RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
VAC14-204ENST00000563662 CCDC93Q567U6 631 aa13.03□□□□□ -0.32
VAC14-204ENST00000563662 SUSD4Q5VX71 490 aa13.03□□□□□ -0.32
VAC14-204ENST00000563662 RPGRQ92834 1020 aaKnown RBP13.03□□□□□ -0.32
VAC14-204ENST00000563662 IBTKQ9P2D0 1353 aaPredicted RBP13.03□□□□□ -0.32
VAC14-204ENST00000563662 GLTPD2A6NH11 291 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 NFKBIEO00221 500 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 HOXA10P31260 410 aaPredicted RBP13.02□□□□□ -0.33
VAC14-204ENST00000563662 TCIRG1Q13488 830 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 CRY2Q49AN0 593 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 ERFEQ4G0M1 354 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 SLC10A5Q5PT55 438 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 DUSP27Q5VZP5 1158 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 LRP10Q7Z4F1 713 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 NECTIN2Q92692 538 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.33
VAC14-204ENST00000563662 MRS2Q9HD23 443 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 MBIPQ9NS73 344 aa13.02□□□□□ -0.33
VAC14-204ENST00000563662 HSP90B1P14625 803 aaKnown RBP13.01□□□□□ -0.33
VAC14-204ENST00000563662 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
VAC14-204ENST00000563662 HSPA6P17066 643 aa13.01□□□□□ -0.33
VAC14-204ENST00000563662 RASSF7Q02833 373 aa13.01□□□□□ -0.33
VAC14-204ENST00000563662 NUTM1Q86Y26 1132 aa13.01□□□□□ -0.33
VAC14-204ENST00000563662 PLBD2Q8NHP8 589 aa13.01□□□□□ -0.33
VAC14-204ENST00000563662 RBM46Q8TBY0 533 aaKnown RBP13.01□□□□□ -0.33
VAC14-204ENST00000563662 C7orf43Q8WVR3 580 aa13.01□□□□□ -0.33
VAC14-204ENST00000563662 CRAMP1Q96RY5 1269 aa13.01□□□□□ -0.33
VAC14-204ENST00000563662 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
VAC14-204ENST00000563662 FSTL1Q12841 308 aa13□□□□□ -0.33
VAC14-204ENST00000563662 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
VAC14-204ENST00000563662 RRAGCQ9HB90 399 aa13□□□□□ -0.33
VAC14-204ENST00000563662 NMRK2Q9NPI5 230 aa13□□□□□ -0.33
VAC14-204ENST00000563662 CHPF2Q9P2E5 772 aa13□□□□□ -0.33
VAC14-204ENST00000563662 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
VAC14-204ENST00000563662 NTSR2O95665 410 aa12.99□□□□□ -0.33
VAC14-204ENST00000563662 DDX58O95786 925 aaKnown RBP12.99□□□□□ -0.33
VAC14-204ENST00000563662 ANXA1P04083 346 aa12.99□□□□□ -0.33
VAC14-204ENST00000563662 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
VAC14-204ENST00000563662 PROSER3Q2NL68 480 aa12.99□□□□□ -0.33
VAC14-204ENST00000563662 NLRP10Q86W26 655 aa12.99□□□□□ -0.33
VAC14-204ENST00000563662 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
VAC14-204ENST00000563662 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
VAC14-204ENST00000563662 IL16Q14005 1332 aa12.98□□□□□ -0.33
VAC14-204ENST00000563662 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
VAC14-204ENST00000563662 BBOX1O75936 387 aa12.98□□□□□ -0.33
VAC14-204ENST00000563662 TRIM28Q13263 835 aaKnown RBP12.98□□□□□ -0.33
VAC14-204ENST00000563662 KRT24Q2M2I5 525 aa12.98□□□□□ -0.33
VAC14-204ENST00000563662 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
VAC14-204ENST00000563662 SCN7AQ01118 1682 aa12.97□□□□□ -0.33
VAC14-204ENST00000563662 APLP1P51693 650 aa12.97□□□□□ -0.33
VAC14-204ENST00000563662 RIC3Q7Z5B4 369 aa12.97□□□□□ -0.33
VAC14-204ENST00000563662 WWC1Q8IX03 1113 aa12.97□□□□□ -0.33
VAC14-204ENST00000563662 SMC1BQ8NDV3 1235 aa12.97□□□□□ -0.33
VAC14-204ENST00000563662 JDP2Q8WYK2 163 aa12.97□□□□□ -0.33
VAC14-204ENST00000563662 PSMD1Q99460 953 aa12.97□□□□□ -0.33
VAC14-204ENST00000563662 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
VAC14-204ENST00000563662 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.33
VAC14-204ENST00000563662 KIAA1551Q9HCM1 1747 aa12.96□□□□□ -0.33
VAC14-204ENST00000563662 ELL2O00472 640 aaPredicted RBP12.96□□□□□ -0.33
VAC14-204ENST00000563662 DDX46Q7L014 1031 aaKnown RBP12.96□□□□□ -0.33
VAC14-204ENST00000563662 TMC4Q7Z404 712 aa12.96□□□□□ -0.33
VAC14-204ENST00000563662 WDR63Q8IWG1 891 aa12.96□□□□□ -0.33
VAC14-204ENST00000563662 SYNE4Q8N205 404 aa12.96□□□□□ -0.33
VAC14-204ENST00000563662 STK31Q9BXU1 1019 aa12.96□□□□□ -0.33
VAC14-204ENST00000563662 IQCA1LA6NCM1 817 aa12.95□□□□□ -0.34
VAC14-204ENST00000563662 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
VAC14-204ENST00000563662 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
VAC14-204ENST00000563662 PRELPP51888 382 aa12.95□□□□□ -0.34
VAC14-204ENST00000563662 CCDC184Q52MB2 194 aa12.95□□□□□ -0.34
VAC14-204ENST00000563662 MIER1Q8N108 512 aa12.95□□□□□ -0.34
VAC14-204ENST00000563662 SUPT20HQ8NEM7 779 aa12.95□□□□□ -0.34
VAC14-204ENST00000563662 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
VAC14-204ENST00000563662 KDM3BQ7LBC6 1761 aa12.94□□□□□ -0.34
VAC14-204ENST00000563662 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
VAC14-204ENST00000563662 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
VAC14-204ENST00000563662 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
VAC14-204ENST00000563662 ZNF277Q9NRM2 450 aaPredicted RBP12.94□□□□□ -0.34
VAC14-204ENST00000563662 ATP6V0A2Q9Y487 856 aa12.94□□□□□ -0.34
VAC14-204ENST00000563662 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
VAC14-204ENST00000563662 ABCC12Q96J65 1359 aa12.94□□□□□ -0.34
VAC14-204ENST00000563662 EIF6P56537 245 aaKnown RBP12.93□□□□□ -0.34
VAC14-204ENST00000563662 IFNLR1Q8IU57 520 aaPredicted RBP12.93□□□□□ -0.34
VAC14-204ENST00000563662 SP8Q8IXZ3 490 aa12.93□□□□□ -0.34
VAC14-204ENST00000563662 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
VAC14-204ENST00000563662 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
VAC14-204ENST00000563662 NEXNQ0ZGT2 675 aa12.92□□□□□ -0.34
VAC14-204ENST00000563662 GRAPQ13588 217 aa12.92□□□□□ -0.34
VAC14-204ENST00000563662 TWISTNBQ3B726 338 aaPredicted RBP12.92□□□□□ -0.34
VAC14-204ENST00000563662 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
VAC14-204ENST00000563662 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
VAC14-204ENST00000563662 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
VAC14-204ENST00000563662 ARFGEF1Q9Y6D6 1849 aa12.91□□□□□ -0.34
VAC14-204ENST00000563662 ATP5J2-PTCD1G3V325 749 aa12.91□□□□□ -0.34
VAC14-204ENST00000563662 DDNO94850 711 aaPredicted RBP12.91□□□□□ -0.34
VAC14-204ENST00000563662 SF3B3Q15393 1217 aaKnown RBP12.91□□□□□ -0.34
VAC14-204ENST00000563662 LARGE2Q8N3Y3 721 aa12.91□□□□□ -0.34
VAC14-204ENST00000563662 FAM89AQ96GI7 184 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms