RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 KLHDC4Q8TBB5 520 aa24.26■■□□□ 1.47
MAP1LC3B-206ENST00000564844 NAP1L2Q9ULW6 460 aaPredicted RBP24.26■■□□□ 1.47
MAP1LC3B-206ENST00000564844 GLRX3O76003 335 aaKnown RBP24.26■■□□□ 1.47
MAP1LC3B-206ENST00000564844 TPM3P06753 285 aa24.26■■□□□ 1.47
MAP1LC3B-206ENST00000564844 LEO1Q8WVC0 666 aaPredicted RBP24.26■■□□□ 1.47
MAP1LC3B-206ENST00000564844 RUFY2Q8WXA3 655 aa24.26■■□□□ 1.47
MAP1LC3B-206ENST00000564844 PGBD1Q96JS3 809 aa24.26■■□□□ 1.47
MAP1LC3B-206ENST00000564844 KIF20AO95235 890 aa24.25■■□□□ 1.47
MAP1LC3B-206ENST00000564844 CWF19L2Q2TBE0 894 aaKnown RBP24.25■■□□□ 1.47
MAP1LC3B-206ENST00000564844 C9orf78Q9NZ63 289 aaPredicted RBP24.25■■□□□ 1.47
MAP1LC3B-206ENST00000564844 ZNF215Q9UL58 517 aaPredicted RBP24.25■■□□□ 1.47
MAP1LC3B-206ENST00000564844 CEP135Q66GS9 1140 aa24.25■■□□□ 1.47
MAP1LC3B-206ENST00000564844 TLR7Q9NYK1 1049 aaKnown RBP24.24■■□□□ 1.47
MAP1LC3B-206ENST00000564844 TRERF1Q96PN7 1200 aa24.24■■□□□ 1.47
MAP1LC3B-206ENST00000564844 OGFRQ9NZT2 677 aa24.24■■□□□ 1.47
MAP1LC3B-206ENST00000564844 SMTNL1A8MU46 457 aa24.24■■□□□ 1.47
MAP1LC3B-206ENST00000564844 ZSCAN31Q96LW9 406 aaPredicted RBP24.24■■□□□ 1.47
MAP1LC3B-206ENST00000564844 LGR6Q9HBX8 967 aa24.24■■□□□ 1.47
MAP1LC3B-206ENST00000564844 SH2B1Q9NRF2 756 aaPredicted RBP24.24■■□□□ 1.47
MAP1LC3B-206ENST00000564844 GOLGA6L19H0YKK7 550 aa24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 LMOD2Q6P5Q4 547 aa24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 BLOC1S2Q6QNY1 142 aa24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 A0A0D9SFI3 127 aa24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 HSP90B1P14625 803 aaKnown RBP24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 POLA2Q14181 598 aa24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 NECTIN1Q15223 517 aa24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 C11orf57Q6ZUT1 292 aaPredicted RBP24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 ZBTB9Q96C00 473 aa24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 ECHDC1Q9NTX5 307 aa24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 CCDC171Q6TFL3 1326 aa24.23■■□□□ 1.47
MAP1LC3B-206ENST00000564844 AIMP1Q12904 312 aaKnown RBP24.22■■□□□ 1.47
MAP1LC3B-206ENST00000564844 SLC27A2O14975 620 aa24.22■■□□□ 1.47
MAP1LC3B-206ENST00000564844 GUCY1B3Q02153 619 aa24.22■■□□□ 1.47
MAP1LC3B-206ENST00000564844 DNAAF4Q8WXU2 420 aa24.22■■□□□ 1.47
MAP1LC3B-206ENST00000564844 FSD1Q9BTV5 496 aa24.22■■□□□ 1.47
MAP1LC3B-206ENST00000564844 ELF2Q15723 593 aa24.21■■□□□ 1.47
MAP1LC3B-206ENST00000564844 H3BQV1 296 aa24.21■■□□□ 1.47
MAP1LC3B-206ENST00000564844 IFFO2Q5TF58 517 aa24.21■■□□□ 1.47
MAP1LC3B-206ENST00000564844 BBXQ8WY36 941 aaPredicted RBP24.21■■□□□ 1.47
MAP1LC3B-206ENST00000564844 AOX1Q06278 1338 aa24.2■■□□□ 1.46
MAP1LC3B-206ENST00000564844 VGLL3A8MV65 326 aa24.2■■□□□ 1.46
MAP1LC3B-206ENST00000564844 IL17RAQ96F46 866 aa24.2■■□□□ 1.46
MAP1LC3B-206ENST00000564844 SKILP12757 684 aa24.2■■□□□ 1.46
MAP1LC3B-206ENST00000564844 DIP2CQ9Y2E4 1556 aa24.2■■□□□ 1.46
MAP1LC3B-206ENST00000564844 ZNF589Q86UQ0 364 aaPredicted RBP24.19■■□□□ 1.46
MAP1LC3B-206ENST00000564844 PLA2G4DQ86XP0 818 aa24.19■■□□□ 1.46
MAP1LC3B-206ENST00000564844 BRF1Q92994 677 aa24.19■■□□□ 1.46
MAP1LC3B-206ENST00000564844 FMNL2Q96PY5 1086 aa24.19■■□□□ 1.46
MAP1LC3B-206ENST00000564844 BECN2A8MW95 431 aa24.19■■□□□ 1.46
MAP1LC3B-206ENST00000564844 KMT5BQ4FZB7 885 aa24.19■■□□□ 1.46
MAP1LC3B-206ENST00000564844 BEND3Q5T5X7 828 aa24.18■■□□□ 1.46
MAP1LC3B-206ENST00000564844 FEZ1Q99689 392 aa24.18■■□□□ 1.46
MAP1LC3B-206ENST00000564844 CLSTN2Q9H4D0 955 aa24.18■■□□□ 1.46
MAP1LC3B-206ENST00000564844 ROBO2Q9HCK4 1378 aa24.18■■□□□ 1.46
MAP1LC3B-206ENST00000564844 PTPN14Q15678 1187 aa24.18■■□□□ 1.46
MAP1LC3B-206ENST00000564844 GORABQ5T7V8 394 aa24.18■■□□□ 1.46
MAP1LC3B-206ENST00000564844 PRAMEF22A3QJZ6 481 aa24.17■■□□□ 1.46
MAP1LC3B-206ENST00000564844 CCDC129Q6ZRS4 1044 aa24.17■■□□□ 1.46
MAP1LC3B-206ENST00000564844 EAF2Q96CJ1 260 aaPredicted RBP24.17■■□□□ 1.46
MAP1LC3B-206ENST00000564844 SCAND2PQ9GZW5 306 aaPredicted RBP24.17■■□□□ 1.46
MAP1LC3B-206ENST00000564844 PPP6R1Q9UPN7 881 aa24.17■■□□□ 1.46
MAP1LC3B-206ENST00000564844 PREX1Q8TCU6 1659 aa24.17■■□□□ 1.46
MAP1LC3B-206ENST00000564844 LRRC8AQ8IWT6 810 aa24.17■■□□□ 1.46
MAP1LC3B-206ENST00000564844 DDX41Q9UJV9 622 aaKnown RBP24.16■■□□□ 1.46
MAP1LC3B-206ENST00000564844 TOB2Q14106 344 aaPredicted RBP24.16■■□□□ 1.46
MAP1LC3B-206ENST00000564844 PROSER3Q2NL68 480 aa24.16■■□□□ 1.46
MAP1LC3B-206ENST00000564844 KIF18AQ8NI77 898 aa24.16■■□□□ 1.46
MAP1LC3B-206ENST00000564844 CEP170BQ9Y4F5 1589 aaPredicted RBP24.16■■□□□ 1.46
MAP1LC3B-206ENST00000564844 DLC1Q96QB1 1528 aa24.16■■□□□ 1.46
MAP1LC3B-206ENST00000564844 NPHP3Q7Z494 1330 aa24.15■■□□□ 1.46
MAP1LC3B-206ENST00000564844 MAP3K2Q9Y2U5 619 aa24.15■■□□□ 1.46
MAP1LC3B-206ENST00000564844 CCDC69A6NI79 296 aa24.15■■□□□ 1.46
MAP1LC3B-206ENST00000564844 DDX19AQ9NUU7 478 aaKnown RBP24.15■■□□□ 1.46
MAP1LC3B-206ENST00000564844 A2ML1A8K2U0 1454 aa24.15■■□□□ 1.46
MAP1LC3B-206ENST00000564844 PDCP20941 246 aa24.14■■□□□ 1.46
MAP1LC3B-206ENST00000564844 FBXO38Q6PIJ6 1188 aa24.14■■□□□ 1.46
MAP1LC3B-206ENST00000564844 MPRIPQ6WCQ1 1025 aa24.14■■□□□ 1.46
MAP1LC3B-206ENST00000564844 SLFN14P0C7P3 912 aa24.14■■□□□ 1.45
MAP1LC3B-206ENST00000564844 SLFNL1Q499Z3 407 aa24.14■■□□□ 1.45
MAP1LC3B-206ENST00000564844 SEC62Q99442 399 aaKnown RBP24.14■■□□□ 1.45
MAP1LC3B-206ENST00000564844 PTPN21Q16825 1174 aa24.14■■□□□ 1.45
MAP1LC3B-206ENST00000564844 ABTB2Q8N961 1025 aa24.14■■□□□ 1.45
MAP1LC3B-206ENST00000564844 LRRN4CLQ8ND94 238 aa24.14■■□□□ 1.45
MAP1LC3B-206ENST00000564844 TDRD7Q8NHU6 1098 aaKnown RBP24.14■■□□□ 1.45
MAP1LC3B-206ENST00000564844 GPATCH3Q96I76 525 aa24.14■■□□□ 1.45
MAP1LC3B-206ENST00000564844 CCT2P78371 535 aaKnown RBP24.13■■□□□ 1.45
MAP1LC3B-206ENST00000564844 ISM2Q6H9L7 571 aa24.13■■□□□ 1.45
MAP1LC3B-206ENST00000564844 MAP4K1Q92918 833 aa24.13■■□□□ 1.45
MAP1LC3B-206ENST00000564844 EVI5LQ96CN4 794 aa24.13■■□□□ 1.45
MAP1LC3B-206ENST00000564844 SETD1BQ9UPS6 1966 aaKnown RBP24.13■■□□□ 1.45
MAP1LC3B-206ENST00000564844 GTF3C6Q969F1 213 aa24.13■■□□□ 1.45
MAP1LC3B-206ENST00000564844 PAXBP1Q9Y5B6 917 aa24.13■■□□□ 1.45
MAP1LC3B-206ENST00000564844 PSMA5P28066 241 aa24.12■■□□□ 1.45
MAP1LC3B-206ENST00000564844 TTC21AQ8NDW8 1320 aa24.12■■□□□ 1.45
MAP1LC3B-206ENST00000564844 RPS6KB1P23443 525 aa24.12■■□□□ 1.45
MAP1LC3B-206ENST00000564844 CCAR1Q8IX12 1150 aaKnown RBP24.12■■□□□ 1.45
MAP1LC3B-206ENST00000564844 PIP4K2AP48426 406 aaPredicted RBP24.12■■□□□ 1.45
MAP1LC3B-206ENST00000564844 TM6SF1Q9BZW5 370 aa24.12■■□□□ 1.45
MAP1LC3B-206ENST00000564844 HSP90AB4PQ58FF6 505 aa24.11■■□□□ 1.45
MAP1LC3B-206ENST00000564844 PEAK1Q9H792 1746 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms