RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
SNX29-202ENST00000563308 CEMIPQ8WUJ3 1361 aa13.54□□□□□ -0.24
SNX29-202ENST00000563308 TRIOBPQ9H2D6 2365 aa13.53□□□□□ -0.24
SNX29-202ENST00000563308 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
SNX29-202ENST00000563308 CCDC24Q8N4L8 307 aa13.53□□□□□ -0.24
SNX29-202ENST00000563308 CFAP53Q96M91 514 aa13.53□□□□□ -0.24
SNX29-202ENST00000563308 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
SNX29-202ENST00000563308 COL15A1P39059 1388 aa13.53□□□□□ -0.24
SNX29-202ENST00000563308 SRGNP10124 158 aa13.52□□□□□ -0.25
SNX29-202ENST00000563308 SCNN1DP51172 638 aa13.52□□□□□ -0.25
SNX29-202ENST00000563308 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
SNX29-202ENST00000563308 CNBD1Q8NA66 436 aa13.52□□□□□ -0.25
SNX29-202ENST00000563308 ZNF296Q8WUU4 475 aaPredicted RBP13.52□□□□□ -0.25
SNX29-202ENST00000563308 ZNF496Q96IT1 587 aaPredicted RBP13.52□□□□□ -0.25
SNX29-202ENST00000563308 PRR5LQ6MZQ0 368 aa13.51□□□□□ -0.25
SNX29-202ENST00000563308 ZNF790Q6PG37 636 aa13.51□□□□□ -0.25
SNX29-202ENST00000563308 MPNDQ8N594 471 aa13.51□□□□□ -0.25
SNX29-202ENST00000563308 BCL2L12Q9HB09 334 aa13.51□□□□□ -0.25
SNX29-202ENST00000563308 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
SNX29-202ENST00000563308 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
SNX29-202ENST00000563308 KCNQ3O43525 872 aa13.5□□□□□ -0.25
SNX29-202ENST00000563308 U2AF1L5P0DN76 240 aaPredicted RBP13.5□□□□□ -0.25
SNX29-202ENST00000563308 U2AF1Q01081 240 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNX29-202ENST00000563308 TEFQ10587 303 aa13.5□□□□□ -0.25
SNX29-202ENST00000563308 CSRNP1Q96S65 589 aa13.5□□□□□ -0.25
SNX29-202ENST00000563308 COL25A1Q9BXS0 654 aaPredicted RBP13.5□□□□□ -0.25
SNX29-202ENST00000563308 ANKRD31Q8N7Z5 1873 aa13.5□□□□□ -0.25
SNX29-202ENST00000563308 COL11A2P13942 1736 aaPredicted RBP13.5□□□□□ -0.25
SNX29-202ENST00000563308 HEG1Q9ULI3 1381 aa13.49□□□□□ -0.25
SNX29-202ENST00000563308 A0A087WZG4 1122 aa13.49□□□□□ -0.25
SNX29-202ENST00000563308 FAM155AB1AL88 458 aaPredicted RBP13.49□□□□□ -0.25
SNX29-202ENST00000563308 EIF5P55010 431 aaKnown RBP13.49□□□□□ -0.25
SNX29-202ENST00000563308 NPM2Q86SE8 214 aaKnown RBP13.49□□□□□ -0.25
SNX29-202ENST00000563308 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
SNX29-202ENST00000563308 ZC3H15Q8WU90 426 aaKnown RBP13.49□□□□□ -0.25
SNX29-202ENST00000563308 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
SNX29-202ENST00000563308 ARFGEF2Q9Y6D5 1785 aa13.49□□□□□ -0.25
SNX29-202ENST00000563308 H0YGN5 161 aa13.48□□□□□ -0.25
SNX29-202ENST00000563308 NPR1P16066 1061 aa13.48□□□□□ -0.25
SNX29-202ENST00000563308 CANXP27824 592 aaKnown RBP13.48□□□□□ -0.25
SNX29-202ENST00000563308 ANKRD13DQ6ZTN6 518 aa13.48□□□□□ -0.25
SNX29-202ENST00000563308 LARGE2Q8N3Y3 721 aa13.48□□□□□ -0.25
SNX29-202ENST00000563308 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
SNX29-202ENST00000563308 SETDB2Q96T68 719 aa13.48□□□□□ -0.25
SNX29-202ENST00000563308 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
SNX29-202ENST00000563308 GBA2Q9HCG7 927 aaPredicted RBP13.48□□□□□ -0.25
SNX29-202ENST00000563308 STARD3NLO95772 234 aa13.47□□□□□ -0.25
SNX29-202ENST00000563308 MCM10Q7L590 875 aa13.47□□□□□ -0.25
SNX29-202ENST00000563308 C7orf43Q8WVR3 580 aa13.47□□□□□ -0.25
SNX29-202ENST00000563308 GPRC5DQ9NZD1 345 aa13.47□□□□□ -0.25
SNX29-202ENST00000563308 TBC1D8O95759 1140 aa13.46□□□□□ -0.25
SNX29-202ENST00000563308 TBC1D9BQ66K14 1250 aa13.46□□□□□ -0.25
SNX29-202ENST00000563308 FMNL2Q96PY5 1086 aa13.46□□□□□ -0.25
SNX29-202ENST00000563308 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.25
SNX29-202ENST00000563308 PRDM6Q9NQX0 595 aa13.46□□□□□ -0.25
SNX29-202ENST00000563308 RBM27Q9P2N5 1060 aaKnown RBP13.46□□□□□ -0.25
SNX29-202ENST00000563308 BCORQ6W2J9 1755 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 A0A0C4DFX4 3053 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 BTBD11A6QL63 1104 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 FKTNO75072 461 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 A1BGP04217 495 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 SLC10A3P09131 477 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 EN2P19622 333 aaPredicted RBP13.45□□□□□ -0.26
SNX29-202ENST00000563308 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 DCTN1Q14203 1278 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 USP48Q86UV5 1035 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 NIM1KQ8IY84 436 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 PSMD1Q99460 953 aa13.45□□□□□ -0.26
SNX29-202ENST00000563308 PRAMEF22A3QJZ6 481 aa13.44□□□□□ -0.26
SNX29-202ENST00000563308 GPR25O00155 361 aa13.44□□□□□ -0.26
SNX29-202ENST00000563308 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
SNX29-202ENST00000563308 IL6STP40189 918 aaPredicted RBP13.44□□□□□ -0.26
SNX29-202ENST00000563308 BCL2L13Q9BXK5 485 aa13.44□□□□□ -0.26
SNX29-202ENST00000563308 PLEKHF1Q96S99 279 aa13.43□□□□□ -0.26
SNX29-202ENST00000563308 PGAP2Q9UHJ9 254 aa13.43□□□□□ -0.26
SNX29-202ENST00000563308 TBC1D2BQ9UPU7 963 aa13.43□□□□□ -0.26
SNX29-202ENST00000563308 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
SNX29-202ENST00000563308 NOM1Q5C9Z4 860 aaKnown RBP13.42□□□□□ -0.26
SNX29-202ENST00000563308 CC2D2BQ6DHV5 1058 aa13.42□□□□□ -0.26
SNX29-202ENST00000563308 ZNF330Q9Y3S2 320 aaPredicted RBP13.42□□□□□ -0.26
SNX29-202ENST00000563308 PAPPA2Q9BXP8 1791 aa13.42□□□□□ -0.26
SNX29-202ENST00000563308 CAMTA2O94983 1202 aa13.41□□□□□ -0.26
SNX29-202ENST00000563308 OLFM4Q6UX06 510 aa13.41□□□□□ -0.26
SNX29-202ENST00000563308 RTF1Q92541 710 aaKnown RBP13.41□□□□□ -0.26
SNX29-202ENST00000563308 TRIM17Q9Y577 477 aa13.41□□□□□ -0.26
SNX29-202ENST00000563308 SZT2Q5T011 3432 aa13.41□□□□□ -0.26
SNX29-202ENST00000563308 NBPF26B4DH59 902 aa13.4□□□□□ -0.26
SNX29-202ENST00000563308 COL9A1P20849 921 aa13.4□□□□□ -0.26
SNX29-202ENST00000563308 PIP4K2AP48426 406 aaPredicted RBP13.4□□□□□ -0.26
SNX29-202ENST00000563308 TAF7Q15545 349 aaPredicted RBP13.4□□□□□ -0.26
SNX29-202ENST00000563308 GRIPAP1Q4V328 841 aa13.4□□□□□ -0.26
SNX29-202ENST00000563308 NBPF10Q6P3W6 841 aaKnown RBP13.4□□□□□ -0.26
SNX29-202ENST00000563308 KRT26Q7Z3Y9 468 aa13.4□□□□□ -0.26
SNX29-202ENST00000563308 DPF3Q92784 378 aa13.4□□□□□ -0.26
SNX29-202ENST00000563308 TMX4Q9H1E5 349 aaPredicted RBP13.4□□□□□ -0.26
SNX29-202ENST00000563308 MIS18AQ9NYP9 233 aa13.4□□□□□ -0.26
SNX29-202ENST00000563308 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
SNX29-202ENST00000563308 CEP290O15078 2479 aa13.39□□□□□ -0.27
SNX29-202ENST00000563308 H7C1D1 291 aa13.39□□□□□ -0.27
SNX29-202ENST00000563308 SNRPA1P09661 255 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms