RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 UTP14AQ9BVJ6 771 aaKnown RBP15.9■□□□□ 0.14
GTF3C1-204ENST00000564664 WDR90Q96KV7 1748 aa15.9■□□□□ 0.14
GTF3C1-204ENST00000564664 UBN2Q6ZU65 1347 aa15.9■□□□□ 0.14
GTF3C1-204ENST00000564664 COPS6Q7L5N1 327 aa15.89■□□□□ 0.13
GTF3C1-204ENST00000564664 SYNE4Q8N205 404 aa15.89■□□□□ 0.13
GTF3C1-204ENST00000564664 L3MBTL3Q96JM7 780 aaPredicted RBP15.89■□□□□ 0.13
GTF3C1-204ENST00000564664 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
GTF3C1-204ENST00000564664 DDNO94850 711 aaPredicted RBP15.88■□□□□ 0.13
GTF3C1-204ENST00000564664 CALD1Q05682 793 aaKnown RBP15.88■□□□□ 0.13
GTF3C1-204ENST00000564664 KLRG1Q96E93 195 aa15.88■□□□□ 0.13
GTF3C1-204ENST00000564664 TMX4Q9H1E5 349 aaPredicted RBP15.88■□□□□ 0.13
GTF3C1-204ENST00000564664 ZNF277Q9NRM2 450 aaPredicted RBP15.88■□□□□ 0.13
GTF3C1-204ENST00000564664 TIAM2Q8IVF5 1701 aa15.88■□□□□ 0.13
GTF3C1-204ENST00000564664 IARSP41252 1262 aaKnown RBP15.87■□□□□ 0.13
GTF3C1-204ENST00000564664 TCIRG1Q13488 830 aa15.87■□□□□ 0.13
GTF3C1-204ENST00000564664 CHMP4AQ9BY43 222 aa15.87■□□□□ 0.13
GTF3C1-204ENST00000564664 VPS33BQ9H267 617 aa15.87■□□□□ 0.13
GTF3C1-204ENST00000564664 LAS1LQ9Y4W2 734 aaKnown RBP15.87■□□□□ 0.13
GTF3C1-204ENST00000564664 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
GTF3C1-204ENST00000564664 FZD9O00144 591 aa15.86■□□□□ 0.13
GTF3C1-204ENST00000564664 PROSER3Q2NL68 480 aa15.86■□□□□ 0.13
GTF3C1-204ENST00000564664 JMYQ8N9B5 988 aa15.86■□□□□ 0.13
GTF3C1-204ENST00000564664 XAGE3Q8WTP9 111 aa15.86■□□□□ 0.13
GTF3C1-204ENST00000564664 JDP2Q8WYK2 163 aa15.86■□□□□ 0.13
GTF3C1-204ENST00000564664 DBF4Q9UBU7 674 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-204ENST00000564664 CACNA1SQ13698 1873 aa15.85■□□□□ 0.13
GTF3C1-204ENST00000564664 BBOX1O75936 387 aa15.85■□□□□ 0.13
GTF3C1-204ENST00000564664 AIMP1Q12904 312 aaKnown RBP15.85■□□□□ 0.13
GTF3C1-204ENST00000564664 CHADLQ6NUI6 762 aa15.85■□□□□ 0.13
GTF3C1-204ENST00000564664 HYPKQ9NX55 129 aa15.85■□□□□ 0.13
GTF3C1-204ENST00000564664 ANXA1P04083 346 aa15.84■□□□□ 0.13
GTF3C1-204ENST00000564664 ZNF853P0CG23 659 aa15.84■□□□□ 0.13
GTF3C1-204ENST00000564664 HDGFL1Q5TGJ6 251 aa15.84■□□□□ 0.13
GTF3C1-204ENST00000564664 OLFM4Q6UX06 510 aa15.84■□□□□ 0.13
GTF3C1-204ENST00000564664 ANKRD13DQ6ZTN6 518 aa15.84■□□□□ 0.13
GTF3C1-204ENST00000564664 NLRP10Q86W26 655 aa15.84■□□□□ 0.13
GTF3C1-204ENST00000564664 GPC2Q8N158 579 aa15.84■□□□□ 0.13
GTF3C1-204ENST00000564664 PLBD2Q8NHP8 589 aa15.84■□□□□ 0.13
GTF3C1-204ENST00000564664 PPEF1O14829 653 aaPredicted RBP15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 ZEB1P37275 1124 aaPredicted RBP15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 GNAI1P63096 354 aa15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 IFFO2Q5TF58 517 aa15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 LDHDQ86WU2 507 aa15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 NECTIN2Q92692 538 aa15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 TAF1DQ9H5J8 278 aaPredicted RBP15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 IFT57Q9NWB7 429 aa15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 CHPF2Q9P2E5 772 aa15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 ATP6V0A2Q9Y487 856 aa15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 SNED1Q8TER0 1413 aa15.83■□□□□ 0.12
GTF3C1-204ENST00000564664 APAF1O14727 1248 aa15.82■□□□□ 0.12
GTF3C1-204ENST00000564664 EIF6P56537 245 aaKnown RBP15.82■□□□□ 0.12
GTF3C1-204ENST00000564664 DUSP27Q5VZP5 1158 aa15.82■□□□□ 0.12
GTF3C1-204ENST00000564664 TMC4Q7Z404 712 aa15.82■□□□□ 0.12
GTF3C1-204ENST00000564664 PNMA8AQ86V59 439 aaPredicted RBP15.82■□□□□ 0.12
GTF3C1-204ENST00000564664 SUPT20HQ8NEM7 779 aa15.82■□□□□ 0.12
GTF3C1-204ENST00000564664 TRMT112Q9UI30 125 aaKnown RBP15.82■□□□□ 0.12
GTF3C1-204ENST00000564664 HACL1Q9UJ83 578 aa15.82■□□□□ 0.12
GTF3C1-204ENST00000564664 SH3TC1Q8TE82 1336 aa15.82■□□□□ 0.12
GTF3C1-204ENST00000564664 SCN4AP35499 1836 aa15.82■□□□□ 0.12
GTF3C1-204ENST00000564664 HTRA3P83110 453 aa15.81■□□□□ 0.12
GTF3C1-204ENST00000564664 TRIM28Q13263 835 aaKnown RBP15.81■□□□□ 0.12
GTF3C1-204ENST00000564664 KRT24Q2M2I5 525 aa15.81■□□□□ 0.12
GTF3C1-204ENST00000564664 SP8Q8IXZ3 490 aa15.81■□□□□ 0.12
GTF3C1-204ENST00000564664 MBIPQ9NS73 344 aa15.81■□□□□ 0.12
GTF3C1-204ENST00000564664 ZNF541Q9H0D2 1346 aa15.8■□□□□ 0.12
GTF3C1-204ENST00000564664 C3orf67Q6ZVT6 689 aa15.8■□□□□ 0.12
GTF3C1-204ENST00000564664 DDX46Q7L014 1031 aaKnown RBP15.8■□□□□ 0.12
GTF3C1-204ENST00000564664 LARGE2Q8N3Y3 721 aa15.8■□□□□ 0.12
GTF3C1-204ENST00000564664 RTFDC1Q9BY42 306 aaPredicted RBP15.8■□□□□ 0.12
GTF3C1-204ENST00000564664 CREBZFQ9NS37 354 aa15.8■□□□□ 0.12
GTF3C1-204ENST00000564664 HSP90B1P14625 803 aaKnown RBP15.79■□□□□ 0.12
GTF3C1-204ENST00000564664 EPHX2P34913 555 aa15.79■□□□□ 0.12
GTF3C1-204ENST00000564664 ISCA1Q9BUE6 129 aa15.79■□□□□ 0.12
GTF3C1-204ENST00000564664 ABCC4O15439 1325 aa15.78■□□□□ 0.12
GTF3C1-204ENST00000564664 HCLS1P14317 486 aaPredicted RBP15.78■□□□□ 0.12
GTF3C1-204ENST00000564664 GRAPQ13588 217 aa15.78■□□□□ 0.12
GTF3C1-204ENST00000564664 NCBP3Q53F19 620 aaKnown RBP15.78■□□□□ 0.12
GTF3C1-204ENST00000564664 GRAPLQ8TC17 118 aaPredicted RBP15.78■□□□□ 0.12
GTF3C1-204ENST00000564664 NIM1KQ8IY84 436 aa15.77■□□□□ 0.12
GTF3C1-204ENST00000564664 MPNDQ8N594 471 aa15.77■□□□□ 0.12
GTF3C1-204ENST00000564664 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
GTF3C1-204ENST00000564664 PASKQ96RG2 1323 aa15.76■□□□□ 0.11
GTF3C1-204ENST00000564664 TCERG1O14776 1098 aaKnown RBP15.76■□□□□ 0.11
GTF3C1-204ENST00000564664 PPIP5K2O43314 1243 aa15.76■□□□□ 0.11
GTF3C1-204ENST00000564664 POTEIP0CG38 1075 aa15.76■□□□□ 0.11
GTF3C1-204ENST00000564664 POTEJP0CG39 1038 aa15.76■□□□□ 0.11
GTF3C1-204ENST00000564664 LMOD1P29536 600 aaPredicted RBP15.76■□□□□ 0.11
GTF3C1-204ENST00000564664 GOLGA2Q08379 1002 aa15.76■□□□□ 0.11
GTF3C1-204ENST00000564664 SF3B3Q15393 1217 aaKnown RBP15.76■□□□□ 0.11
GTF3C1-204ENST00000564664 CCDC27Q2M243 656 aa15.76■□□□□ 0.11
GTF3C1-204ENST00000564664 DPP8Q6V1X1 898 aaPredicted RBP15.76■□□□□ 0.11
GTF3C1-204ENST00000564664 ITGBL1O95965 494 aaPredicted RBP15.75■□□□□ 0.11
GTF3C1-204ENST00000564664 EAPPQ56P03 285 aaPredicted RBP15.75■□□□□ 0.11
GTF3C1-204ENST00000564664 CCDC30Q5VVM6 783 aa15.75■□□□□ 0.11
GTF3C1-204ENST00000564664 RIC3Q7Z5B4 369 aa15.75■□□□□ 0.11
GTF3C1-204ENST00000564664 ZNRF3Q9ULT6 936 aa15.75■□□□□ 0.11
GTF3C1-204ENST00000564664 GJA3Q9Y6H8 435 aa15.75■□□□□ 0.11
GTF3C1-204ENST00000564664 ANKRD36CQ5JPF3 1778 aa15.75■□□□□ 0.11
GTF3C1-204ENST00000564664 FAM89AQ96GI7 184 aa15.74■□□□□ 0.11
GTF3C1-204ENST00000564664 TMEM88BA6NKF7 163 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms