RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 GRIPAP1Q4V328 841 aa15.82■□□□□ 0.12
NSMCE1-204ENST00000563273 CC2D2BQ6DHV5 1058 aa15.82■□□□□ 0.12
NSMCE1-204ENST00000563273 ANKRD13DQ6ZTN6 518 aa15.82■□□□□ 0.12
NSMCE1-204ENST00000563273 NLRP10Q86W26 655 aa15.82■□□□□ 0.12
NSMCE1-204ENST00000563273 RTKN2Q8IZC4 609 aa15.82■□□□□ 0.12
NSMCE1-204ENST00000563273 CRAMP1Q96RY5 1269 aa15.82■□□□□ 0.12
NSMCE1-204ENST00000563273 NUP98P52948 1817 aa15.82■□□□□ 0.12
NSMCE1-204ENST00000563273 TRIM28Q13263 835 aaKnown RBP15.81■□□□□ 0.12
NSMCE1-204ENST00000563273 C8orf58Q8NAV2 365 aa15.81■□□□□ 0.12
NSMCE1-204ENST00000563273 RPGRQ92834 1020 aaKnown RBP15.81■□□□□ 0.12
NSMCE1-204ENST00000563273 ARFGEF2Q9Y6D5 1785 aa15.81■□□□□ 0.12
NSMCE1-204ENST00000563273 GLTPD2A6NH11 291 aa15.8■□□□□ 0.12
NSMCE1-204ENST00000563273 TOMM70O94826 608 aa15.8■□□□□ 0.12
NSMCE1-204ENST00000563273 CCDC30Q5VVM6 783 aa15.8■□□□□ 0.12
NSMCE1-204ENST00000563273 WDR63Q8IWG1 891 aa15.8■□□□□ 0.12
NSMCE1-204ENST00000563273 NLRP3Q96P20 1036 aa15.8■□□□□ 0.12
NSMCE1-204ENST00000563273 ISCA1Q9BUE6 129 aa15.8■□□□□ 0.12
NSMCE1-204ENST00000563273 NMRK2Q9NPI5 230 aa15.8■□□□□ 0.12
NSMCE1-204ENST00000563273 SNED1Q8TER0 1413 aa15.79■□□□□ 0.12
NSMCE1-204ENST00000563273 FKBP4Q02790 459 aaKnown RBP eCLIP15.79■□□□□ 0.12
NSMCE1-204ENST00000563273 RBM17Q96I25 401 aaKnown RBP15.79■□□□□ 0.12
NSMCE1-204ENST00000563273 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
NSMCE1-204ENST00000563273 SLX4Q8IY92 1834 aa15.78■□□□□ 0.12
NSMCE1-204ENST00000563273 SH3TC1Q8TE82 1336 aa15.78■□□□□ 0.12
NSMCE1-204ENST00000563273 PSMD1Q99460 953 aa15.78■□□□□ 0.12
NSMCE1-204ENST00000563273 TNRC6CQ9HCJ0 1690 aaKnown RBP15.78■□□□□ 0.12
NSMCE1-204ENST00000563273 SBF1O95248 1867 aa15.78■□□□□ 0.12
NSMCE1-204ENST00000563273 FER1L6Q2WGJ9 1857 aa15.78■□□□□ 0.12
NSMCE1-204ENST00000563273 GOLGA2Q08379 1002 aa15.77■□□□□ 0.12
NSMCE1-204ENST00000563273 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
NSMCE1-204ENST00000563273 RBM46Q8TBY0 533 aaKnown RBP15.77■□□□□ 0.12
NSMCE1-204ENST00000563273 TRMT112Q9UI30 125 aaKnown RBP15.77■□□□□ 0.12
NSMCE1-204ENST00000563273 SENP3-EIF4A1A0A087X0R7 540 aa15.76■□□□□ 0.11
NSMCE1-204ENST00000563273 ELL2O00472 640 aaPredicted RBP15.76■□□□□ 0.11
NSMCE1-204ENST00000563273 TSPYL6Q8N831 410 aa15.76■□□□□ 0.11
NSMCE1-204ENST00000563273 TSR2Q969E8 191 aaKnown RBP15.76■□□□□ 0.11
NSMCE1-204ENST00000563273 DDX58O95786 925 aaKnown RBP15.75■□□□□ 0.11
NSMCE1-204ENST00000563273 HSPA6P17066 643 aa15.75■□□□□ 0.11
NSMCE1-204ENST00000563273 C3orf67Q6ZVT6 689 aa15.75■□□□□ 0.11
NSMCE1-204ENST00000563273 RIC3Q7Z5B4 369 aa15.75■□□□□ 0.11
NSMCE1-204ENST00000563273 PPEF1O14829 653 aaPredicted RBP15.74■□□□□ 0.11
NSMCE1-204ENST00000563273 BBOX1O75936 387 aa15.74■□□□□ 0.11
NSMCE1-204ENST00000563273 HSP90B1P14625 803 aaKnown RBP15.74■□□□□ 0.11
NSMCE1-204ENST00000563273 VEGFAP15692 232 aaPredicted RBP15.74■□□□□ 0.11
NSMCE1-204ENST00000563273 FSTL1Q12841 308 aa15.74■□□□□ 0.11
NSMCE1-204ENST00000563273 TWISTNBQ3B726 338 aaPredicted RBP15.74■□□□□ 0.11
NSMCE1-204ENST00000563273 C16orf71Q8IYS4 520 aaPredicted RBP15.74■□□□□ 0.11
NSMCE1-204ENST00000563273 PHAXQ9H814 394 aaKnown RBP15.74■□□□□ 0.11
NSMCE1-204ENST00000563273 RRAGCQ9HB90 399 aa15.74■□□□□ 0.11
NSMCE1-204ENST00000563273 ANKRD36CQ5JPF3 1778 aa15.74■□□□□ 0.11
NSMCE1-204ENST00000563273 FANCIQ9NVI1 1328 aa15.73■□□□□ 0.11
NSMCE1-204ENST00000563273 HCLS1P14317 486 aaPredicted RBP15.73■□□□□ 0.11
NSMCE1-204ENST00000563273 OLFM4Q6UX06 510 aa15.73■□□□□ 0.11
NSMCE1-204ENST00000563273 TMC4Q7Z404 712 aa15.73■□□□□ 0.11
NSMCE1-204ENST00000563273 SYNE4Q8N205 404 aa15.73■□□□□ 0.11
NSMCE1-204ENST00000563273 CCDC191Q8NCU4 936 aa15.73■□□□□ 0.11
NSMCE1-204ENST00000563273 STK31Q9BXU1 1019 aa15.73■□□□□ 0.11
NSMCE1-204ENST00000563273 VPS33BQ9H267 617 aa15.73■□□□□ 0.11
NSMCE1-204ENST00000563273 ATP6V0A2Q9Y487 856 aa15.73■□□□□ 0.11
NSMCE1-204ENST00000563273 ABCC4O15439 1325 aa15.72■□□□□ 0.11
NSMCE1-204ENST00000563273 ATP5J2-PTCD1G3V325 749 aa15.72■□□□□ 0.11
NSMCE1-204ENST00000563273 IARSP41252 1262 aaKnown RBP15.72■□□□□ 0.11
NSMCE1-204ENST00000563273 SF3B3Q15393 1217 aaKnown RBP15.72■□□□□ 0.11
NSMCE1-204ENST00000563273 ZBTB38Q8NAP3 1195 aaPredicted RBP15.72■□□□□ 0.11
NSMCE1-204ENST00000563273 METTL22Q9BUU2 404 aaPredicted RBP15.72■□□□□ 0.11
NSMCE1-204ENST00000563273 TMX4Q9H1E5 349 aaPredicted RBP15.72■□□□□ 0.11
NSMCE1-204ENST00000563273 ZNF277Q9NRM2 450 aaPredicted RBP15.72■□□□□ 0.11
NSMCE1-204ENST00000563273 TIAM2Q8IVF5 1701 aa15.71■□□□□ 0.11
NSMCE1-204ENST00000563273 GRAPQ13588 217 aa15.71■□□□□ 0.11
NSMCE1-204ENST00000563273 DDX46Q7L014 1031 aaKnown RBP15.71■□□□□ 0.11
NSMCE1-204ENST00000563273 SP8Q8IXZ3 490 aa15.71■□□□□ 0.11
NSMCE1-204ENST00000563273 FAM9BQ8IZU0 186 aa15.71■□□□□ 0.11
NSMCE1-204ENST00000563273 GRAPLQ8TC17 118 aaPredicted RBP15.71■□□□□ 0.11
NSMCE1-204ENST00000563273 FAM89AQ96GI7 184 aa15.71■□□□□ 0.11
NSMCE1-204ENST00000563273 L3MBTL3Q96JM7 780 aaPredicted RBP15.71■□□□□ 0.11
NSMCE1-204ENST00000563273 RTFDC1Q9BY42 306 aaPredicted RBP15.71■□□□□ 0.11
NSMCE1-204ENST00000563273 POTECB2RU33 542 aa15.7■□□□□ 0.1
NSMCE1-204ENST00000563273 FZD9O00144 591 aa15.7■□□□□ 0.1
NSMCE1-204ENST00000563273 KSR2Q6VAB6 950 aa15.7■□□□□ 0.1
NSMCE1-204ENST00000563273 MYH16Q9H6N6 1097 aa15.7■□□□□ 0.1
NSMCE1-204ENST00000563273 CEP350Q5VT06 3117 aa15.7■□□□□ 0.1
NSMCE1-204ENST00000563273 WDR90Q96KV7 1748 aa15.7■□□□□ 0.1
NSMCE1-204ENST00000563273 ZNF521Q96K83 1311 aa15.69■□□□□ 0.1
NSMCE1-204ENST00000563273 IRS4O14654 1257 aaPredicted RBP15.69■□□□□ 0.1
NSMCE1-204ENST00000563273 PCCAP05165 728 aaPredicted RBP15.69■□□□□ 0.1
NSMCE1-204ENST00000563273 APLP1P51693 650 aa15.69■□□□□ 0.1
NSMCE1-204ENST00000563273 SMC1BQ8NDV3 1235 aa15.69■□□□□ 0.1
NSMCE1-204ENST00000563273 SUPT20HQ8NEM7 779 aa15.69■□□□□ 0.1
NSMCE1-204ENST00000563273 MYD88Q99836 296 aa15.69■□□□□ 0.1
NSMCE1-204ENST00000563273 CWC25Q9NXE8 425 aaPredicted RBP15.69■□□□□ 0.1
NSMCE1-204ENST00000563273 DICER1Q9UPY3 1922 aaKnown RBP15.68■□□□□ 0.1
NSMCE1-204ENST00000563273 PI4KAP2A4QPH2 592 aa15.68■□□□□ 0.1
NSMCE1-204ENST00000563273 IQCA1LA6NCM1 817 aa15.68■□□□□ 0.1
NSMCE1-204ENST00000563273 VAMP4O75379 141 aa15.68■□□□□ 0.1
NSMCE1-204ENST00000563273 PI4KAP1Q8N8J0 262 aa15.68■□□□□ 0.1
NSMCE1-204ENST00000563273 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
NSMCE1-204ENST00000563273 MAP3K2Q9Y2U5 619 aa15.68■□□□□ 0.1
NSMCE1-204ENST00000563273 DDNO94850 711 aaPredicted RBP15.67■□□□□ 0.1
NSMCE1-204ENST00000563273 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
NSMCE1-204ENST00000563273 NEXNQ0ZGT2 675 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms