RNA–Protein interactions for RNA: ENST00000564908.1

MSRB1-205, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3 BASIC

Gene MSRB1, Length 550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-205ENST00000564908 NLRP10Q86W26 655 aa16.7■□□□□ 0.26
MSRB1-205ENST00000564908 SYNE4Q8N205 404 aa16.7■□□□□ 0.26
MSRB1-205ENST00000564908 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
MSRB1-205ENST00000564908 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
MSRB1-205ENST00000564908 TOMM70O94826 608 aa16.69■□□□□ 0.26
MSRB1-205ENST00000564908 C3orf67Q6ZVT6 689 aa16.69■□□□□ 0.26
MSRB1-205ENST00000564908 PLBD2Q8NHP8 589 aa16.69■□□□□ 0.26
MSRB1-205ENST00000564908 NLRP3Q96P20 1036 aa16.69■□□□□ 0.26
MSRB1-205ENST00000564908 TAOK3Q9H2K8 898 aa16.69■□□□□ 0.26
MSRB1-205ENST00000564908 FER1L6Q2WGJ9 1857 aa16.69■□□□□ 0.26
MSRB1-205ENST00000564908 LTBP3Q9NS15 1303 aa16.69■□□□□ 0.26
MSRB1-205ENST00000564908 ZC3H4Q9UPT8 1303 aaKnown RBP16.69■□□□□ 0.26
MSRB1-205ENST00000564908 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
MSRB1-205ENST00000564908 CCDC93Q567U6 631 aa16.68■□□□□ 0.26
MSRB1-205ENST00000564908 TSPYL6Q8N831 410 aa16.68■□□□□ 0.26
MSRB1-205ENST00000564908 IBTKQ9P2D0 1353 aaPredicted RBP16.67■□□□□ 0.26
MSRB1-205ENST00000564908 RTKN2Q8IZC4 609 aa16.67■□□□□ 0.26
MSRB1-205ENST00000564908 RPGRQ92834 1020 aaKnown RBP16.67■□□□□ 0.26
MSRB1-205ENST00000564908 ZNF428Q96B54 188 aa16.67■□□□□ 0.26
MSRB1-205ENST00000564908 RBM17Q96I25 401 aaKnown RBP16.67■□□□□ 0.26
MSRB1-205ENST00000564908 CRAMP1Q96RY5 1269 aa16.67■□□□□ 0.26
MSRB1-205ENST00000564908 PHAXQ9H814 394 aaKnown RBP16.67■□□□□ 0.26
MSRB1-205ENST00000564908 TRMT112Q9UI30 125 aaKnown RBP16.67■□□□□ 0.26
MSRB1-205ENST00000564908 SALL2Q9Y467 1007 aaPredicted RBP16.67■□□□□ 0.26
MSRB1-205ENST00000564908 CACNA1SQ13698 1873 aa16.67■□□□□ 0.26
MSRB1-205ENST00000564908 HCLS1P14317 486 aaPredicted RBP16.66■□□□□ 0.26
MSRB1-205ENST00000564908 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
MSRB1-205ENST00000564908 TSR2Q969E8 191 aaKnown RBP16.66■□□□□ 0.26
MSRB1-205ENST00000564908 ISCA1Q9BUE6 129 aa16.66■□□□□ 0.26
MSRB1-205ENST00000564908 POTECB2RU33 542 aa16.65■□□□□ 0.26
MSRB1-205ENST00000564908 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
MSRB1-205ENST00000564908 HSPA6P17066 643 aa16.65■□□□□ 0.26
MSRB1-205ENST00000564908 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
MSRB1-205ENST00000564908 TCERG1O14776 1098 aaKnown RBP16.64■□□□□ 0.25
MSRB1-205ENST00000564908 VEGFAP15692 232 aaPredicted RBP16.64■□□□□ 0.25
MSRB1-205ENST00000564908 TRIM28Q13263 835 aaKnown RBP16.64■□□□□ 0.25
MSRB1-205ENST00000564908 CCDC30Q5VVM6 783 aa16.64■□□□□ 0.25
MSRB1-205ENST00000564908 CC2D2BQ6DHV5 1058 aa16.64■□□□□ 0.25
MSRB1-205ENST00000564908 RIC3Q7Z5B4 369 aa16.64■□□□□ 0.25
MSRB1-205ENST00000564908 C16orf71Q8IYS4 520 aaPredicted RBP16.64■□□□□ 0.25
MSRB1-205ENST00000564908 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
MSRB1-205ENST00000564908 ZNF277Q9NRM2 450 aaPredicted RBP16.64■□□□□ 0.25
MSRB1-205ENST00000564908 DICER1Q9UPY3 1922 aaKnown RBP16.64■□□□□ 0.25
MSRB1-205ENST00000564908 RIC1Q4ADV7 1423 aa16.63■□□□□ 0.25
MSRB1-205ENST00000564908 RBM46Q8TBY0 533 aaKnown RBP16.63■□□□□ 0.25
MSRB1-205ENST00000564908 CHMP4AQ9BY43 222 aa16.63■□□□□ 0.25
MSRB1-205ENST00000564908 IL16Q14005 1332 aa16.63■□□□□ 0.25
MSRB1-205ENST00000564908 RNF123Q5XPI4 1314 aa16.63■□□□□ 0.25
MSRB1-205ENST00000564908 SH3TC1Q8TE82 1336 aa16.63■□□□□ 0.25
MSRB1-205ENST00000564908 ARFGEF2Q9Y6D5 1785 aa16.62■□□□□ 0.25
MSRB1-205ENST00000564908 DDNO94850 711 aaPredicted RBP16.62■□□□□ 0.25
MSRB1-205ENST00000564908 WDR63Q8IWG1 891 aa16.62■□□□□ 0.25
MSRB1-205ENST00000564908 FAM89AQ96GI7 184 aa16.62■□□□□ 0.25
MSRB1-205ENST00000564908 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
MSRB1-205ENST00000564908 BBOX1O75936 387 aa16.61■□□□□ 0.25
MSRB1-205ENST00000564908 SLC51AQ86UW1 340 aa16.61■□□□□ 0.25
MSRB1-205ENST00000564908 PSMD1Q99460 953 aa16.61■□□□□ 0.25
MSRB1-205ENST00000564908 PPEF1O14829 653 aaPredicted RBP16.6■□□□□ 0.25
MSRB1-205ENST00000564908 IARSP41252 1262 aaKnown RBP16.6■□□□□ 0.25
MSRB1-205ENST00000564908 GOLGA2Q08379 1002 aa16.6■□□□□ 0.25
MSRB1-205ENST00000564908 TWISTNBQ3B726 338 aaPredicted RBP16.6■□□□□ 0.25
MSRB1-205ENST00000564908 GRIPAP1Q4V328 841 aa16.6■□□□□ 0.25
MSRB1-205ENST00000564908 CEP350Q5VT06 3117 aa16.59■□□□□ 0.25
MSRB1-205ENST00000564908 RTL5Q5HYW3 569 aaPredicted RBP16.59■□□□□ 0.25
MSRB1-205ENST00000564908 MYD88Q99836 296 aa16.59■□□□□ 0.25
MSRB1-205ENST00000564908 ATP6V0A2Q9Y487 856 aa16.59■□□□□ 0.25
MSRB1-205ENST00000564908 ABCC4O15439 1325 aa16.59■□□□□ 0.25
MSRB1-205ENST00000564908 FSTL1Q12841 308 aa16.58■□□□□ 0.24
MSRB1-205ENST00000564908 SF3B3Q15393 1217 aaKnown RBP16.58■□□□□ 0.24
MSRB1-205ENST00000564908 DDX46Q7L014 1031 aaKnown RBP16.58■□□□□ 0.24
MSRB1-205ENST00000564908 SP8Q8IXZ3 490 aa16.58■□□□□ 0.24
MSRB1-205ENST00000564908 METTL22Q9BUU2 404 aaPredicted RBP16.58■□□□□ 0.24
MSRB1-205ENST00000564908 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
MSRB1-205ENST00000564908 SNED1Q8TER0 1413 aa16.58■□□□□ 0.24
MSRB1-205ENST00000564908 ANKRD36CQ5JPF3 1778 aa16.57■□□□□ 0.24
MSRB1-205ENST00000564908 FZD9O00144 591 aa16.57■□□□□ 0.24
MSRB1-205ENST00000564908 VAMP4O75379 141 aa16.57■□□□□ 0.24
MSRB1-205ENST00000564908 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
MSRB1-205ENST00000564908 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
MSRB1-205ENST00000564908 KSR2Q6VAB6 950 aa16.57■□□□□ 0.24
MSRB1-205ENST00000564908 G2E3Q7L622 706 aa16.57■□□□□ 0.24
MSRB1-205ENST00000564908 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
MSRB1-205ENST00000564908 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
MSRB1-205ENST00000564908 PI4KAP2A4QPH2 592 aa16.56■□□□□ 0.24
MSRB1-205ENST00000564908 IRS4O14654 1257 aaPredicted RBP16.56■□□□□ 0.24
MSRB1-205ENST00000564908 GRAPQ13588 217 aa16.56■□□□□ 0.24
MSRB1-205ENST00000564908 PI4KAP1Q8N8J0 262 aa16.56■□□□□ 0.24
MSRB1-205ENST00000564908 GRAPLQ8TC17 118 aaPredicted RBP16.56■□□□□ 0.24
MSRB1-205ENST00000564908 JARID2Q92833 1246 aaPredicted RBP16.56■□□□□ 0.24
MSRB1-205ENST00000564908 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
MSRB1-205ENST00000564908 TMX4Q9H1E5 349 aaPredicted RBP16.56■□□□□ 0.24
MSRB1-205ENST00000564908 MAP3K2Q9Y2U5 619 aa16.56■□□□□ 0.24
MSRB1-205ENST00000564908 TAF1P21675 1872 aa16.55■□□□□ 0.24
MSRB1-205ENST00000564908 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
MSRB1-205ENST00000564908 APLP1P51693 650 aa16.55■□□□□ 0.24
MSRB1-205ENST00000564908 EXOSC9Q06265 439 aaKnown RBP16.55■□□□□ 0.24
MSRB1-205ENST00000564908 SMC1BQ8NDV3 1235 aa16.55■□□□□ 0.24
MSRB1-205ENST00000564908 JDP2Q8WYK2 163 aa16.55■□□□□ 0.24
MSRB1-205ENST00000564908 ZNF541Q9H0D2 1346 aa16.54■□□□□ 0.24
MSRB1-205ENST00000564908 LARGE2Q8N3Y3 721 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms