RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 KIAA2012Q0VF49 1180 aa15.63■□□□□ 0.09
USB1-207ENST00000563149 PROSER3Q2NL68 480 aa15.63■□□□□ 0.09
USB1-207ENST00000563149 TSGA10IPQ3SY00 556 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 EAF2Q96CJ1 260 aaPredicted RBP15.62■□□□□ 0.09
USB1-207ENST00000563149 KAZALD1Q96I82 304 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 MAP7D2Q96T17 732 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 FUCA2Q9BTY2 467 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 BICC1Q9H694 974 aaKnown RBP15.62■□□□□ 0.09
USB1-207ENST00000563149 HMG20BQ9P0W2 317 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 JCADQ9P266 1359 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 SLC27A2O14975 620 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 CPA1P15085 419 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 KCNJ4P48050 445 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 NEXNQ0ZGT2 675 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 NMIQ13287 307 aaPredicted RBP15.62■□□□□ 0.09
USB1-207ENST00000563149 ME3Q16798 604 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 SASS6Q6UVJ0 657 aa15.62■□□□□ 0.09
USB1-207ENST00000563149 PLEKHG2Q9H7P9 1386 aa15.61■□□□□ 0.09
USB1-207ENST00000563149 MST1RQ04912 1400 aa15.61■□□□□ 0.09
USB1-207ENST00000563149 FIBPO43427 364 aa15.61■□□□□ 0.09
USB1-207ENST00000563149 PDIA6Q15084 440 aa15.61■□□□□ 0.09
USB1-207ENST00000563149 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
USB1-207ENST00000563149 ELP1O95163 1332 aa15.61■□□□□ 0.09
USB1-207ENST00000563149 KDM4AO75164 1064 aa15.6■□□□□ 0.09
USB1-207ENST00000563149 DNM1Q05193 864 aaKnown RBP15.6■□□□□ 0.09
USB1-207ENST00000563149 BLOC1S2Q6QNY1 142 aa15.6■□□□□ 0.09
USB1-207ENST00000563149 RIC3Q7Z5B4 369 aa15.6■□□□□ 0.09
USB1-207ENST00000563149 LARP6Q9BRS8 491 aaKnown RBP15.6■□□□□ 0.09
USB1-207ENST00000563149 RFX7Q2KHR2 1363 aa15.6■□□□□ 0.09
USB1-207ENST00000563149 MED23Q9ULK4 1368 aa15.6■□□□□ 0.09
USB1-207ENST00000563149 TRPM3Q9HCF6 1732 aaPredicted RBP15.6■□□□□ 0.09
USB1-207ENST00000563149 DYNC1I1O14576 645 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 TPM3P06753 285 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 KRT85P78386 507 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 ST3GAL1Q11201 340 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 LARP1BQ659C4 914 aaKnown RBP15.59■□□□□ 0.09
USB1-207ENST00000563149 CCDC8Q9H0W5 538 aaPredicted RBP15.59■□□□□ 0.09
USB1-207ENST00000563149 COL15A1P39059 1388 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 ABCC6O95255 1503 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 ADCY5O95622 1261 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 IGKV5-2P06315 115 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 RPS6KB1P23443 525 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 KRT32Q14532 448 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 FAM227BQ96M60 508 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 FSD1Q9BTV5 496 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 USP25Q9UHP3 1055 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 TPCN1Q9ULQ1 816 aa15.59■□□□□ 0.09
USB1-207ENST00000563149 NPHP4O75161 1426 aaPredicted RBP15.59■□□□□ 0.09
USB1-207ENST00000563149 PRAMEF22A3QJZ6 481 aa15.58■□□□□ 0.08
USB1-207ENST00000563149 VPS37CA5D8V6 355 aaPredicted RBP15.58■□□□□ 0.08
USB1-207ENST00000563149 NEURL1BA8MQ27 555 aa15.58■□□□□ 0.08
USB1-207ENST00000563149 HCLS1P14317 486 aaPredicted RBP15.58■□□□□ 0.08
USB1-207ENST00000563149 ZNF790Q6PG37 636 aa15.58■□□□□ 0.08
USB1-207ENST00000563149 MTERF4Q7Z6M4 381 aaKnown RBP15.58■□□□□ 0.08
USB1-207ENST00000563149 PIBF1Q8WXW3 757 aa15.58■□□□□ 0.08
USB1-207ENST00000563149 METTL22Q9BUU2 404 aaPredicted RBP15.58■□□□□ 0.08
USB1-207ENST00000563149 COPRSQ9NQ92 184 aa15.58■□□□□ 0.08
USB1-207ENST00000563149 KIF1AQ12756 1690 aa15.58■□□□□ 0.08
USB1-207ENST00000563149 SCN11AQ9UI33 1791 aa15.58■□□□□ 0.08
USB1-207ENST00000563149 UQCRHLA0A096LP55 91 aa15.57■□□□□ 0.08
USB1-207ENST00000563149 UQCRHP07919 91 aa15.57■□□□□ 0.08
USB1-207ENST00000563149 GCKRQ14397 625 aa15.57■□□□□ 0.08
USB1-207ENST00000563149 USPL1Q5W0Q7 1092 aa15.57■□□□□ 0.08
USB1-207ENST00000563149 BOLA2Q9H3K6 86 aa15.57■□□□□ 0.08
USB1-207ENST00000563149 SLC52A2Q9HAB3 445 aa15.57■□□□□ 0.08
USB1-207ENST00000563149 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.57■□□□□ 0.08
USB1-207ENST00000563149 A0A0D9SFI3 127 aa15.57■□□□□ 0.08
USB1-207ENST00000563149 CCDC192P0DO97 292 aa15.57■□□□□ 0.08
USB1-207ENST00000563149 ATP5JP18859 108 aa15.57■□□□□ 0.08
USB1-207ENST00000563149 AIMP1Q12904 312 aaKnown RBP15.57■□□□□ 0.08
USB1-207ENST00000563149 TICAM2Q86XR7 235 aa15.57■□□□□ 0.08
USB1-207ENST00000563149 SCAND2PQ9GZW5 306 aaPredicted RBP15.57■□□□□ 0.08
USB1-207ENST00000563149 ERBB3P21860 1342 aa15.56■□□□□ 0.08
USB1-207ENST00000563149 NECAB1Q8N987 351 aa15.56■□□□□ 0.08
USB1-207ENST00000563149 ORAI2Q96SN7 254 aa15.56■□□□□ 0.08
USB1-207ENST00000563149 GIMAP6Q6P9H5 292 aa15.55■□□□□ 0.08
USB1-207ENST00000563149 KRT28Q7Z3Y7 464 aa15.55■□□□□ 0.08
USB1-207ENST00000563149 RAPGEF4Q8WZA2 1011 aa15.55■□□□□ 0.08
USB1-207ENST00000563149 PRIMPOLQ96LW4 560 aa15.55■□□□□ 0.08
USB1-207ENST00000563149 AXIN2Q9Y2T1 843 aa15.55■□□□□ 0.08
USB1-207ENST00000563149 C5P01031 1676 aa15.55■□□□□ 0.08
USB1-207ENST00000563149 NPHP3Q7Z494 1330 aa15.55■□□□□ 0.08
USB1-207ENST00000563149 TAF5LO75529 589 aa15.54■□□□□ 0.08
USB1-207ENST00000563149 TLR7Q9NYK1 1049 aaKnown RBP15.54■□□□□ 0.08
USB1-207ENST00000563149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.54■□□□□ 0.08
USB1-207ENST00000563149 GOLGA6L6A8MZA4 724 aa15.54■□□□□ 0.08
USB1-207ENST00000563149 TATP17735 454 aaPredicted RBP15.54■□□□□ 0.08
USB1-207ENST00000563149 HMGN5P82970 282 aaKnown RBP15.54■□□□□ 0.08
USB1-207ENST00000563149 TOB2Q14106 344 aaPredicted RBP15.54■□□□□ 0.08
USB1-207ENST00000563149 NOLC1Q14978 699 aaKnown RBP eCLIP15.54■□□□□ 0.08
USB1-207ENST00000563149 TTC6Q86TZ1 520 aa15.54■□□□□ 0.08
USB1-207ENST00000563149 XAGE3Q8WTP9 111 aa15.54■□□□□ 0.08
USB1-207ENST00000563149 RBM33Q96EV2 1170 aaKnown RBP15.54■□□□□ 0.08
USB1-207ENST00000563149 MYD88Q99836 296 aa15.54■□□□□ 0.08
USB1-207ENST00000563149 PHKG2P15735 406 aa15.53■□□□□ 0.08
USB1-207ENST00000563149 RFX5P48382 616 aaPredicted RBP15.53■□□□□ 0.08
USB1-207ENST00000563149 MAP3K11Q16584 847 aa15.53■□□□□ 0.08
USB1-207ENST00000563149 RABL6Q3YEC7 729 aaPredicted RBP15.53■□□□□ 0.08
USB1-207ENST00000563149 ANKRD13DQ6ZTN6 518 aa15.53■□□□□ 0.08
USB1-207ENST00000563149 COPS6Q7L5N1 327 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms