RNA–Protein interactions for RNA: ENST00000564878.5

SPIRE2-206, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 3

Gene SPIRE2, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-206ENST00000564878 DBF4Q9UBU7 674 aaPredicted RBP23.35■■□□□ 1.33
SPIRE2-206ENST00000564878 ALDH1B1P30837 517 aa23.34■■□□□ 1.33
SPIRE2-206ENST00000564878 HSP90AB3PQ58FF7 597 aa23.34■■□□□ 1.33
SPIRE2-206ENST00000564878 RIC1Q4ADV7 1423 aa23.33■■□□□ 1.33
SPIRE2-206ENST00000564878 TIAM2Q8IVF5 1701 aa23.33■■□□□ 1.33
SPIRE2-206ENST00000564878 CCDC93Q567U6 631 aa23.33■■□□□ 1.33
SPIRE2-206ENST00000564878 UTP14AQ9BVJ6 771 aaKnown RBP23.33■■□□□ 1.33
SPIRE2-206ENST00000564878 ANKRD36CQ5JPF3 1778 aa23.32■■□□□ 1.32
SPIRE2-206ENST00000564878 ELL2O00472 640 aaPredicted RBP23.32■■□□□ 1.32
SPIRE2-206ENST00000564878 TCIRG1Q13488 830 aa23.32■■□□□ 1.32
SPIRE2-206ENST00000564878 RPGRQ92834 1020 aaKnown RBP23.32■■□□□ 1.32
SPIRE2-206ENST00000564878 CHMP4AQ9BY43 222 aa23.32■■□□□ 1.32
SPIRE2-206ENST00000564878 RRAGCQ9HB90 399 aa23.32■■□□□ 1.32
SPIRE2-206ENST00000564878 GLTPD2A6NH11 291 aa23.31■■□□□ 1.32
SPIRE2-206ENST00000564878 TOMM70O94826 608 aa23.31■■□□□ 1.32
SPIRE2-206ENST00000564878 OLFM4Q6UX06 510 aa23.31■■□□□ 1.32
SPIRE2-206ENST00000564878 NLRP10Q86W26 655 aa23.31■■□□□ 1.32
SPIRE2-206ENST00000564878 PLBD2Q8NHP8 589 aa23.31■■□□□ 1.32
SPIRE2-206ENST00000564878 HYPKQ9NX55 129 aa23.31■■□□□ 1.32
SPIRE2-206ENST00000564878 DICER1Q9UPY3 1922 aaKnown RBP23.3■■□□□ 1.32
SPIRE2-206ENST00000564878 CCDC27Q2M243 656 aa23.3■■□□□ 1.32
SPIRE2-206ENST00000564878 ANKRD13DQ6ZTN6 518 aa23.3■■□□□ 1.32
SPIRE2-206ENST00000564878 C3orf67Q6ZVT6 689 aa23.3■■□□□ 1.32
SPIRE2-206ENST00000564878 C8orf58Q8NAV2 365 aa23.3■■□□□ 1.32
SPIRE2-206ENST00000564878 HOXA10P31260 410 aaPredicted RBP23.29■■□□□ 1.32
SPIRE2-206ENST00000564878 SLC10A5Q5PT55 438 aa23.29■■□□□ 1.32
SPIRE2-206ENST00000564878 WWC1Q8IX03 1113 aa23.29■■□□□ 1.32
SPIRE2-206ENST00000564878 C16orf71Q8IYS4 520 aaPredicted RBP23.29■■□□□ 1.32
SPIRE2-206ENST00000564878 NLRP3Q96P20 1036 aa23.29■■□□□ 1.32
SPIRE2-206ENST00000564878 RTKN2Q8IZC4 609 aa23.28■■□□□ 1.32
SPIRE2-206ENST00000564878 RBM17Q96I25 401 aaKnown RBP23.28■■□□□ 1.32
SPIRE2-206ENST00000564878 RNF123Q5XPI4 1314 aa23.28■■□□□ 1.32
SPIRE2-206ENST00000564878 HSPA6P17066 643 aa23.27■■□□□ 1.32
SPIRE2-206ENST00000564878 FKBP4Q02790 459 aaKnown RBP eCLIP23.27■■□□□ 1.323e-7■■■□□ 17.6
SPIRE2-206ENST00000564878 DPY19L2Q6NUT2 758 aa23.27■■□□□ 1.32
SPIRE2-206ENST00000564878 CRAMP1Q96RY5 1269 aa23.27■■□□□ 1.32
SPIRE2-206ENST00000564878 TRMT112Q9UI30 125 aaKnown RBP23.27■■□□□ 1.32
SPIRE2-206ENST00000564878 SYNE4Q8N205 404 aa23.26■■□□□ 1.31
SPIRE2-206ENST00000564878 TSR2Q969E8 191 aaKnown RBP23.26■■□□□ 1.31
SPIRE2-206ENST00000564878 ZNF428Q96B54 188 aa23.26■■□□□ 1.31
SPIRE2-206ENST00000564878 GRIPAP1Q4V328 841 aa23.25■■□□□ 1.31
SPIRE2-206ENST00000564878 TSPYL6Q8N831 410 aa23.25■■□□□ 1.31
SPIRE2-206ENST00000564878 RBM46Q8TBY0 533 aaKnown RBP23.25■■□□□ 1.31
SPIRE2-206ENST00000564878 PHAXQ9H814 394 aaKnown RBP23.25■■□□□ 1.31
SPIRE2-206ENST00000564878 ATP5J2-PTCD1G3V325 749 aa23.24■■□□□ 1.31
SPIRE2-206ENST00000564878 HCLS1P14317 486 aaPredicted RBP23.24■■□□□ 1.31
SPIRE2-206ENST00000564878 CC2D2BQ6DHV5 1058 aa23.24■■□□□ 1.31
SPIRE2-206ENST00000564878 ISCA1Q9BUE6 129 aa23.24■■□□□ 1.31
SPIRE2-206ENST00000564878 ZNF277Q9NRM2 450 aaPredicted RBP23.24■■□□□ 1.31
SPIRE2-206ENST00000564878 SH3TC1Q8TE82 1336 aa23.24■■□□□ 1.31
SPIRE2-206ENST00000564878 NPM3O75607 178 aaKnown RBP23.23■■□□□ 1.31
SPIRE2-206ENST00000564878 VEGFAP15692 232 aaPredicted RBP23.23■■□□□ 1.31
SPIRE2-206ENST00000564878 CCDC30Q5VVM6 783 aa23.23■■□□□ 1.31
SPIRE2-206ENST00000564878 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
SPIRE2-206ENST00000564878 TCERG1O14776 1098 aaKnown RBP23.22■■□□□ 1.31
SPIRE2-206ENST00000564878 PPEF1O14829 653 aaPredicted RBP23.22■■□□□ 1.31
SPIRE2-206ENST00000564878 GOLGA2Q08379 1002 aa23.22■■□□□ 1.31
SPIRE2-206ENST00000564878 RIC3Q7Z5B4 369 aa23.22■■□□□ 1.31
SPIRE2-206ENST00000564878 IL16Q14005 1332 aa23.22■■□□□ 1.31
SPIRE2-206ENST00000564878 SNED1Q8TER0 1413 aa23.22■■□□□ 1.31
SPIRE2-206ENST00000564878 SLC51AQ86UW1 340 aa23.21■■□□□ 1.31
SPIRE2-206ENST00000564878 LAMB2P55268 1798 aa23.21■■□□□ 1.31
SPIRE2-206ENST00000564878 WDR90Q96KV7 1748 aa23.2■■□□□ 1.3
SPIRE2-206ENST00000564878 POTECB2RU33 542 aa23.2■■□□□ 1.3
SPIRE2-206ENST00000564878 FAM9BQ8IZU0 186 aa23.2■■□□□ 1.3
SPIRE2-206ENST00000564878 PSMD1Q99460 953 aa23.2■■□□□ 1.3
SPIRE2-206ENST00000564878 ABCC4O15439 1325 aa23.19■■□□□ 1.3
SPIRE2-206ENST00000564878 DDNO94850 711 aaPredicted RBP23.19■■□□□ 1.3
SPIRE2-206ENST00000564878 IARSP41252 1262 aaKnown RBP23.19■■□□□ 1.3
SPIRE2-206ENST00000564878 FAM89AQ96GI7 184 aa23.19■■□□□ 1.3
SPIRE2-206ENST00000564878 FSTL1Q12841 308 aa23.18■■□□□ 1.3
SPIRE2-206ENST00000564878 TRIM28Q13263 835 aaKnown RBP23.18■■□□□ 1.3
SPIRE2-206ENST00000564878 TWISTNBQ3B726 338 aaPredicted RBP23.17■■□□□ 1.3
SPIRE2-206ENST00000564878 DDX60Q8IY21 1712 aaKnown RBP23.16■■□□□ 1.3
SPIRE2-206ENST00000564878 RTL5Q5HYW3 569 aaPredicted RBP23.16■■□□□ 1.3
SPIRE2-206ENST00000564878 DDX46Q7L014 1031 aaKnown RBP23.16■■□□□ 1.3
SPIRE2-206ENST00000564878 WDR63Q8IWG1 891 aa23.16■■□□□ 1.3
SPIRE2-206ENST00000564878 SMC1BQ8NDV3 1235 aa23.16■■□□□ 1.3
SPIRE2-206ENST00000564878 MYD88Q99836 296 aa23.16■■□□□ 1.3
SPIRE2-206ENST00000564878 TMX4Q9H1E5 349 aaPredicted RBP23.16■■□□□ 1.3
SPIRE2-206ENST00000564878 ATP6V0A2Q9Y487 856 aa23.16■■□□□ 1.3
SPIRE2-206ENST00000564878 BBOX1O75936 387 aa23.15■■□□□ 1.3
SPIRE2-206ENST00000564878 DDX58O95786 925 aaKnown RBP23.15■■□□□ 1.3
SPIRE2-206ENST00000564878 APLP1P51693 650 aa23.15■■□□□ 1.3
SPIRE2-206ENST00000564878 STK31Q9BXU1 1019 aa23.15■■□□□ 1.3
SPIRE2-206ENST00000564878 ZNF541Q9H0D2 1346 aa23.14■■□□□ 1.3
SPIRE2-206ENST00000564878 FANCIQ9NVI1 1328 aa23.14■■□□□ 1.3
SPIRE2-206ENST00000564878 FZD9O00144 591 aa23.13■■□□□ 1.29
SPIRE2-206ENST00000564878 IRS4O14654 1257 aaPredicted RBP23.13■■□□□ 1.29
SPIRE2-206ENST00000564878 GRAPQ13588 217 aa23.13■■□□□ 1.29
SPIRE2-206ENST00000564878 GRAPLQ8TC17 118 aaPredicted RBP23.13■■□□□ 1.29
SPIRE2-206ENST00000564878 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
SPIRE2-206ENST00000564878 METTL22Q9BUU2 404 aaPredicted RBP23.13■■□□□ 1.29
SPIRE2-206ENST00000564878 TAF1P21675 1872 aa23.12■■□□□ 1.29
SPIRE2-206ENST00000564878 SF3B3Q15393 1217 aaKnown RBP23.12■■□□□ 1.29
SPIRE2-206ENST00000564878 SP8Q8IXZ3 490 aa23.12■■□□□ 1.29
SPIRE2-206ENST00000564878 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
SPIRE2-206ENST00000564878 MAP3K2Q9Y2U5 619 aa23.12■■□□□ 1.29
SPIRE2-206ENST00000564878 CEP350Q5VT06 3117 aa23.12■■□□□ 1.29
SPIRE2-206ENST00000564878 LARGE2Q8N3Y3 721 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms