RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 ANKRD24Q8TF21 1146 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 SIL1Q9H173 461 aa18.53■□□□□ 0.56
GTF3C1-205ENST00000564747 ZKSCAN1P17029 563 aaPredicted RBP18.52■□□□□ 0.56
GTF3C1-205ENST00000564747 SH2B1Q9NRF2 756 aaPredicted RBP18.52■□□□□ 0.56
GTF3C1-205ENST00000564747 VPS37CA5D8V6 355 aaPredicted RBP18.52■□□□□ 0.55
GTF3C1-205ENST00000564747 RBM10P98175 930 aaKnown RBP18.52■□□□□ 0.55
GTF3C1-205ENST00000564747 KLHDC4Q8TBB5 520 aa18.52■□□□□ 0.55
GTF3C1-205ENST00000564747 MAP4K1Q92918 833 aa18.52■□□□□ 0.55
GTF3C1-205ENST00000564747 ZNF830Q96NB3 372 aaPredicted RBP18.52■□□□□ 0.55
GTF3C1-205ENST00000564747 ORAI2Q96SN7 254 aa18.52■□□□□ 0.55
GTF3C1-205ENST00000564747 TPCN1Q9ULQ1 816 aa18.52■□□□□ 0.55
GTF3C1-205ENST00000564747 AXIN2Q9Y2T1 843 aa18.52■□□□□ 0.55
GTF3C1-205ENST00000564747 GIMAP6Q6P9H5 292 aa18.51■□□□□ 0.55
GTF3C1-205ENST00000564747 BOLA2Q9H3K6 86 aa18.51■□□□□ 0.55
GTF3C1-205ENST00000564747 HDAC5Q9UQL6 1122 aa18.51■□□□□ 0.55
GTF3C1-205ENST00000564747 ADGRL3Q9HAR2 1447 aa18.51■□□□□ 0.55
GTF3C1-205ENST00000564747 LETM1O95202 739 aaPredicted RBP18.51■□□□□ 0.55
GTF3C1-205ENST00000564747 PDIA6Q15084 440 aa18.5■□□□□ 0.55
GTF3C1-205ENST00000564747 ADCY5O95622 1261 aa18.5■□□□□ 0.55
GTF3C1-205ENST00000564747 DDX21Q9NR30 783 aaKnown RBP eCLIP18.5■□□□□ 0.55
GTF3C1-205ENST00000564747 A0A0D9SFI3 127 aa18.49■□□□□ 0.55
GTF3C1-205ENST00000564747 SLC27A2O14975 620 aa18.49■□□□□ 0.55
GTF3C1-205ENST00000564747 IGKV5-2P06315 115 aa18.49■□□□□ 0.55
GTF3C1-205ENST00000564747 ANKLE2Q86XL3 938 aa18.49■□□□□ 0.55
GTF3C1-205ENST00000564747 TCEANC2Q96MN5 208 aa18.49■□□□□ 0.55
GTF3C1-205ENST00000564747 UTYO14607 1347 aa18.49■□□□□ 0.55
GTF3C1-205ENST00000564747 UQCRHLA0A096LP55 91 aa18.49■□□□□ 0.55
GTF3C1-205ENST00000564747 UQCRHP07919 91 aa18.49■□□□□ 0.55
GTF3C1-205ENST00000564747 TAF6LQ9Y6J9 622 aa18.49■□□□□ 0.55
GTF3C1-205ENST00000564747 DDX58O95786 925 aaKnown RBP18.48■□□□□ 0.55
GTF3C1-205ENST00000564747 KIAA2012Q0VF49 1180 aa18.48■□□□□ 0.55
GTF3C1-205ENST00000564747 SLC39A6Q13433 755 aa18.48■□□□□ 0.55
GTF3C1-205ENST00000564747 FAM13BQ9NYF5 915 aa18.48■□□□□ 0.55
GTF3C1-205ENST00000564747 NCAPD2Q15021 1401 aa18.48■□□□□ 0.55
GTF3C1-205ENST00000564747 CHD2O14647 1828 aaKnown RBP18.48■□□□□ 0.55
GTF3C1-205ENST00000564747 LARP1BQ659C4 914 aaKnown RBP18.47■□□□□ 0.55
GTF3C1-205ENST00000564747 RIC3Q7Z5B4 369 aa18.47■□□□□ 0.55
GTF3C1-205ENST00000564747 FSD1Q9BTV5 496 aa18.47■□□□□ 0.55
GTF3C1-205ENST00000564747 FUCA2Q9BTY2 467 aa18.47■□□□□ 0.55
GTF3C1-205ENST00000564747 HIP1O00291 1037 aa18.47■□□□□ 0.55
GTF3C1-205ENST00000564747 MYL6BP14649 208 aa18.47■□□□□ 0.55
GTF3C1-205ENST00000564747 FERMT3Q86UX7 667 aa18.47■□□□□ 0.55
GTF3C1-205ENST00000564747 MAP7D2Q96T17 732 aa18.47■□□□□ 0.55
GTF3C1-205ENST00000564747 TTC12Q9H892 705 aaPredicted RBP18.47■□□□□ 0.55
GTF3C1-205ENST00000564747 KDM4AO75164 1064 aa18.46■□□□□ 0.55
GTF3C1-205ENST00000564747 PLCB2Q00722 1185 aa18.46■□□□□ 0.55
GTF3C1-205ENST00000564747 EPHA10Q5JZY3 1008 aa18.46■□□□□ 0.55
GTF3C1-205ENST00000564747 FAM173BQ6P4H8 233 aa18.46■□□□□ 0.55
GTF3C1-205ENST00000564747 EDC3Q96F86 508 aaKnown RBP18.46■□□□□ 0.55
GTF3C1-205ENST00000564747 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
GTF3C1-205ENST00000564747 PSMA5P28066 241 aa18.45■□□□□ 0.54
GTF3C1-205ENST00000564747 CDC37L1Q7L3B6 337 aa18.45■□□□□ 0.54
GTF3C1-205ENST00000564747 ZNF589Q86UQ0 364 aaPredicted RBP18.45■□□□□ 0.54
GTF3C1-205ENST00000564747 JARID2Q92833 1246 aaPredicted RBP18.45■□□□□ 0.54
GTF3C1-205ENST00000564747 SNRKQ9NRH2 765 aa18.45■□□□□ 0.54
GTF3C1-205ENST00000564747 CHMP3Q9Y3E7 222 aa18.45■□□□□ 0.54
GTF3C1-205ENST00000564747 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
GTF3C1-205ENST00000564747 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
GTF3C1-205ENST00000564747 BLOC1S2Q6QNY1 142 aa18.44■□□□□ 0.54
GTF3C1-205ENST00000564747 TTC6Q86TZ1 520 aa18.44■□□□□ 0.54
GTF3C1-205ENST00000564747 NEURL1BA8MQ27 555 aa18.44■□□□□ 0.54
GTF3C1-205ENST00000564747 AP5Z1O43299 807 aa18.44■□□□□ 0.54
GTF3C1-205ENST00000564747 LARP1Q6PKG0 1096 aaKnown RBP18.44■□□□□ 0.54
GTF3C1-205ENST00000564747 SASS6Q6UVJ0 657 aa18.44■□□□□ 0.54
GTF3C1-205ENST00000564747 NPHP4O75161 1426 aaPredicted RBP18.44■□□□□ 0.54
GTF3C1-205ENST00000564747 XAGE3Q8WTP9 111 aa18.43■□□□□ 0.54
GTF3C1-205ENST00000564747 GCKRQ14397 625 aa18.43■□□□□ 0.54
GTF3C1-205ENST00000564747 COPS6Q7L5N1 327 aa18.43■□□□□ 0.54
GTF3C1-205ENST00000564747 C17orf53Q8N3J3 647 aaPredicted RBP18.43■□□□□ 0.54
GTF3C1-205ENST00000564747 MYD88Q99836 296 aa18.43■□□□□ 0.54
GTF3C1-205ENST00000564747 RPS6KB1P23443 525 aa18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 NEXNQ0ZGT2 675 aa18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 TOB2Q14106 344 aaPredicted RBP18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 RNF20Q5VTR2 975 aa18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 STK3Q13188 491 aa18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 NFATC2IPQ8NCF5 419 aa18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 MED23Q9ULK4 1368 aa18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 PIP4K2AP48426 406 aaPredicted RBP18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 KRT85P78386 507 aa18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 DNTTIP2Q5QJE6 756 aaKnown RBP18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 NDUFB9Q9Y6M9 179 aa18.42■□□□□ 0.54
GTF3C1-205ENST00000564747 ZC3H6P61129 1189 aaKnown RBP18.41■□□□□ 0.54
GTF3C1-205ENST00000564747 NOLC1Q14978 699 aaKnown RBP eCLIP18.41■□□□□ 0.54
GTF3C1-205ENST00000564747 DYNC1I1O14576 645 aa18.41■□□□□ 0.54
GTF3C1-205ENST00000564747 TAF5LO75529 589 aa18.41■□□□□ 0.54
GTF3C1-205ENST00000564747 LIG1P18858 919 aa18.41■□□□□ 0.54
GTF3C1-205ENST00000564747 CHGBP05060 677 aa18.4■□□□□ 0.54
GTF3C1-205ENST00000564747 ANKRD1Q15327 319 aa18.4■□□□□ 0.54
GTF3C1-205ENST00000564747 CAMK4Q16566 473 aa18.4■□□□□ 0.54
GTF3C1-205ENST00000564747 TFIP11Q9UBB9 837 aaKnown RBP18.4■□□□□ 0.54
GTF3C1-205ENST00000564747 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
GTF3C1-205ENST00000564747 METTL22Q9BUU2 404 aaPredicted RBP18.4■□□□□ 0.54
GTF3C1-205ENST00000564747 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
GTF3C1-205ENST00000564747 SLIT3O75094 1523 aa18.39■□□□□ 0.53
GTF3C1-205ENST00000564747 PDCP20941 246 aa18.39■□□□□ 0.53
GTF3C1-205ENST00000564747 KRT28Q7Z3Y7 464 aa18.39■□□□□ 0.53
GTF3C1-205ENST00000564747 DBNLQ9UJU6 430 aaKnown RBP18.39■□□□□ 0.53
GTF3C1-205ENST00000564747 ERBB3P21860 1342 aa18.39■□□□□ 0.53
GTF3C1-205ENST00000564747 CCDC192P0DO97 292 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms