RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 CNTNAP4Q9C0A0 1308 aa11.35□□□□□ -0.59
PKM-212ENST00000564440 DDX11L8A8MPP1 907 aa11.35□□□□□ -0.59
PKM-212ENST00000564440 PDIA6Q15084 440 aa11.35□□□□□ -0.59
PKM-212ENST00000564440 GRPEL1Q9HAV7 217 aa11.35□□□□□ -0.59
PKM-212ENST00000564440 C9orf78Q9NZ63 289 aaPredicted RBP11.35□□□□□ -0.59
PKM-212ENST00000564440 HOXB7P09629 217 aa11.34□□□□□ -0.59
PKM-212ENST00000564440 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
PKM-212ENST00000564440 SLC4A9Q96Q91 983 aa11.34□□□□□ -0.59
PKM-212ENST00000564440 SRGAP3O43295 1099 aa11.34□□□□□ -0.59
PKM-212ENST00000564440 HSCBQ8IWL3 235 aa11.34□□□□□ -0.59
PKM-212ENST00000564440 DNAAF4Q8WXU2 420 aa11.34□□□□□ -0.59
PKM-212ENST00000564440 TMOD3Q9NYL9 352 aa11.34□□□□□ -0.59
PKM-212ENST00000564440 ISY1Q9ULR0 285 aaKnown RBP11.34□□□□□ -0.59
PKM-212ENST00000564440 ERBB4Q15303 1308 aa11.34□□□□□ -0.59
PKM-212ENST00000564440 ESPNB1AK53 854 aa11.33□□□□□ -0.6
PKM-212ENST00000564440 CHD1LQ86WJ1 897 aa11.33□□□□□ -0.6
PKM-212ENST00000564440 TRIM44Q96DX7 344 aaPredicted RBP11.33□□□□□ -0.6
PKM-212ENST00000564440 UBTFL1P0CB47 393 aaPredicted RBP11.33□□□□□ -0.6
PKM-212ENST00000564440 EPHA10Q5JZY3 1008 aa11.33□□□□□ -0.6
PKM-212ENST00000564440 UBE3BQ7Z3V4 1068 aa11.33□□□□□ -0.6
PKM-212ENST00000564440 PPP1R42Q7Z4L9 355 aa11.33□□□□□ -0.6
PKM-212ENST00000564440 ADCY9O60503 1353 aa11.33□□□□□ -0.6
PKM-212ENST00000564440 SURF6O75683 361 aaKnown RBP11.33□□□□□ -0.6
PKM-212ENST00000564440 SRCIN1Q9C0H9 1055 aa11.33□□□□□ -0.6
PKM-212ENST00000564440 CHGBP05060 677 aa11.32□□□□□ -0.6
PKM-212ENST00000564440 INTS3Q68E01 1043 aaKnown RBP11.32□□□□□ -0.6
PKM-212ENST00000564440 DBF4Q9UBU7 674 aaPredicted RBP11.32□□□□□ -0.6
PKM-212ENST00000564440 PALLDQ8WX93 1383 aa11.32□□□□□ -0.6
PKM-212ENST00000564440 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
PKM-212ENST00000564440 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
PKM-212ENST00000564440 FOXD4L1Q9NU39 408 aa11.32□□□□□ -0.6
PKM-212ENST00000564440 BAG6P46379 1132 aa11.31□□□□□ -0.6
PKM-212ENST00000564440 OS9Q13438 667 aaPredicted RBP11.31□□□□□ -0.6
PKM-212ENST00000564440 ATG3Q9NT62 314 aa11.31□□□□□ -0.6
PKM-212ENST00000564440 RIC1Q4ADV7 1423 aa11.31□□□□□ -0.6
PKM-212ENST00000564440 BICDL1Q6ZP65 573 aa11.3□□□□□ -0.6
PKM-212ENST00000564440 BRCA1P38398 1863 aaKnown RBP11.3□□□□□ -0.6
PKM-212ENST00000564440 GNAI2P04899 355 aa11.3□□□□□ -0.6
PKM-212ENST00000564440 BEND3Q5T5X7 828 aa11.3□□□□□ -0.6
PKM-212ENST00000564440 PROM2Q8N271 834 aa11.3□□□□□ -0.6
PKM-212ENST00000564440 ZNF594Q96JF6 807 aaPredicted RBP11.3□□□□□ -0.6
PKM-212ENST00000564440 FMNL2Q96PY5 1086 aa11.3□□□□□ -0.6
PKM-212ENST00000564440 NUP98P52948 1817 aa11.3□□□□□ -0.6
PKM-212ENST00000564440 SLC51AQ86UW1 340 aa11.3□□□□□ -0.6
PKM-212ENST00000564440 SMC5Q8IY18 1101 aa11.3□□□□□ -0.6
PKM-212ENST00000564440 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
PKM-212ENST00000564440 BICC1Q9H694 974 aaKnown RBP11.3□□□□□ -0.6
PKM-212ENST00000564440 ZBTB1Q9Y2K1 713 aa11.3□□□□□ -0.6
PKM-212ENST00000564440 SNRPA1P09661 255 aaKnown RBP11.29□□□□□ -0.6
PKM-212ENST00000564440 GSPT1P15170 499 aaKnown RBP11.29□□□□□ -0.6
PKM-212ENST00000564440 HLFQ16534 295 aa11.29□□□□□ -0.6
PKM-212ENST00000564440 ARHGAP45Q92619 1136 aa11.29□□□□□ -0.6
PKM-212ENST00000564440 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
PKM-212ENST00000564440 TEX13AQ9BXU3 409 aaPredicted RBP11.29□□□□□ -0.6
PKM-212ENST00000564440 SNAP23O00161 211 aa11.29□□□□□ -0.6
PKM-212ENST00000564440 NUCB1Q02818 461 aa11.29□□□□□ -0.6
PKM-212ENST00000564440 ANKRD13DQ6ZTN6 518 aa11.29□□□□□ -0.6
PKM-212ENST00000564440 RILPL2Q969X0 211 aa11.29□□□□□ -0.6
PKM-212ENST00000564440 EDC3Q96F86 508 aaKnown RBP11.29□□□□□ -0.6
PKM-212ENST00000564440 ADRA2BP18089 450 aa11.28□□□□□ -0.6
PKM-212ENST00000564440 KAZALD1Q96I82 304 aa11.28□□□□□ -0.6
PKM-212ENST00000564440 PTPRCP08575 1304 aa11.28□□□□□ -0.6
PKM-212ENST00000564440 HDAC1Q13547 482 aaPredicted RBP11.28□□□□□ -0.6
PKM-212ENST00000564440 SLFNL1Q499Z3 407 aa11.28□□□□□ -0.6
PKM-212ENST00000564440 GBP4Q96PP9 640 aa11.28□□□□□ -0.6
PKM-212ENST00000564440 CCDC8Q9H0W5 538 aaPredicted RBP11.28□□□□□ -0.6
PKM-212ENST00000564440 CENPFP49454 3210 aa11.28□□□□□ -0.6
PKM-212ENST00000564440 ATP10DQ9P241 1426 aa11.28□□□□□ -0.6
PKM-212ENST00000564440 NOL8Q76FK4 1167 aaKnown RBP11.27□□□□□ -0.6
PKM-212ENST00000564440 ANKRD44Q8N8A2 993 aa11.27□□□□□ -0.6
PKM-212ENST00000564440 AFDNP55196 1824 aaKnown RBP11.27□□□□□ -0.6
PKM-212ENST00000564440 A0A087WZG4 1122 aa11.27□□□□□ -0.61
PKM-212ENST00000564440 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.61
PKM-212ENST00000564440 SKOR2Q2VWA4 1001 aaPredicted RBP11.27□□□□□ -0.61
PKM-212ENST00000564440 AMIGO3Q86WK7 504 aa11.27□□□□□ -0.61
PKM-212ENST00000564440 DDX21Q9NR30 783 aaKnown RBP eCLIP11.27□□□□□ -0.61
PKM-212ENST00000564440 PHF14O94880 888 aa11.27□□□□□ -0.61
PKM-212ENST00000564440 KSR2Q6VAB6 950 aa11.27□□□□□ -0.61
PKM-212ENST00000564440 TNPO1Q92973 898 aaKnown RBP11.27□□□□□ -0.61
PKM-212ENST00000564440 TLR7Q9NYK1 1049 aaKnown RBP11.27□□□□□ -0.61
PKM-212ENST00000564440 CCT4P50991 539 aaKnown RBP11.26□□□□□ -0.61
PKM-212ENST00000564440 PLEKHM2Q8IWE5 1019 aa11.26□□□□□ -0.61
PKM-212ENST00000564440 SNX21Q969T3 373 aa11.26□□□□□ -0.61
PKM-212ENST00000564440 CIZ1Q9ULV3 898 aaPredicted RBP11.26□□□□□ -0.61
PKM-212ENST00000564440 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 LARP6Q9BRS8 491 aaKnown RBP11.25□□□□□ -0.61
PKM-212ENST00000564440 CHMP4AQ9BY43 222 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 IL25Q9H293 177 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 TRIM37O94972 964 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 PTMSP20962 102 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 RBM25P49756 843 aaKnown RBP11.25□□□□□ -0.61
PKM-212ENST00000564440 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
PKM-212ENST00000564440 TXNRD1Q16881 649 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 GAS2L3Q86XJ1 694 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 DDIT3P35638 169 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 DCTPP1Q9H773 170 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 WWC3Q9ULE0 1092 aa11.25□□□□□ -0.61
PKM-212ENST00000564440 PXDNLA1KZ92 1463 aa11.24□□□□□ -0.61
PKM-212ENST00000564440 WTIPA6NIX2 430 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms