RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 CICQ96RK0 1608 aaPredicted RBP12.17□□□□□ -0.46
UBFD1-202ENST00000563366 GNAI3P08754 354 aa12.16□□□□□ -0.46
UBFD1-202ENST00000563366 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
UBFD1-202ENST00000563366 SLC4A10Q6U841 1118 aa12.16□□□□□ -0.46
UBFD1-202ENST00000563366 G2E3Q7L622 706 aa12.16□□□□□ -0.46
UBFD1-202ENST00000563366 NECTIN2Q92692 538 aa12.16□□□□□ -0.46
UBFD1-202ENST00000563366 TEX13AQ9BXU3 409 aaPredicted RBP12.16□□□□□ -0.46
UBFD1-202ENST00000563366 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
UBFD1-202ENST00000563366 IBTKQ9P2D0 1353 aaPredicted RBP12.16□□□□□ -0.46
UBFD1-202ENST00000563366 BCL9O00512 1426 aa12.15□□□□□ -0.46
UBFD1-202ENST00000563366 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
UBFD1-202ENST00000563366 MEX3CQ5U5Q3 659 aaKnown RBP12.15□□□□□ -0.46
UBFD1-202ENST00000563366 RPAP2Q8IXW5 612 aaPredicted RBP12.15□□□□□ -0.46
UBFD1-202ENST00000563366 GCC1Q96CN9 775 aa12.15□□□□□ -0.46
UBFD1-202ENST00000563366 THSD7AQ9UPZ6 1657 aa12.15□□□□□ -0.46
UBFD1-202ENST00000563366 ARFGEF2Q9Y6D5 1785 aa12.15□□□□□ -0.46
UBFD1-202ENST00000563366 ZNF831Q5JPB2 1677 aa12.14□□□□□ -0.47
UBFD1-202ENST00000563366 GPR37O15354 613 aa12.14□□□□□ -0.47
UBFD1-202ENST00000563366 IGHDP01880 384 aa12.14□□□□□ -0.47
UBFD1-202ENST00000563366 DNAAF4Q8WXU2 420 aa12.14□□□□□ -0.47
UBFD1-202ENST00000563366 SRCIN1Q9C0H9 1055 aa12.14□□□□□ -0.47
UBFD1-202ENST00000563366 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
UBFD1-202ENST00000563366 HMMRO75330 724 aa12.13□□□□□ -0.47
UBFD1-202ENST00000563366 PHF14O94880 888 aa12.13□□□□□ -0.47
UBFD1-202ENST00000563366 HSPA1LP34931 641 aa12.13□□□□□ -0.47
UBFD1-202ENST00000563366 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
UBFD1-202ENST00000563366 SMC5Q8IY18 1101 aa12.13□□□□□ -0.47
UBFD1-202ENST00000563366 AK7Q96M32 723 aa12.13□□□□□ -0.47
UBFD1-202ENST00000563366 PHAXQ9H814 394 aaKnown RBP12.13□□□□□ -0.47
UBFD1-202ENST00000563366 USP21Q9UK80 565 aa12.13□□□□□ -0.47
UBFD1-202ENST00000563366 KAT6BQ8WYB5 2073 aa12.13□□□□□ -0.47
UBFD1-202ENST00000563366 AFDNP55196 1824 aaKnown RBP12.13□□□□□ -0.47
UBFD1-202ENST00000563366 F6X3S4 739 aa12.12□□□□□ -0.47
UBFD1-202ENST00000563366 GNAI2P04899 355 aa12.12□□□□□ -0.47
UBFD1-202ENST00000563366 EPAS1Q99814 870 aa12.12□□□□□ -0.47
UBFD1-202ENST00000563366 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
UBFD1-202ENST00000563366 ADCY9O60503 1353 aa12.11□□□□□ -0.47
UBFD1-202ENST00000563366 PI4KAP2A4QPH2 592 aa12.11□□□□□ -0.47
UBFD1-202ENST00000563366 ALDH1L1O75891 902 aa12.11□□□□□ -0.47
UBFD1-202ENST00000563366 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
UBFD1-202ENST00000563366 ANKRD44Q8N8A2 993 aa12.11□□□□□ -0.47
UBFD1-202ENST00000563366 PI4KAP1Q8N8J0 262 aa12.11□□□□□ -0.47
UBFD1-202ENST00000563366 TJP1Q07157 1748 aa12.11□□□□□ -0.47
UBFD1-202ENST00000563366 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
UBFD1-202ENST00000563366 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
UBFD1-202ENST00000563366 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
UBFD1-202ENST00000563366 PIGBQ92521 554 aa12.1□□□□□ -0.47
UBFD1-202ENST00000563366 MEIS3Q99687 375 aa12.1□□□□□ -0.47
UBFD1-202ENST00000563366 NHSQ6T4R5 1651 aa12.1□□□□□ -0.47
UBFD1-202ENST00000563366 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
UBFD1-202ENST00000563366 PTCD1O75127 700 aaKnown RBP12.09□□□□□ -0.47
UBFD1-202ENST00000563366 STARD3NLO95772 234 aa12.09□□□□□ -0.47
UBFD1-202ENST00000563366 HOXB3P14651 431 aaPredicted RBP12.09□□□□□ -0.47
UBFD1-202ENST00000563366 BEND3Q5T5X7 828 aa12.09□□□□□ -0.47
UBFD1-202ENST00000563366 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
UBFD1-202ENST00000563366 TRPC5Q9UL62 973 aaPredicted RBP12.09□□□□□ -0.47
UBFD1-202ENST00000563366 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
UBFD1-202ENST00000563366 USP16Q9Y5T5 823 aa12.09□□□□□ -0.47
UBFD1-202ENST00000563366 GNPATO15228 680 aa12.08□□□□□ -0.48
UBFD1-202ENST00000563366 MYL6BP14649 208 aa12.08□□□□□ -0.48
UBFD1-202ENST00000563366 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
UBFD1-202ENST00000563366 HIC1Q14526 733 aa12.08□□□□□ -0.48
UBFD1-202ENST00000563366 FAM98CQ17RN3 349 aaKnown RBP12.08□□□□□ -0.48
UBFD1-202ENST00000563366 PROSER3Q2NL68 480 aa12.08□□□□□ -0.48
UBFD1-202ENST00000563366 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
UBFD1-202ENST00000563366 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
UBFD1-202ENST00000563366 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
UBFD1-202ENST00000563366 SYTL4Q96C24 671 aaPredicted RBP12.08□□□□□ -0.48
UBFD1-202ENST00000563366 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
UBFD1-202ENST00000563366 ATG3Q9NT62 314 aa12.08□□□□□ -0.48
UBFD1-202ENST00000563366 ATRNO75882 1429 aa12.08□□□□□ -0.48
UBFD1-202ENST00000563366 AFF2P51816 1311 aa12.08□□□□□ -0.48
UBFD1-202ENST00000563366 RREB1Q92766 1687 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 MAP3K7O43318 606 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 ANXA1P04083 346 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 MARCH10Q8NA82 808 aaPredicted RBP12.07□□□□□ -0.48
UBFD1-202ENST00000563366 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 XAGE3Q8WTP9 111 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 C1orf115Q9H7X2 142 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 PCDHGA10Q9Y5H3 936 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 ANKRD36CQ5JPF3 1778 aa12.07□□□□□ -0.48
UBFD1-202ENST00000563366 COL5A3P25940 1745 aaPredicted RBP12.06□□□□□ -0.48
UBFD1-202ENST00000563366 A0A0G2JS52 829 aa12.06□□□□□ -0.48
UBFD1-202ENST00000563366 NUDT7P0C024 238 aa12.06□□□□□ -0.48
UBFD1-202ENST00000563366 RGS3P49796 1198 aa12.06□□□□□ -0.48
UBFD1-202ENST00000563366 MYT1Q01538 1121 aa12.06□□□□□ -0.48
UBFD1-202ENST00000563366 NUCB1Q02818 461 aa12.06□□□□□ -0.48
UBFD1-202ENST00000563366 AIMP1Q12904 312 aaKnown RBP12.06□□□□□ -0.48
UBFD1-202ENST00000563366 ARSIQ5FYB1 569 aa12.06□□□□□ -0.48
UBFD1-202ENST00000563366 COPS6Q7L5N1 327 aa12.06□□□□□ -0.48
UBFD1-202ENST00000563366 LRP10Q7Z4F1 713 aa12.06□□□□□ -0.48
UBFD1-202ENST00000563366 GJD4Q96KN9 370 aaPredicted RBP12.06□□□□□ -0.48
UBFD1-202ENST00000563366 METTL22Q9BUU2 404 aaPredicted RBP12.06□□□□□ -0.48
UBFD1-202ENST00000563366 USP44Q9H0E7 712 aa12.06□□□□□ -0.48
UBFD1-202ENST00000563366 C9orf78Q9NZ63 289 aaPredicted RBP12.06□□□□□ -0.48
UBFD1-202ENST00000563366 ASAP1Q9ULH1 1129 aa12.06□□□□□ -0.48
UBFD1-202ENST00000563366 BTAF1O14981 1849 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms