RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	NLRP10	Q86W26	655 aa		12.39	□□□□□ -0.43
SIN3A-205	ENST00000564778	SPON1	Q9HCB6	807 aa		12.39	□□□□□ -0.43
SIN3A-205	ENST00000564778	CWC25	Q9NXE8	425 aa	Predicted RBP	12.39	□□□□□ -0.43
SIN3A-205	ENST00000564778	SRP68	Q9UHB9	627 aa	Known RBP	12.39	□□□□□ -0.43
SIN3A-205	ENST00000564778	CASP7	P55210	303 aa		12.38	□□□□□ -0.43
SIN3A-205	ENST00000564778	PARP10	Q53GL7	1025 aa		12.38	□□□□□ -0.43
SIN3A-205	ENST00000564778	USPL1	Q5W0Q7	1092 aa		12.38	□□□□□ -0.43
SIN3A-205	ENST00000564778	SMIM5	Q71RC9	77 aa		12.38	□□□□□ -0.43
SIN3A-205	ENST00000564778	ARX	Q96QS3	562 aa		12.38	□□□□□ -0.43
SIN3A-205	ENST00000564778	LAMB2	P55268	1798 aa		12.38	□□□□□ -0.43
SIN3A-205	ENST00000564778	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.37	□□□□□ -0.43
SIN3A-205	ENST00000564778	UBTFL1	P0CB47	393 aa	Predicted RBP	12.37	□□□□□ -0.43
SIN3A-205	ENST00000564778	GYS1	P13807	737 aa		12.37	□□□□□ -0.43
SIN3A-205	ENST00000564778	COL23A1	Q86Y22	540 aa	Predicted RBP	12.37	□□□□□ -0.43
SIN3A-205	ENST00000564778	PPP4R2	Q9NY27	417 aa		12.37	□□□□□ -0.43
SIN3A-205	ENST00000564778	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.37	□□□□□ -0.43
SIN3A-205	ENST00000564778		H7C1W4	665 aa		12.36	□□□□□ -0.43
SIN3A-205	ENST00000564778	GNAI2	P04899	355 aa		12.36	□□□□□ -0.43
SIN3A-205	ENST00000564778	PCCA	P05165	728 aa	Predicted RBP	12.36	□□□□□ -0.43
SIN3A-205	ENST00000564778	GPT	P24298	496 aa		12.36	□□□□□ -0.43
SIN3A-205	ENST00000564778	HDAC5	Q9UQL6	1122 aa		12.36	□□□□□ -0.43
SIN3A-205	ENST00000564778	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
SIN3A-205	ENST00000564778	PCDHB15	Q9Y5E8	787 aa		12.36	□□□□□ -0.43
SIN3A-205	ENST00000564778	CDHR2	Q9BYE9	1310 aa		12.36	□□□□□ -0.43
SIN3A-205	ENST00000564778	CARMIL3	Q8ND23	1372 aa		12.35	□□□□□ -0.43
SIN3A-205	ENST00000564778	NTSR2	O95665	410 aa		12.35	□□□□□ -0.43
SIN3A-205	ENST00000564778	TBC1D9B	Q66K14	1250 aa		12.35	□□□□□ -0.43
SIN3A-205	ENST00000564778	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.35	□□□□□ -0.43
SIN3A-205	ENST00000564778	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.35	□□□□□ -0.43
SIN3A-205	ENST00000564778	RIC1	Q4ADV7	1423 aa		12.35	□□□□□ -0.43
SIN3A-205	ENST00000564778	NRXN2	Q9P2S2	1712 aa		12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	MTX1	Q13505	466 aa		12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	CEP85	Q6P2H3	762 aa		12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	UBE3B	Q7Z3V4	1068 aa		12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	KAZALD1	Q96I82	304 aa		12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	PLA2G12B	Q9BX93	195 aa		12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	MTFR1L	Q9H019	292 aa		12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	C1orf115	Q9H7X2	142 aa		12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	LRRFIP2	Q9Y608	721 aa	Known RBP	12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	SH3TC1	Q8TE82	1336 aa		12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	DDX60	Q8IY21	1712 aa	Known RBP	12.34	□□□□□ -0.43
SIN3A-205	ENST00000564778	MYH3	P11055	1940 aa		12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	ZBTB7A	O95365	584 aa		12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	HDAC1	Q13547	482 aa	Predicted RBP	12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	NFIX	Q14938	502 aa		12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	RABL6	Q3YEC7	729 aa	Predicted RBP	12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	SUSD4	Q5VX71	490 aa		12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	PPP1R42	Q7Z4L9	355 aa		12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	ANKRD44	Q8N8A2	993 aa		12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	SUCLG2	Q96I99	432 aa		12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	SETDB2	Q96T68	719 aa		12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	UTP14A	Q9BVJ6	771 aa	Known RBP	12.33	□□□□□ -0.44
SIN3A-205	ENST00000564778	TM4SF1	P30408	202 aa		12.32	□□□□□ -0.44
SIN3A-205	ENST00000564778	SIRT2	Q8IXJ6	389 aa		12.32	□□□□□ -0.44
SIN3A-205	ENST00000564778	NLGN1	Q8N2Q7	840 aa		12.32	□□□□□ -0.44
SIN3A-205	ENST00000564778	SLC16A10	Q8TF71	515 aa		12.32	□□□□□ -0.44
SIN3A-205	ENST00000564778	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.32	□□□□□ -0.44
SIN3A-205	ENST00000564778	NYX	Q9GZU5	481 aa		12.32	□□□□□ -0.44
SIN3A-205	ENST00000564778	TRMT112	Q9UI30	125 aa	Known RBP	12.32	□□□□□ -0.44
SIN3A-205	ENST00000564778	KDM2B	Q8NHM5	1336 aa		12.32	□□□□□ -0.44
SIN3A-205	ENST00000564778	HSP90B1	P14625	803 aa	Known RBP	12.31	□□□□□ -0.44
SIN3A-205	ENST00000564778	DDR1	Q08345	913 aa		12.31	□□□□□ -0.44
SIN3A-205	ENST00000564778	FAM89A	Q96GI7	184 aa		12.31	□□□□□ -0.44
SIN3A-205	ENST00000564778	CCDC136	Q96JN2	1154 aa		12.31	□□□□□ -0.44
SIN3A-205	ENST00000564778	BICC1	Q9H694	974 aa	Known RBP	12.31	□□□□□ -0.44
SIN3A-205	ENST00000564778	ABCC12	Q96J65	1359 aa		12.3	□□□□□ -0.44
SIN3A-205	ENST00000564778	POLRMT	O00411	1230 aa	Known RBP	12.3	□□□□□ -0.44
SIN3A-205	ENST00000564778	IRS4	O14654	1257 aa	Predicted RBP	12.3	□□□□□ -0.44
SIN3A-205	ENST00000564778	FOXO4	P98177	505 aa		12.3	□□□□□ -0.44
SIN3A-205	ENST00000564778	ATP8B2	P98198	1209 aa		12.3	□□□□□ -0.44
SIN3A-205	ENST00000564778	POLA2	Q14181	598 aa		12.3	□□□□□ -0.44
SIN3A-205	ENST00000564778	EPHA10	Q5JZY3	1008 aa		12.3	□□□□□ -0.44
SIN3A-205	ENST00000564778	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.3	□□□□□ -0.44
SIN3A-205	ENST00000564778	SSH3	Q8TE77	659 aa		12.3	□□□□□ -0.44
SIN3A-205	ENST00000564778	RTL9	Q8NET4	1388 aa		12.3	□□□□□ -0.44
SIN3A-205	ENST00000564778	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.29	□□□□□ -0.44
SIN3A-205	ENST00000564778	HMMR	O75330	724 aa		12.29	□□□□□ -0.44
SIN3A-205	ENST00000564778	SLC10A5	Q5PT55	438 aa		12.29	□□□□□ -0.44
SIN3A-205	ENST00000564778	B4GALNT3	Q6L9W6	998 aa		12.29	□□□□□ -0.44
SIN3A-205	ENST00000564778	TPTE2	Q6XPS3	522 aa		12.29	□□□□□ -0.44
SIN3A-205	ENST00000564778	BICDL1	Q6ZP65	573 aa		12.29	□□□□□ -0.44
SIN3A-205	ENST00000564778	JARID2	Q92833	1246 aa	Predicted RBP	12.29	□□□□□ -0.44
SIN3A-205	ENST00000564778	RWDD1	Q9H446	243 aa	Predicted RBP	12.29	□□□□□ -0.44
SIN3A-205	ENST00000564778	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.29	□□□□□ -0.44
SIN3A-205	ENST00000564778	PNMA6E	A0A0J9YXQ4	647 aa		12.28	□□□□□ -0.44
SIN3A-205	ENST00000564778	MSH5	O43196	834 aa		12.28	□□□□□ -0.44
SIN3A-205	ENST00000564778	PDE8A	O60658	829 aa		12.28	□□□□□ -0.44
SIN3A-205	ENST00000564778	CSF1R	P07333	972 aa		12.28	□□□□□ -0.44
SIN3A-205	ENST00000564778	PTGER2	P43116	358 aa		12.28	□□□□□ -0.44
SIN3A-205	ENST00000564778	CTSW	P56202	376 aa		12.28	□□□□□ -0.44
SIN3A-205	ENST00000564778	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.28	□□□□□ -0.44
SIN3A-205	ENST00000564778	SYNE4	Q8N205	404 aa		12.28	□□□□□ -0.44
SIN3A-205	ENST00000564778	CNBD1	Q8NA66	436 aa		12.28	□□□□□ -0.44
SIN3A-205	ENST00000564778	SRGAP3	O43295	1099 aa		12.27	□□□□□ -0.45
SIN3A-205	ENST00000564778	IGHD	P01880	384 aa		12.27	□□□□□ -0.45
SIN3A-205	ENST00000564778	SERPINB2	P05120	415 aa		12.27	□□□□□ -0.45
SIN3A-205	ENST00000564778	MMP10	P09238	476 aa		12.27	□□□□□ -0.45
SIN3A-205	ENST00000564778	POLD1	P28340	1107 aa		12.27	□□□□□ -0.45
SIN3A-205	ENST00000564778	ERFE	Q4G0M1	354 aa		12.27	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms