RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 NUTM1Q86Y26 1132 aa12.79□□□□□ -0.36
CDH1-206ENST00000564676 TTLL6Q8N841 843 aa12.79□□□□□ -0.36
CDH1-206ENST00000564676 PHAXQ9H814 394 aaKnown RBP12.79□□□□□ -0.36
CDH1-206ENST00000564676 UBN2Q6ZU65 1347 aa12.79□□□□□ -0.36
CDH1-206ENST00000564676 UTP14AQ9BVJ6 771 aaKnown RBP12.78□□□□□ -0.36
CDH1-206ENST00000564676 ANKRD31Q8N7Z5 1873 aa12.77□□□□□ -0.37
CDH1-206ENST00000564676 ERFEQ4G0M1 354 aa12.77□□□□□ -0.37
CDH1-206ENST00000564676 CNKSR1Q969H4 720 aa12.77□□□□□ -0.37
CDH1-206ENST00000564676 MASTLQ96GX5 879 aa12.77□□□□□ -0.37
CDH1-206ENST00000564676 ZNF521Q96K83 1311 aa12.77□□□□□ -0.37
CDH1-206ENST00000564676 BRCA1P38398 1863 aaKnown RBP12.76□□□□□ -0.37
CDH1-206ENST00000564676 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
CDH1-206ENST00000564676 VAMP4O75379 141 aa12.76□□□□□ -0.37
CDH1-206ENST00000564676 DDX58O95786 925 aaKnown RBP12.76□□□□□ -0.37
CDH1-206ENST00000564676 SRGNP10124 158 aa12.76□□□□□ -0.37
CDH1-206ENST00000564676 STYK1Q6J9G0 422 aa12.76□□□□□ -0.37
CDH1-206ENST00000564676 NLRP10Q86W26 655 aa12.76□□□□□ -0.37
CDH1-206ENST00000564676 E9PSI1 815 aa12.75□□□□□ -0.37
CDH1-206ENST00000564676 NTSR2O95665 410 aa12.75□□□□□ -0.37
CDH1-206ENST00000564676 NPR1P16066 1061 aa12.75□□□□□ -0.37
CDH1-206ENST00000564676 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
CDH1-206ENST00000564676 IBTKQ9P2D0 1353 aaPredicted RBP12.75□□□□□ -0.37
CDH1-206ENST00000564676 TRMT112Q9UI30 125 aaKnown RBP12.75□□□□□ -0.37
CDH1-206ENST00000564676 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
CDH1-206ENST00000564676 KLRG2A4D1S0 409 aaPredicted RBP12.74□□□□□ -0.37
CDH1-206ENST00000564676 NLRP3Q96P20 1036 aa12.74□□□□□ -0.37
CDH1-206ENST00000564676 MYD88Q99836 296 aa12.74□□□□□ -0.37
CDH1-206ENST00000564676 ISCA1Q9BUE6 129 aa12.74□□□□□ -0.37
CDH1-206ENST00000564676 ARFGEF1Q9Y6D6 1849 aa12.74□□□□□ -0.37
CDH1-206ENST00000564676 SH3TC1Q8TE82 1336 aa12.73□□□□□ -0.37
CDH1-206ENST00000564676 C21orf2O43822 256 aa12.73□□□□□ -0.37
CDH1-206ENST00000564676 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
CDH1-206ENST00000564676 KSR2Q6VAB6 950 aa12.73□□□□□ -0.37
CDH1-206ENST00000564676 G2E3Q7L622 706 aa12.73□□□□□ -0.37
CDH1-206ENST00000564676 RPGRQ92834 1020 aaKnown RBP12.73□□□□□ -0.37
CDH1-206ENST00000564676 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
CDH1-206ENST00000564676 DLEC1Q9Y238 1755 aa12.73□□□□□ -0.37
CDH1-206ENST00000564676 ANKRD36CQ5JPF3 1778 aa12.72□□□□□ -0.37
CDH1-206ENST00000564676 RNF123Q5XPI4 1314 aa12.72□□□□□ -0.37
CDH1-206ENST00000564676 PI4KAP2A4QPH2 592 aa12.72□□□□□ -0.37
CDH1-206ENST00000564676 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
CDH1-206ENST00000564676 SLFN5Q08AF3 891 aa12.72□□□□□ -0.37
CDH1-206ENST00000564676 TRIM28Q13263 835 aaKnown RBP12.72□□□□□ -0.37
CDH1-206ENST00000564676 SLC10A5Q5PT55 438 aa12.72□□□□□ -0.37
CDH1-206ENST00000564676 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
CDH1-206ENST00000564676 PI4KAP1Q8N8J0 262 aa12.72□□□□□ -0.37
CDH1-206ENST00000564676 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
CDH1-206ENST00000564676 METTL22Q9BUU2 404 aaPredicted RBP12.72□□□□□ -0.37
CDH1-206ENST00000564676 GOLGB1Q14789 3259 aaKnown RBP12.72□□□□□ -0.37
CDH1-206ENST00000564676 UTRNP46939 3433 aa12.72□□□□□ -0.37
CDH1-206ENST00000564676 COL11A2P13942 1736 aaPredicted RBP12.71□□□□□ -0.37
CDH1-206ENST00000564676 CACNA1FO60840 1977 aa12.71□□□□□ -0.37
CDH1-206ENST00000564676 HCLS1P14317 486 aaPredicted RBP12.71□□□□□ -0.37
CDH1-206ENST00000564676 NEXNQ0ZGT2 675 aa12.71□□□□□ -0.37
CDH1-206ENST00000564676 FLIIQ13045 1269 aa12.71□□□□□ -0.37
CDH1-206ENST00000564676 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
CDH1-206ENST00000564676 CRY2Q49AN0 593 aa12.71□□□□□ -0.37
CDH1-206ENST00000564676 RTL5Q5HYW3 569 aaPredicted RBP12.71□□□□□ -0.37
CDH1-206ENST00000564676 SYNE4Q8N205 404 aa12.71□□□□□ -0.37
CDH1-206ENST00000564676 ZNF784Q8NCA9 323 aaPredicted RBP12.71□□□□□ -0.37
CDH1-206ENST00000564676 RBM17Q96I25 401 aaKnown RBP12.71□□□□□ -0.37
CDH1-206ENST00000564676 SLX4Q8IY92 1834 aa12.7□□□□□ -0.38
CDH1-206ENST00000564676 RASSF7Q02833 373 aa12.7□□□□□ -0.38
CDH1-206ENST00000564676 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
CDH1-206ENST00000564676 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
CDH1-206ENST00000564676 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
CDH1-206ENST00000564676 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
CDH1-206ENST00000564676 FAM89AQ96GI7 184 aa12.7□□□□□ -0.38
CDH1-206ENST00000564676 CWC25Q9NXE8 425 aaPredicted RBP12.7□□□□□ -0.38
CDH1-206ENST00000564676 ARFGEF2Q9Y6D5 1785 aa12.7□□□□□ -0.38
CDH1-206ENST00000564676 RIC1Q4ADV7 1423 aa12.7□□□□□ -0.38
CDH1-206ENST00000564676 HOXA10P31260 410 aaPredicted RBP12.69□□□□□ -0.38
CDH1-206ENST00000564676 CCDC191Q8NCU4 936 aa12.69□□□□□ -0.38
CDH1-206ENST00000564676 RNF181Q9P0P0 153 aa12.69□□□□□ -0.38
CDH1-206ENST00000564676 TNRC6CQ9HCJ0 1690 aaKnown RBP12.69□□□□□ -0.38
CDH1-206ENST00000564676 CACNA1SQ13698 1873 aa12.69□□□□□ -0.38
CDH1-206ENST00000564676 ADCY9O60503 1353 aa12.69□□□□□ -0.38
CDH1-206ENST00000564676 IRS4O14654 1257 aaPredicted RBP12.68□□□□□ -0.38
CDH1-206ENST00000564676 HSP90B1P14625 803 aaKnown RBP12.68□□□□□ -0.38
CDH1-206ENST00000564676 HNRNPUQ00839 825 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDH1-206ENST00000564676 CCDC93Q567U6 631 aa12.68□□□□□ -0.38
CDH1-206ENST00000564676 ZBTB38Q8NAP3 1195 aaPredicted RBP12.68□□□□□ -0.38
CDH1-206ENST00000564676 DNAAF4Q8WXU2 420 aa12.68□□□□□ -0.38
CDH1-206ENST00000564676 CRAMP1Q96RY5 1269 aa12.68□□□□□ -0.38
CDH1-206ENST00000564676 NFKBIEO00221 500 aa12.67□□□□□ -0.38
CDH1-206ENST00000564676 PCCAP05165 728 aaPredicted RBP12.67□□□□□ -0.38
CDH1-206ENST00000564676 LMNB1P20700 586 aa12.67□□□□□ -0.38
CDH1-206ENST00000564676 DDX46Q7L014 1031 aaKnown RBP12.67□□□□□ -0.38
CDH1-206ENST00000564676 ZNF526Q8TF50 670 aaPredicted RBP12.67□□□□□ -0.38
CDH1-206ENST00000564676 C7orf43Q8WVR3 580 aa12.67□□□□□ -0.38
CDH1-206ENST00000564676 JARID2Q92833 1246 aaPredicted RBP12.67□□□□□ -0.38
CDH1-206ENST00000564676 TMX4Q9H1E5 349 aaPredicted RBP12.67□□□□□ -0.38
CDH1-206ENST00000564676 TAOK3Q9H2K8 898 aa12.67□□□□□ -0.38
CDH1-206ENST00000564676 NEURL1BA8MQ27 555 aa12.66□□□□□ -0.38
CDH1-206ENST00000564676 IGKV5-2P06315 115 aa12.66□□□□□ -0.38
CDH1-206ENST00000564676 CWF19L2Q2TBE0 894 aaKnown RBP12.66□□□□□ -0.38
CDH1-206ENST00000564676 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
CDH1-206ENST00000564676 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
CDH1-206ENST00000564676 RTKN2Q8IZC4 609 aa12.66□□□□□ -0.38
CDH1-206ENST00000564676 SBF1O95248 1867 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms