENST00000564970 PRDM15P57071 1507 aaPredicted RBP7.3□□□□□ -1.24
PTPN9-204ENST00000564970 RTL1A6NKG5 1358 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 USP47Q96K76 1375 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 PTPRMP28827 1452 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 MBD5Q9P267 1494 aa7.3□□□□□ -1.24
PTPN9-204ENST00000564970 KDM5DQ9BY66 1539 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 SRGAP3O43295 1099 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 OPA1O60313 960 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 RTN3O95197 1032 aaPredicted RBP7.29□□□□□ -1.24
PTPN9-204ENST00000564970 CT47B1P0C2W7 299 aaPredicted RBP7.29□□□□□ -1.24
PTPN9-204ENST00000564970 MX1P20591 662 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 ARHGAP25P42331 645 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 NAP1L1P55209 391 aaKnown RBP7.29□□□□□ -1.24
PTPN9-204ENST00000564970 SH3BGRP55822 239 aaPredicted RBP7.29□□□□□ -1.24
PTPN9-204ENST00000564970 SESN3P58005 492 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 DRP2Q13474 957 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 IQCB1Q15051 598 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 ELF2Q15723 593 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 DBN1Q16643 649 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 ACBD5Q5T8D3 534 aaPredicted RBP7.29□□□□□ -1.24
PTPN9-204ENST00000564970 ANKRD45Q5TZF3 282 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 WDR78Q5VTH9 848 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 MICALCLQ6ZW33 695 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 SKAP1Q86WV1 359 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 ACRBPQ8NEB7 543 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 TDRD7Q8NHU6 1098 aaKnown RBP7.29□□□□□ -1.24
PTPN9-204ENST00000564970 ZFAND2BQ8WV99 257 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 HNRNPLLQ8WVV9 542 aaKnown RBP7.29□□□□□ -1.24
PTPN9-204ENST00000564970 UBXN4Q92575 508 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 JARID2Q92833 1246 aaPredicted RBP7.29□□□□□ -1.24
PTPN9-204ENST00000564970 BHMTQ93088 406 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 CCDC102AQ96A19 550 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 CCDC34Q96HJ3 373 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 GBP3Q9H0R5 595 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 ATP6V0A4Q9HBG4 840 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 GRIN2AQ12879 1464 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 GRIN2BQ13224 1484 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 RALGAPBQ86X10 1494 aa7.29□□□□□ -1.24
PTPN9-204ENST00000564970 ANKRD50Q9ULJ7 1429 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 CCDC151A5D8V7 595 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 FAM177BA6PVY3 158 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 POLR3GO15318 223 aaPredicted RBP7.28□□□□□ -1.24
PTPN9-204ENST00000564970 KIF5CO60282 957 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 FESP07332 822 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 CASTP20810 708 aaKnown RBP7.28□□□□□ -1.24
PTPN9-204ENST00000564970 ALDH1B1P30837 517 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 GSDMDP57764 484 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 IFFO1Q0D2I5 559 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 TUBB2AQ13885 445 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 TBC1D25Q3MII6 688 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 HHATQ5VTY9 493 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 ISM2Q6H9L7 571 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 NFXL1Q6ZNB6 911 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 SPATA21Q7Z572 469 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 YTHDF3Q7Z739 585 aaKnown RBP7.28□□□□□ -1.24
PTPN9-204ENST00000564970 REXO1L1PQ8IX06 675 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 FAM71BQ8TC56 605 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 MICAL1Q8TDZ2 1067 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 N4BP2L2Q92802 583 aaPredicted RBP7.28□□□□□ -1.24
PTPN9-204ENST00000564970 GTF3C6Q969F1 213 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 TEKT1Q969V4 418 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 PPP1R14BQ96C90 147 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 HOOK2Q96ED9 719 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 CDCA7LQ96GN5 454 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 INTS4Q96HW7 963 aaKnown RBP7.28□□□□□ -1.24
PTPN9-204ENST00000564970 ANKRD27Q96NW4 1050 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 MPHOSPH6Q99547 160 aaKnown RBP7.28□□□□□ -1.24
PTPN9-204ENST00000564970 TUBB2BQ9BVA1 445 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 KCNF1Q9H3M0 494 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 RGL1Q9NZL6 768 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 PYCARDQ9ULZ3 195 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.28□□□□□ -1.24
PTPN9-204ENST00000564970 ATP6V1DQ9Y5K8 247 aa7.28□□□□□ -1.24
PTPN9-204ENST00000564970 AATKQ6ZMQ8 1374 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms